Alvaradoin K



Compound IDCDAMM01190
Common nameAlvaradoin K
IUPAC name[6-(4,5-dihydroxy-2-methyl-10-oxo-9H-anthracen-9-yl)-2,4,5-trihydroxyoxan-3-yl] 3-methylbut-2-enoate
Molecular formulaC25H26O9

Experimental data

Retention time0.43
Adduct[2M+H]+
Actual mz941.323
Theoretical mz941.323
Error0.24
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.4698

Identifiers and class information

Inchi keyXSVRTNDEOWGZRL-PXKQZOFYNA-N
SmilesO=C(OC1C(O)OC(C(O)C1O)C2C=3C=CC=C(O)C3C(=O)C4=C(O)C=C(C=C42)C)C=C(C)C
SuperclassBenzenoids
ClassAnthracenes

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)7
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)470.475
Computed dipole moment(dipole)8.385
Total solvent accessible surface area (SASA)755.782
Hydrophobic component of SASA (FOSA)322.264
Hydrophilic component of SASA (FISA)241.18
Pie component of the SASA (PISA)192.338
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1384.66
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)10.3
Free energy of solvation of dipole (dip^2/V)0.0507817
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0236049
Globularity descriptor (glob)0.794932
Predicted polarizability in cubic angstroms (QPpolrz)46.602
Predicted hexadecane/gas partition coefficient (QPlogPC16)14.883
Predicted octanol/gas partition coefficient (QPlogPoct)26.433
Predicted water/gas partition coefficient (QPlogPw)17.482
Predicted octanol/water partition coefficient (QPlogPo/w)2.016
Predicted aqueous solubility (QPlogS)-5.161
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.409
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.767
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)51.143
Predicted brain/blood partition coefficient (QPlogBB)-2.403
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)19.893
Predicted skin permeability, log Kp (QPlogKp)-4.615
PM3 calculated ionization potential (IP(ev))9.225
PM3 calculated electron affinity (EA(eV))0.636
Number of likely metabolic reactions (#metab)10
Prediction of binding to human serum albumin (QPlogKhsa)0.055
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)69.333
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)164.518
Number of nitrogen and oxygen atoms (#NandO)9
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P63316TNNC1Troponin, cardiac muscleT12966SEA
P19429TNNI3Cardiac troponin IT20186SEA
P45379TNNT2Cardiac muscle troponin TT05887SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T12966DI0006Acquired cutaneous blood vessel malformation[ICD-11: EF20]P63316TNNC1
T12966DI0175Heart failure[ICD-11: BD10-BD1Z]P63316TNNC1

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