3-Epipapyriferic acid



Compound IDCDAMM01033
Common name3-Epipapyriferic acid
IUPAC name3-[[12-acetyloxy-17-[5-(2-hydroxypropan-2-yl)-2-methyloxolan-2-yl]-4,4,8,10,14-pentamethyl-2,3,5,6,7,9,11,12,13,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-3-oxopropanoic acid
Molecular formulaC35H56O8

Experimental data

Retention time38.76
Adduct[M+H]+
Actual mz605.408
Theoretical mz605.405
Error4
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.47

Identifiers and class information

Inchi keyRLVAVWQAAQFUOP-UHFFFAOYNA-N
SmilesO=C(OC1CC2C3(C)CCC(OC(=O)CC(=O)O)C(C)(C)C3CCC2(C)C4(C)CCC(C14)C5(OC(CC5)C(O)(C)C)C)C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)3
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)604.823
Computed dipole moment(dipole)3.062
Total solvent accessible surface area (SASA)853.694
Hydrophobic component of SASA (FOSA)685.247
Hydrophilic component of SASA (FISA)168.447
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1782.06
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)6.5
Free energy of solvation of dipole (dip^2/V)0.0052621
Index of cohesive interaction in solids (ACxDN^.5/SA)0.007614
Globularity descriptor (glob)0.832678
Predicted polarizability in cubic angstroms (QPpolrz)61.311
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.805
Predicted octanol/gas partition coefficient (QPlogPoct)25.732
Predicted water/gas partition coefficient (QPlogPw)9.463
Predicted octanol/water partition coefficient (QPlogPo/w)7.143
Predicted aqueous solubility (QPlogS)-8.374
Conformation-independent predicted aqueous solubility (CIQPlogS)-8.918
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.432
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)63.404
Predicted brain/blood partition coefficient (QPlogBB)-1.418
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)31.917
Predicted skin permeability, log Kp (QPlogKp)-4.048
PM3 calculated ionization potential (IP(ev))10.236
PM3 calculated electron affinity (EA(eV))-0.324
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)1.782
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)75.109
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)135.956
Number of nitrogen and oxygen atoms (#NandO)8
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P17706PTPN2T-cell protein-tyrosine phosphataseT49156SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T49156DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P17706PTPN2

Copyright © 2025