Dictagymnin



Compound IDCDAMM00942
Common nameDictagymnin
IUPAC name1-(3-methylbut-2-enoxy)-4-prop-2-enylbenzene
Molecular formulaC14H18O

Experimental data

Retention time15.67
Adduct[M+H]+
Actual mz203.145
Theoretical mz203.143
Error8.98
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.664

Identifiers and class information

Inchi keyUCSGFTQHJDOIND-UHFFFAOYSA-N
SmilesO(C1=CC=C(C=C1)CC=C)CC=C(C)C
SuperclassBenzenoids
ClassPhenol ethers

Pharmacokinetic properties

Number of descriptor values(#stars)3
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)5
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)2
Molecular weight (mol_MW)202.296
Computed dipole moment(dipole)1.63
Total solvent accessible surface area (SASA)516.856
Hydrophobic component of SASA (FOSA)316.019
Hydrophilic component of SASA (FISA)0
Pie component of the SASA (PISA)200.837
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)846.79
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)0.75
Free energy of solvation of dipole (dip^2/V)0.0031358
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.83749
Predicted polarizability in cubic angstroms (QPpolrz)26.442
Predicted hexadecane/gas partition coefficient (QPlogPC16)7.346
Predicted octanol/gas partition coefficient (QPlogPoct)8.113
Predicted water/gas partition coefficient (QPlogPw)1.965
Predicted octanol/water partition coefficient (QPlogPo/w)4.569
Predicted aqueous solubility (QPlogS)-5.986
Conformation-independent predicted aqueous solubility (CIQPlogS)-5.986
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.119
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)9906.04
Predicted brain/blood partition coefficient (QPlogBB)0.482
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)5899.29
Predicted skin permeability, log Kp (QPlogKp)-0.332
PM3 calculated ionization potential (IP(ev))8.984
PM3 calculated electron affinity (EA(eV))-0.329
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)0.663
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)7.634
Number of nitrogen and oxygen atoms (#NandO)1
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q03181PPARDPeroxisome proliferator-activated receptor deltaT36557SEA
Q86VL8SLC47A2Multidrug and toxin extrusion protein 2T78127SEA
O15269SPTLC1Serine palmitoyltransferaseT30817SEA
O75751EMTHOrganic cation transporter 3T55948SEA
P04271S100BS100 calcium-binding protein BT87206SEA
P21673SAT1Solute carrier family 38 member 1T30844SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T36557DI0302Non-alcoholic fatty liver disease[ICD-11: DB92]Q03181PPARD
T36557DI0308Obesity[ICD-11: 5B80-5B81]Q03181PPARD
T30817DI0179Hepatitis virus infection[ICD-11: 1E50-1E51]O15269SPTLC1
T87206DI0219Ischaemic/haemorrhagic stroke[ICD-11: 8B20]P04271S100B

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