Caffeoylcycloartenol



Compound IDCDAMM00962
Common nameCaffeoylcycloartenol
IUPAC name[7,7,12,16-tetramethyl-15-(6-methylhept-5-en-2-yl)-6-pentacyclo[9.7.0.01,3.03,8.012,16]octadecanyl] 3-(3,4-dihydroxyphenyl)prop-2-enoate
Molecular formulaC39H56O4

Experimental data

Retention time14.78
Adduct[M+H]+
Actual mz589.427
Theoretical mz589.425
Error3.26
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.0661

Identifiers and class information

Inchi keyQKNCKSQAXGWPIK-FOWTUZBSNA-N
SmilesO=C(OC1CCC23CC43CCC5(C)C(CCC5(C)C4CCC2C1(C)C)C(C)CCC=C(C)C)C=CC6=CC=C(O)C(O)=C6
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)5
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)10
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)588.869
Computed dipole moment(dipole)3.039
Total solvent accessible surface area (SASA)1000.56
Hydrophobic component of SASA (FOSA)704.634
Hydrophilic component of SASA (FISA)137.524
Pie component of the SASA (PISA)158.398
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1935.39
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)3.5
Free energy of solvation of dipole (dip^2/V)0.0047717
Index of cohesive interaction in solids (ACxDN^.5/SA)0.004947
Globularity descriptor (glob)0.750647
Predicted polarizability in cubic angstroms (QPpolrz)66.392
Predicted hexadecane/gas partition coefficient (QPlogPC16)19.015
Predicted octanol/gas partition coefficient (QPlogPoct)26.909
Predicted water/gas partition coefficient (QPlogPw)8.311
Predicted octanol/water partition coefficient (QPlogPo/w)9.07
Predicted aqueous solubility (QPlogS)-11.408
Conformation-independent predicted aqueous solubility (CIQPlogS)-9.842
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-6.322
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)491.77
Predicted brain/blood partition coefficient (QPlogBB)-1.666
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)229.711
Predicted skin permeability, log Kp (QPlogKp)-2.536
PM3 calculated ionization potential (IP(ev))8.923
PM3 calculated electron affinity (EA(eV))0.808
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)2.72
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)77.019
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)2
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P02766TTRTransthyretinT86462SEA
P23280CA6Carbonic anhydrase VIT06569SEA
P19838NFKB1Nuclear factor NF-kappa-B p105 subunitT83145SEA
P49810PSEN2Gamma-secretaseT99204SEA
P10636MAPTMicrotubule-associated protein tauT45593SEA
P49768PSEN1Presenilin 1T93105SEA
Q96BI3APH1AGamma-secretaseT99840SEA
Q96BI3APH1AGamma-secretaseT99840SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T86462DI0026Amyloidosis[ICD-11: 5D00]P02766TTR
T06569DI0046Bacterial infection[ICD-11: 1A00-1C4Z]P23280CA6
T06569DI0372Seborrhoeic dermatitis[ICD-11: EA81]P23280CA6
T83145DI0218Irritable bowel syndrome[ICD-11: DD91]P19838NFKB1
T83145DI0366Rheumatoid arthritis[ICD-11: FA20]P19838NFKB1
T99204DI0320Osteoarthritis[ICD-11: FA00-FA05]P49810PSEN2
T99204DI0380Shoulder lesion[ICD-11: FB53]P49810PSEN2
T99204DI0390Soft tissue disorder[ICD-11: FB56]P49810PSEN2
T45593DI0012Acute myeloid leukaemia[ICD-11: 2A60]P10636MAPT
T45593DI0025Alzheimer disease[ICD-11: 8A20]P10636MAPT
T45593DI0265Mild neurocognitive disorder[ICD-11: 6D71]P10636MAPT
T93105DI0320Osteoarthritis[ICD-11: FA00-FA05]P49768PSEN1
T93105DI0380Shoulder lesion[ICD-11: FB53]P49768PSEN1
T93105DI0390Soft tissue disorder[ICD-11: FB56]P49768PSEN1
T99840DI0119Desmoid tumour[ICD-11: 2F7C]Q96BI3APH1A
T99840DI0119Desmoid tumour[ICD-11: 2F7C]Q96BI3APH1A

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