(3S,7E,9S)-9-Hydroxy-4,7-megastigmadien-3-one 9-glucoside



Compound IDCDAMM00899
Common name(3S,7E,9S)-9-Hydroxy-4,7-megastigmadien-3-one 9-glucoside
IUPAC name3,5,5-trimethyl-4-[3-[3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxybut-1-enyl]cyclohex-2-en-1-one
Molecular formulaC19H30O7

Experimental data

Retention time11.81
Adduct[M+H]+
Actual mz371.209
Theoretical mz371.206
Error6.26
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.3424

Identifiers and class information

Inchi keySZOPSAFLRCYJCX-AATRIKPKNA-N
SmilesO=C1C=C(C)C(C=CC(OC2OC(CO)C(O)C(O)C2O)C)C(C)(C)C1
SuperclassLipids and lipid-like molecules
ClassFatty Acyls

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)9
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)370.442
Computed dipole moment(dipole)4.711
Total solvent accessible surface area (SASA)602.628
Hydrophobic component of SASA (FOSA)378.066
Hydrophilic component of SASA (FISA)212.35
Pie component of the SASA (PISA)12.212
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1153.63
Number of hydrogen bond donors (donorHB)4
Number of hydrogen bond acceptors (accptHB)12.2
Free energy of solvation of dipole (dip^2/V)0.0192377
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0404893
Globularity descriptor (glob)0.882726
Predicted polarizability in cubic angstroms (QPpolrz)34.352
Predicted hexadecane/gas partition coefficient (QPlogPC16)11.508
Predicted octanol/gas partition coefficient (QPlogPoct)23.951
Predicted water/gas partition coefficient (QPlogPw)18.587
Predicted octanol/water partition coefficient (QPlogPo/w)0.021
Predicted aqueous solubility (QPlogS)-2.225
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.274
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.488
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)95.982
Predicted brain/blood partition coefficient (QPlogBB)-1.796
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)39.284
Predicted skin permeability, log Kp (QPlogKp)-4.526
PM3 calculated ionization potential (IP(ev))10.235
PM3 calculated electron affinity (EA(eV))0.314
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)-0.661
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)62.546
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)129.078
Number of nitrogen and oxygen atoms (#NandO)7
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P15692VEGFAVascular endothelial growth factor AT20761SEA
P05230FGF1Acidic fibroblast growth factorT18639SEA
P09038FGF2Basic fibroblast growth factorT31621SEA
P60568IL2Interleukin-2T61698SEA
P17931LGALS3Galectin-3T72038SEA
P14679TYRTyrosinaseT97035SEA
Q9NZ08ERAP1Endoplasmic reticulum aminopeptidase 1T72849SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T20761DI0095Colorectal cancer[ICD-11: 2B91]P15692VEGFA
T20761DI0365Retinopathy[ICD-11: 9B71]P15692VEGFA
T20761DI0430Vascular system developmental anomaly[ICD-11: LA90]P15692VEGFA
T18639DI0081Chronic arterial occlusive disease[ICD-11: BD4Z]P05230FGF1
T18639DI0102Coronary atherosclerosis[ICD-11: BA52]P05230FGF1
T31621DI0005Acne vulgaris[ICD-11: ED80]P09038FGF2
T61698DI0275Multiple sclerosis[ICD-11: 8A40]P60568IL2
T61698DI0361Renal cell carcinoma[ICD-11: 2C90]P60568IL2
T72038DI0190Hypertension[ICD-11: BA00-BA04]P17931LGALS3
T72038DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]P17931LGALS3
T72038DI0252Melanoma[ICD-11: 2C30]P17931LGALS3
T72038DI0302Non-alcoholic fatty liver disease[ICD-11: DB92]P17931LGALS3
T72038DI0351Psoriasis[ICD-11: EA90]P17931LGALS3
T97035DI0007Acquired hypermelanosis[ICD-11: ED60]P14679TYR
T97035DI0008Acquired hypomelanotic disorder[ICD-11: ED63]P14679TYR

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