Myristicin



Compound IDCDAMM00793
Common nameMyristicin
IUPAC name4-methoxy-6-prop-2-enyl-1,3-benzodioxole
Molecular formulaC11H12O3

Experimental data

Retention time19.23
Adduct[M+H]+
Actual mz193.085
Theoretical mz193.086
Error4.02
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.2734

Identifiers and class information

Inchi keyBNWJOHGLIBDBOB-UHFFFAOYSA-N
SmilesO(C=1C=C(C=C2OCOC12)CC=C)C
SuperclassOrganoheterocyclic compounds
ClassBenzodioxoles

Pharmacokinetic properties

Number of descriptor values(#stars)3
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)0
Molecular weight (mol_MW)192.214
Computed dipole moment(dipole)2.55
Total solvent accessible surface area (SASA)389.748
Hydrophobic component of SASA (FOSA)277.208
Hydrophilic component of SASA (FISA)0
Pie component of the SASA (PISA)112.54
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)652.931
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)2.25
Free energy of solvation of dipole (dip^2/V)0.0099605
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.933882
Predicted polarizability in cubic angstroms (QPpolrz)19.125
Predicted hexadecane/gas partition coefficient (QPlogPC16)5.429
Predicted octanol/gas partition coefficient (QPlogPoct)6.591
Predicted water/gas partition coefficient (QPlogPw)2.977
Predicted octanol/water partition coefficient (QPlogPo/w)2.123
Predicted aqueous solubility (QPlogS)-2.68
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.68
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.139
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)9906.04
Predicted brain/blood partition coefficient (QPlogBB)-0.282
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)5899.29
Predicted skin permeability, log Kp (QPlogKp)-0.835
PM3 calculated ionization potential (IP(ev))8.865
PM3 calculated electron affinity (EA(eV))-0.157
Number of likely metabolic reactions (#metab)2
Prediction of binding to human serum albumin (QPlogKhsa)-0.216
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)27.03
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P28335HTR2CSerotonin 2c (5-HT2c) receptorT83813SEA
P41595HTR2BSerotonin 2b (5-HT2b) receptorT31204SEA
Q7Z2W7TRPM8Transient receptor potential cation channel subfamily M member 8T41955SEA
P25101EDNRAEndothelin receptor ET-AT23499SEA
P24530EDNRBEndothelin receptor ET-BT92828SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T83813DI0117Depression[ICD-11: 6A70-6A7Z]P28335HTR2C
T83813DI0264Migraine[ICD-11: 8A80]P28335HTR2C
T83813DI0308Obesity[ICD-11: 5B80-5B81]P28335HTR2C
T83813DI0324Pain[ICD-11: MG30-MG3Z]P28335HTR2C
T83813DI0337Pituitary gland disorder[ICD-11: 5A60-5A61]P28335HTR2C
T31204DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]P41595HTR2B
T31204DI0117Depression[ICD-11: 6A70-6A7Z]P41595HTR2B
T31204DI0337Pituitary gland disorder[ICD-11: 5A60-5A61]P41595HTR2B
T31204DI0354Psychotic disorder[ICD-11: 6A20-6A25]P41595HTR2B
T41955DI0422Upper respiratory tract disorder[ICD-11: CA0Z]Q7Z2W7TRPM8
T23499DI0070Cardiovascular disease[ICD-11: BA00-BE2Z]P25101EDNRA
T23499DI0356Pulmonary hypertension[ICD-11: BB01]P25101EDNRA
T23499DI0425Urinary system clinical symptom[ICD-11: MF8Y]P25101EDNRA
T92828DI0070Cardiovascular disease[ICD-11: BA00-BE2Z]P24530EDNRB
T92828DI0356Pulmonary hypertension[ICD-11: BB01]P24530EDNRB

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