Aceroside III



Compound IDCDAMM01202
Common nameAceroside III
IUPAC name2-[[3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-6-[(4-hydroxy-2-oxatricyclo[13.2.2.13,7]icosa-1(17),3,5,7(20),15,18-hexaen-12-yl)oxy]oxane-3,4,5-triol
Molecular formulaC30H40O12

Experimental data

Retention time42.59
Adduct[M+H]+
Actual mz593.258
Theoretical mz593.259
Error1.98
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.2792

Identifiers and class information

Inchi keyDEIACGRTXLHUPJ-UHFFFAOYNA-N
SmilesOC1=CC=C2C=C1OC3=CC=C(C=C3)CCC(OC4OC(COC5OCC(O)(CO)C5O)C(O)C(O)C4O)CCCC2
SuperclassLignans, neolignans and related compounds
ClassLignan glycosides

Pharmacokinetic properties

Number of descriptor values(#stars)4
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)13
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)592.639
Computed dipole moment(dipole)6.618
Total solvent accessible surface area (SASA)819.661
Hydrophobic component of SASA (FOSA)343.726
Hydrophilic component of SASA (FISA)271.137
Pie component of the SASA (PISA)204.798
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1644.16
Number of hydrogen bond donors (donorHB)7
Number of hydrogen bond acceptors (accptHB)17.3
Free energy of solvation of dipole (dip^2/V)0.0266381
Index of cohesive interaction in solids (ACxDN^.5/SA)0.055842
Globularity descriptor (glob)0.821914
Predicted polarizability in cubic angstroms (QPpolrz)53.254
Predicted hexadecane/gas partition coefficient (QPlogPC16)18.255
Predicted octanol/gas partition coefficient (QPlogPoct)38.236
Predicted water/gas partition coefficient (QPlogPw)29.354
Predicted octanol/water partition coefficient (QPlogPo/w)0.338
Predicted aqueous solubility (QPlogS)-3.346
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.429
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.39
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)26.589
Predicted brain/blood partition coefficient (QPlogBB)-2.896
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)9.809
Predicted skin permeability, log Kp (QPlogKp)-4.547
PM3 calculated ionization potential (IP(ev))8.921
PM3 calculated electron affinity (EA(eV))0.064
Number of likely metabolic reactions (#metab)9
Prediction of binding to human serum albumin (QPlogKhsa)-0.66
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)15.546
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)183.164
Number of nitrogen and oxygen atoms (#NandO)12
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P14679TYRTyrosinaseT97035SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T97035DI0007Acquired hypermelanosis[ICD-11: ED60]P14679TYR
T97035DI0008Acquired hypomelanotic disorder[ICD-11: ED63]P14679TYR

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