Goniolactone F



Compound IDCDAMM01196
Common nameGoniolactone F
IUPAC name[2-[(5-hydroxy-4-oxo-2-phenyl-2,3-dihydrochromen-7-yl)oxy-phenylmethyl]-5-oxo-3,3a,6,6a-tetrahydro-2H-furo[3,2-b]furan-3-yl] acetate
Molecular formulaC30H26O9

Experimental data

Retention time0.3
Adduct[M+H]+
Actual mz531.161
Theoretical mz531.165
Error8.43
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.8851

Identifiers and class information

Inchi keyJVHLWFBWUANMQY-JCQZRNDVNA-N
SmilesO=C(OC1C2OC(=O)CC2OC1C(OC=3C=C(O)C4=C(OC(C=5C=CC=CC5)CC4=O)C3)C=6C=CC=CC6)C
SuperclassPhenylpropanoids and polyketides
ClassFlavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)530.53
Computed dipole moment(dipole)4.278
Total solvent accessible surface area (SASA)764.14
Hydrophobic component of SASA (FOSA)262.824
Hydrophilic component of SASA (FISA)190.817
Pie component of the SASA (PISA)310.5
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1496.62
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)9.95
Free energy of solvation of dipole (dip^2/V)0.0122311
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.82807
Predicted polarizability in cubic angstroms (QPpolrz)52.854
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.557
Predicted octanol/gas partition coefficient (QPlogPoct)23.717
Predicted water/gas partition coefficient (QPlogPw)13.445
Predicted octanol/water partition coefficient (QPlogPo/w)3.256
Predicted aqueous solubility (QPlogS)-4.511
Conformation-independent predicted aqueous solubility (CIQPlogS)-7.069
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.795
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)153.598
Predicted brain/blood partition coefficient (QPlogBB)-1.653
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)65.303
Predicted skin permeability, log Kp (QPlogKp)-3.366
PM3 calculated ionization potential (IP(ev))9.42
PM3 calculated electron affinity (EA(eV))0.439
Number of likely metabolic reactions (#metab)9
Prediction of binding to human serum albumin (QPlogKhsa)0.046
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)72.186
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)147.442
Number of nitrogen and oxygen atoms (#NandO)9
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P11511CYP19A1Cytochrome P450 19A1T13260SEA
P20151KLK2Kallikrein 2T01908SEA
P32418SLC8A1Sodium/calcium exchanger 1T07775SEA
Q16678CYP1B1Cytochrome P450 1B1T92521SEA
P16152CBR1Carbonyl reductase [NADPH] 1T70518SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T13260DI0062Breast cancer[ICD-11: 2C60-2C6Y]P11511CYP19A1
T13260DI0108Cushing syndrome[ICD-11: 5A70]P11511CYP19A1
T01908DI0213Innate/adaptive immunodeficiency[ICD-11: 4A00]P20151KLK2
T70518DI0037Asthma[ICD-11: CA23]P16152CBR1

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