Lupeoside



Compound IDCDAMM01288
Common nameLupeoside
IUPAC name2-[6-[(3a,5a,5b,8,8,11a-hexamethyl-1-prop-1-en-2-yl-1,2,3,4,5,6,7,7a,9,10,11,11b,12,13,13a,13b-hexadecahydrocyclopenta[a]chrysen-9-yl)oxy]-4,5-dihydroxy-2-(hydroxymethyl)oxan-3-yl]oxyoxane-3,4,5-triol
Molecular formulaC41H68O10

Experimental data

Retention time15.54
Adduct[M+NH4]+
Actual mz738.515
Theoretical mz738.515
Error0.24
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.7514

Identifiers and class information

Inchi keyVTDZILAWJJXPEL-UHFFFAOYNA-N
SmilesOCC1OC(OC2CCC3(C)C(CCC4(C)C3CCC5C6C(C(=C)C)CCC6(C)CCC54C)C2(C)C)C(O)C(O)C1OC7OCC(O)C(O)C7O
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)7
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)12
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)720.982
Computed dipole moment(dipole)11.694
Total solvent accessible surface area (SASA)1027.63
Hydrophobic component of SASA (FOSA)779.931
Hydrophilic component of SASA (FISA)223.04
Pie component of the SASA (PISA)24.659
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)2114.13
Number of hydrogen bond donors (donorHB)6
Number of hydrogen bond acceptors (accptHB)17
Free energy of solvation of dipole (dip^2/V)0.064683
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0405217
Globularity descriptor (glob)0.775205
Predicted polarizability in cubic angstroms (QPpolrz)70.984
Predicted hexadecane/gas partition coefficient (QPlogPC16)20.764
Predicted octanol/gas partition coefficient (QPlogPoct)42.834
Predicted water/gas partition coefficient (QPlogPw)26.763
Predicted octanol/water partition coefficient (QPlogPo/w)3.292
Predicted aqueous solubility (QPlogS)-6.477
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.649
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.287
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)76
Predicted brain/blood partition coefficient (QPlogBB)-2.634
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)30.524
Predicted skin permeability, log Kp (QPlogKp)-4.391
PM3 calculated ionization potential (IP(ev))9.625
PM3 calculated electron affinity (EA(eV))-1.21
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)0.347
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)53.967
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)155.75
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q8TDU6GPBAR1G-protein coupled bile acid receptor 1T86273SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T86273DI0417Type 2 diabetes mellitus[ICD-11: 5A11]Q8TDU6GPBAR1

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