Neoherculin



Compound IDCDAMM01013
Common nameNeoherculin
IUPAC nameN-(2-methylpropyl)dodeca-2,6,8,10-tetraenamide
Molecular formulaC16H25NO

Experimental data

Retention time15.54
Adduct[M+H]+
Actual mz248.204
Theoretical mz248.201
Error9.36
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.1849

Identifiers and class information

Inchi keySBXYHCVXUCYYJT-JRNWQWJGSA-N
SmilesOC(=NCC(C)C)C=CCCC=CC=CC=CC
SuperclassOrganic acids and derivatives
ClassCarboximidic acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)9
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)247.38
Computed dipole moment(dipole)4.54
Total solvent accessible surface area (SASA)650.16
Hydrophobic component of SASA (FOSA)515.944
Hydrophilic component of SASA (FISA)49.2
Pie component of the SASA (PISA)85.016
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1075.59
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)2.5
Free energy of solvation of dipole (dip^2/V)0.0191662
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0038452
Globularity descriptor (glob)0.780863
Predicted polarizability in cubic angstroms (QPpolrz)31.924
Predicted hexadecane/gas partition coefficient (QPlogPC16)9.353
Predicted octanol/gas partition coefficient (QPlogPoct)12.405
Predicted water/gas partition coefficient (QPlogPw)4.139
Predicted octanol/water partition coefficient (QPlogPo/w)4.724
Predicted aqueous solubility (QPlogS)-5.746
Conformation-independent predicted aqueous solubility (CIQPlogS)-3.209
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.483
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)3383.25
Predicted brain/blood partition coefficient (QPlogBB)-0.517
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1847.13
Predicted skin permeability, log Kp (QPlogKp)-1.263
PM3 calculated ionization potential (IP(ev))8.584
PM3 calculated electron affinity (EA(eV))0.284
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)0.671
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)37.317
Number of nitrogen and oxygen atoms (#NandO)2
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

Copyright © 2025