7-Hydroxy-2-methyl-4-oxo-4H-1-benzopyran-5-carboxylic acid



Compound IDCDAMM01051
Common name7-Hydroxy-2-methyl-4-oxo-4H-1-benzopyran-5-carboxylic acid
IUPAC name7-hydroxy-2-methyl-4-oxochromene-5-carboxylic acid
Molecular formulaC11H8O5

Experimental data

Retention time23.75
Adduct[M+H]+
Actual mz221.045
Theoretical mz221.044
Error2.37
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.983

Identifiers and class information

Inchi keyZCNVIPLKMDPDHM-UHFFFAOYSA-N
SmilesO=C(O)C=1C=C(O)C=C2OC(=CC(=O)C21)C
SuperclassOrganoheterocyclic compounds
ClassBenzopyrans

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)2
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)220.181
Computed dipole moment(dipole)8.646
Total solvent accessible surface area (SASA)417.459
Hydrophobic component of SASA (FOSA)95.268
Hydrophilic component of SASA (FISA)192.448
Pie component of the SASA (PISA)129.743
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)675.239
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)5.25
Free energy of solvation of dipole (dip^2/V)0.110716
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0177853
Globularity descriptor (glob)0.89164
Predicted polarizability in cubic angstroms (QPpolrz)20.824
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.217
Predicted octanol/gas partition coefficient (QPlogPoct)14.022
Predicted water/gas partition coefficient (QPlogPw)10.575
Predicted octanol/water partition coefficient (QPlogPo/w)0.668
Predicted aqueous solubility (QPlogS)-2.028
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.328
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.097
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)37.542
Predicted brain/blood partition coefficient (QPlogBB)-1.171
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)18.114
Predicted skin permeability, log Kp (QPlogKp)-4.417
PM3 calculated ionization potential (IP(ev))9.947
PM3 calculated electron affinity (EA(eV))1.34
Number of likely metabolic reactions (#metab)2
Prediction of binding to human serum albumin (QPlogKhsa)-0.67
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)59.04
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)103.178
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P02766TTRTransthyretinT86462SEA
P43166CA7Carbonic anhydrase VIIT37541SEA
P22748CA4Carbonic anhydrase IVT53378SEA
P15121AKR1B1Aldose reductaseT26623SEA
P05164MPOMyeloperoxidaseT23471SEA
Q6B0I6KDM4DLysine-specific demethylase 4DT17036SEA
Q9HC97GPR35G-protein coupled receptor 35T56143SEA
P33527ABCC1Multidrug resistance-associated protein 1T11288SEA
P08183ABCB1P-glycoprotein 1T25258SEA
P27695APEX1DNA-(apurinic or apyrimidinic site) lyaseT13348SEA
P15692VEGFAVascular endothelial growth factor AT20761SEA
P49763PGFPlacenta growth factorT70792SEA
Q9UNQ0ABCG2ATP-binding cassette sub-family G member 2T56556SEA
Q9NPH5NOX4NADPH oxidase 4T29741SEA
P47989XDHXanthine dehydrogenaseT40954SEA
Q16678CYP1B1Cytochrome P450 1B1T92521SEA
Q04760GLO1Glyoxalase IT88285SEA
P51679CCR4C-C chemokine receptor type 4T06955SEA
Q9HC98NEK6Serine/threonine-protein kinase NEK6T78992SEA
P16152CBR1Carbonyl reductase [NADPH] 1T70518SEA
Q13332PTPRSReceptor-type tyrosine-protein phosphatase ST10147SEA
O75581LRP6Low-density lipoprotein receptor-related protein 6T49755SEA
O15427SLC16A3Monocarboxylate transporter 4T31788SEA
Q99417MYCBPMYCBP messenger RNAT37298SEA
P16220CREB1Cyclic AMP-responsive element-binding proteinT92098SEA
Q15717ELAVL1ELAV-like protein 1T78349SEA
Q9UK17KCND3Voltage-gated potassium channel Kv4.3T74500SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T86462DI0026Amyloidosis[ICD-11: 5D00]P02766TTR
T53378DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P22748CA4
T53378DI0166Glaucoma[ICD-11: 9C61]P22748CA4
T53378DI0372Seborrhoeic dermatitis[ICD-11: EA81]P22748CA4
T26623DI0298Neuropathy[ICD-11: 8C0Z]P15121AKR1B1
T26623DI0366Rheumatoid arthritis[ICD-11: FA20]P15121AKR1B1
T23471DI0229Left ventricular failure[ICD-11: BD11]P05164MPO
T23471DI0339Postoperative inflammation[ICD-11: 1A00-CA43]P05164MPO
T11288DI0167Gout[ICD-11: FA25]P33527ABCC1
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1
T13348DI0365Retinopathy[ICD-11: 9B71]P27695APEX1
T13348DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P27695APEX1
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T70792DI0095Colorectal cancer[ICD-11: 2B91]P49763PGF
T56556DI0218Irritable bowel syndrome[ICD-11: DD91]Q9UNQ0ABCG2
T56556DI0366Rheumatoid arthritis[ICD-11: FA20]Q9UNQ0ABCG2
T29741DI0146Fibrosis[ICD-11: GA14-GC01]Q9NPH5NOX4
T40954DI0206Inborn purine/pyrimidine/nucleotide metabolism error[ICD-11: 5C55]P47989XDH
T40954DI0266Mineral deficiency[ICD-11: 5B5K]P47989XDH
T88285DI0210Influenza[ICD-11: 1E30-1E32]Q04760GLO1
T06955DI0283Mycosis fungoides[ICD-11: 2B01]P51679CCR4
T06955DI0379Sezary syndrome[ICD-11: 2B02]P51679CCR4
T70518DI0037Asthma[ICD-11: CA23]P16152CBR1
T10147DI0057Bone paget disease[ICD-11: FB85]Q13332PTPRS
T49755DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]O75581LRP6
T37298DI0235Liver cancer[ICD-11: 2C12]Q99417MYCBP
T74500DI0004Acidosis[ICD-11: 5C73]Q9UK17KCND3

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