Neoxanthin



Compound IDCDAMM01044
Common nameNeoxanthin
IUPAC name0
Molecular formulaC40H56O4

Experimental data

Retention time17.41
Adduct[M+K]+
Actual mz639.39
Theoretical mz639.381
Error13.52
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.5414

Identifiers and class information

Inchi keyPGYAYSRVSAJXTE-CLONMANBSA-N
SmilesOC1CC(O)(C(=C=CC(=CC=CC(=CC=CC=C(C=CC=C(C=CC23OC3(C)CC(O)CC2(C)C)C)C)C)C)C(C)(C)C1)C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)9
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)21
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)600.88
Computed dipole moment(dipole)3.532
Total solvent accessible surface area (SASA)1132.33
Hydrophobic component of SASA (FOSA)886.193
Hydrophilic component of SASA (FISA)107.192
Pie component of the SASA (PISA)138.947
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)2136.11
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)6.15
Free energy of solvation of dipole (dip^2/V)0.0058396
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0094072
Globularity descriptor (glob)0.708393
Predicted polarizability in cubic angstroms (QPpolrz)67.176
Predicted hexadecane/gas partition coefficient (QPlogPC16)21.39
Predicted octanol/gas partition coefficient (QPlogPoct)29.312
Predicted water/gas partition coefficient (QPlogPw)9.938
Predicted octanol/water partition coefficient (QPlogPo/w)9.174
Predicted aqueous solubility (QPlogS)-10.771
Conformation-independent predicted aqueous solubility (CIQPlogS)-8.685
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.913
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)953.665
Predicted brain/blood partition coefficient (QPlogBB)-2.126
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)469.98
Predicted skin permeability, log Kp (QPlogKp)-0.989
PM3 calculated ionization potential (IP(ev))7.917
PM3 calculated electron affinity (EA(eV))0.927
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)2.136
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)69.254
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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