Neolinderatin



Compound IDCDAMM01095
Common nameNeolinderatin
IUPAC name3-phenyl-1-[2,4,6-trihydroxy-3,5-bis(3-methyl-6-propan-2-ylcyclohex-2-en-1-yl)phenyl]propan-1-one
Molecular formulaC35H46O4

Experimental data

Retention time11.4
Adduct[M+H]+
Actual mz531.35
Theoretical mz531.347
Error5.69
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.3768

Identifiers and class information

Inchi keyFQRJPQZSBBWOMS-UEDAADEJNA-N
SmilesO=C(C=1C(O)=C(C(O)=C(C1O)C2C=C(C)CCC2C(C)C)C3C=C(C)CCC3C(C)C)CCC=4C=CC=CC4
SuperclassPhenylpropanoids and polyketides
ClassLinear 1,3-diarylpropanoids

Pharmacokinetic properties

Number of descriptor values(#stars)4
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)9
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)530.746
Computed dipole moment(dipole)6.106
Total solvent accessible surface area (SASA)823.825
Hydrophobic component of SASA (FOSA)590.866
Hydrophilic component of SASA (FISA)63.693
Pie component of the SASA (PISA)169.266
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1675.73
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)2.25
Free energy of solvation of dipole (dip^2/V)0.0222517
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0027312
Globularity descriptor (glob)0.828194
Predicted polarizability in cubic angstroms (QPpolrz)56.746
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.411
Predicted octanol/gas partition coefficient (QPlogPoct)21.645
Predicted water/gas partition coefficient (QPlogPw)4.982
Predicted octanol/water partition coefficient (QPlogPo/w)8.71
Predicted aqueous solubility (QPlogS)-9.057
Conformation-independent predicted aqueous solubility (CIQPlogS)-10.119
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.119
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2465.46
Predicted brain/blood partition coefficient (QPlogBB)-0.598
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1312.03
Predicted skin permeability, log Kp (QPlogKp)-1.233
PM3 calculated ionization potential (IP(ev))8.938
PM3 calculated electron affinity (EA(eV))0.059
Number of likely metabolic reactions (#metab)11
Prediction of binding to human serum albumin (QPlogKhsa)2.432
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)72.443
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q96RJ0TAAR1Trace amine-associated receptor 1 (by homology)T99524SEA
Q05940SLC18A2Synaptic vesicular amine transporter (by homology)T48873SEA
O14842FFAR1Free fatty acid receptor 1T25608SEA
P07195LDHBL-lactate dehydrogenase B chainT88057SEA
P08183ABCB1P-glycoprotein 1T25258SEA
P07711CTSLCathepsin LT98691SwissTargetPrediction
Q7RTX1TAS1R1Taste receptorT41263SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T99524DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]Q96RJ0TAAR1
T99524DI0149Focal/segmental autonomic disorder[ICD-11: 8D8A]Q96RJ0TAAR1
T99524DI0290Narcolepsy[ICD-11: 7A20]Q96RJ0TAAR1
T48873DI0079Choreiform disorder[ICD-11: 8A01]Q05940SLC18A2
T48873DI0125Dissociative neurological symptom disorder[ICD-11: 6B60]Q05940SLC18A2
T48873DI0129Dystonic disorder[ICD-11: 8A02]Q05940SLC18A2
T48873DI0137Essential hypertension[ICD-11: BA00]Q05940SLC18A2
T48873DI0190Hypertension[ICD-11: BA00-BA04]Q05940SLC18A2
T25608DI0417Type 2 diabetes mellitus[ICD-11: 5A11]O14842FFAR1
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1
T98691DI0263Middle East Respiratory Syndrome[ICD-11: 1D64]P07711CTSL
T98691DI0376Severe acute respiratory syndrome[ICD-11: 1D65]P07711CTSL
T41263DI0078Cholera[ICD-11: 1A00]Q7RTX1TAS1R1

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