Schottenol 3-glucoside



Compound IDCDAMM01076
Common nameSchottenol 3-glucoside
IUPAC name2-[[17-(5-ethyl-6-methylheptan-2-yl)-10,13-dimethyl-2,3,4,5,6,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol
Molecular formulaC35H60O6

Experimental data

Retention time17.84
Adduct[M+Na]+
Actual mz599.422
Theoretical mz599.428
Error9.54
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.6822

Identifiers and class information

Inchi keyXWPUVGRUJWXYTP-UHFFFAOYNA-N
SmilesOCC1OC(OC2CCC3(C)C4C(=CCC3C2)C5CCC(C(C)CCC(CC)C(C)C)C5(C)CC4)C(O)C(O)C1O
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)4
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)13
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)576.855
Computed dipole moment(dipole)3.65
Total solvent accessible surface area (SASA)979.301
Hydrophobic component of SASA (FOSA)794.72
Hydrophilic component of SASA (FISA)167.981
Pie component of the SASA (PISA)16.6
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1887.95
Number of hydrogen bond donors (donorHB)4
Number of hydrogen bond acceptors (accptHB)10.2
Free energy of solvation of dipole (dip^2/V)0.0070558
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0208312
Globularity descriptor (glob)0.754357
Predicted polarizability in cubic angstroms (QPpolrz)61.213
Predicted hexadecane/gas partition coefficient (QPlogPC16)18.219
Predicted octanol/gas partition coefficient (QPlogPoct)31.476
Predicted water/gas partition coefficient (QPlogPw)16.369
Predicted octanol/water partition coefficient (QPlogPo/w)5.226
Predicted aqueous solubility (QPlogS)-7.794
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.719
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.586
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)252.893
Predicted brain/blood partition coefficient (QPlogBB)-2.188
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)111.942
Predicted skin permeability, log Kp (QPlogKp)-3.309
PM3 calculated ionization potential (IP(ev))9.43
PM3 calculated electron affinity (EA(eV))-1.066
Number of likely metabolic reactions (#metab)7
Prediction of binding to human serum albumin (QPlogKhsa)0.983
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)74.636
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)102.083
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P40763STAT3Signal transducer and activator of transcription 3T29130SwissTargetPrediction
P15692VEGFAVascular endothelial growth factor AT20761SEA
P05230FGF1Acidic fibroblast growth factorT18639SEA
P09038FGF2Basic fibroblast growth factorT31621SEA
P60568IL2Interleukin-2T61698SwissTargetPrediction and SEA
P17931LGALS3Galectin-3T72038SEA
P14679TYRTyrosinaseT97035SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T29130DI0351Psoriasis[ICD-11: EA90]P40763STAT3
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T18639DI0081Chronic arterial occlusive disease[ICD-11: BD4Z]P05230FGF1
T18639DI0102Coronary atherosclerosis[ICD-11: BA52]P05230FGF1
T31621DI0005Acne vulgaris[ICD-11: ED80]P09038FGF2
T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2
T72038DI0190Hypertension[ICD-11: BA00-BA04]P17931LGALS3
T72038DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]P17931LGALS3
T72038DI0252Melanoma[ICD-11: 2C30]P17931LGALS3
T72038DI0302Non-alcoholic fatty liver disease[ICD-11: DB92]P17931LGALS3
T72038DI0351Psoriasis[ICD-11: EA90]P17931LGALS3
T97035DI0007Acquired hypermelanosis[ICD-11: ED60]P14679TYR
T97035DI0008Acquired hypomelanotic disorder[ICD-11: ED63]P14679TYR

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