Ochrocarpin C



Compound IDCDAMM01067
Common nameOchrocarpin C
IUPAC name5-hydroxy-8-(2-hydroxypropan-2-yl)-6-(2-methylpropanoyl)-4-phenylfuro[2,3-h]chromen-2-one
Molecular formulaC24H22O6

Experimental data

Retention time0.42
Adduct[M+H]+
Actual mz407.145
Theoretical mz407.149
Error10.99
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.7453

Identifiers and class information

Inchi keyVUTHGCZKFOZRRG-UHFFFAOYSA-N
SmilesO=C1OC=2C=3C=C(OC3C(=C(O)C2C(=C1)C=4C=CC=CC4)C(=O)C(C)C)C(O)(C)C
SuperclassPhenylpropanoids and polyketides
ClassNeoflavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)406.434
Computed dipole moment(dipole)1.282
Total solvent accessible surface area (SASA)682.621
Hydrophobic component of SASA (FOSA)264.951
Hydrophilic component of SASA (FISA)152.15
Pie component of the SASA (PISA)265.521
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1247.96
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)5.5
Free energy of solvation of dipole (dip^2/V)0.0013163
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0080572
Globularity descriptor (glob)0.821208
Predicted polarizability in cubic angstroms (QPpolrz)42.473
Predicted hexadecane/gas partition coefficient (QPlogPC16)12.986
Predicted octanol/gas partition coefficient (QPlogPoct)18.588
Predicted water/gas partition coefficient (QPlogPw)9.761
Predicted octanol/water partition coefficient (QPlogPo/w)4.074
Predicted aqueous solubility (QPlogS)-5.7
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.418
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.691
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)357.326
Predicted brain/blood partition coefficient (QPlogBB)-1.302
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)162.654
Predicted skin permeability, log Kp (QPlogKp)-2.812
PM3 calculated ionization potential (IP(ev))8.74
PM3 calculated electron affinity (EA(eV))1.078
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)0.68
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)96.493
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)107.734
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P00533EGFREpidermal growth factor receptor erbB1T59328SwissTargetPrediction
Q96KS0EIT6HIF-prolyl hydroxylase 1T53904SwissTargetPrediction
P00338LDHAL-lactate dehydrogenase A chainT15053SEA
P07195LDHBL-lactate dehydrogenase B chainT88057SEA
Q07817BCL2L1Apoptosis regulator Bcl-XT56510SwissTargetPrediction
P04626ERBB2Receptor protein-tyrosine kinase erbB-2T14597SwissTargetPrediction
P16050ALOX15Arachidonate 15-lipoxygenaseT16042SwissTargetPrediction
P18054ALOX12Arachidonate 12-lipoxygenaseT35527SEA
P49356FNTBFarnesyl protein transferaseT13127SwissTargetPrediction
O75116ROCK2Rho-associated protein kinase 2T06093SwissTargetPrediction
P49841GSK3BGlycogen synthase kinase-3 betaT70977SwissTargetPrediction
Q9UNA0ADAMTS5ADAMTS5T98896SwissTargetPrediction
Q99523SORT1Neurotensin receptor 3T63233SEA
P06493CDK1Cyclin-dependent kinase 1/cyclin B1T49898SwissTargetPrediction
P25025CXCR2Interleukin-8 receptor BT56923SwissTargetPrediction
P00749PLAUUrokinase-type plasminogen activatorT17758SwissTargetPrediction
Q16678CYP1B1Cytochrome P450 1B1T92521SEA
P14625HSP90B1EndoplasminT81311SwissTargetPrediction
P16220CREB1Cyclic AMP-responsive element-binding proteinT92098SEA
Q15717ELAVL1ELAV-like protein 1T78349SEA
Q9GZT9EGLN1Egl nine homolog 1T32880SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T59328DI0030Angina pectoris[ICD-11: BA40]P00533EGFR
T59328DI0062Breast cancer[ICD-11: 2C60-2C6Y]P00533EGFR
T59328DI0095Colorectal cancer[ICD-11: 2B91]P00533EGFR
T59328DI0121Diabetic foot ulcer[ICD-11: BD54]P00533EGFR
T59328DI0220Ischemia[ICD-11: 8B10-8B11]P00533EGFR
T59328DI0238Lung cancer[ICD-11: 2C25]P00533EGFR
T59328DI0303Non-small-cell lung cancer[ICD-11: 2C25]P00533EGFR
T59328DI0361Renal cell carcinoma[ICD-11: 2C90]P00533EGFR
T59328DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P00533EGFR
T59328DI0420Unspecific body region injury[ICD-11: ND56]P00533EGFR
T53904DI0010Acute disease anaemia[ICD-11: 3A90]Q96KS0EIT6
T56510DI0286Myeloproliferative neoplasm[ICD-11: 2A20]Q07817BCL2L1
T14597DI0062Breast cancer[ICD-11: 2C60-2C6Y]P04626ERBB2
T14597DI0238Lung cancer[ICD-11: 2C25]P04626ERBB2
T14597DI0346Prostate cancer[ICD-11: 2C82]P04626ERBB2
T13127DI0342Premature ageing appearance[ICD-11: LD2B]P49356FNTB
T06093DI0168Graft-versus-host disease[ICD-11: 4B24]O75116ROCK2
T70977DI0288Myotonic disorder[ICD-11: 8C71]P49841GSK3B
T98896DI0320Osteoarthritis[ICD-11: FA00-FA05]Q9UNA0ADAMTS5
T63233DI0153Frontotemporal dementia[ICD-11: 6D83]Q99523SORT1
T49898DI0062Breast cancer[ICD-11: 2C60-2C6Y]P06493CDK1
T49898DI0238Lung cancer[ICD-11: 2C25]P06493CDK1
T49898DI0245Malignant haematopoietic neoplasm[ICD-11: 2B33]P06493CDK1
T49898DI0250Mature B-cell lymphoma[ICD-11: 2A85]P06493CDK1
T49898DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P06493CDK1
T56923DI0155Fungal infection[ICD-11: 1F29-1F2F]P25025CXCR2
T56923DI0324Pain[ICD-11: MG30-MG3Z]P25025CXCR2
T17758DI0211Inherited coagulation factor deficiency[ICD-11: 3B14]P00749PLAU
T17758DI0287Myocardial infarction[ICD-11: BA41-BA43]P00749PLAU
T81311DI0238Lung cancer[ICD-11: 2C25]P14625HSP90B1

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