Lucidiuline



Compound IDCDAMM00672
Common nameLucidiuline
IUPAC name3,6-dimethyl-3-azatricyclo[6.2.2.04,9]dodecan-11-one
Molecular formulaC13H21NO

Experimental data

Retention time8.98
Adduct[M+K]+
Actual mz246.129
Theoretical mz246.125
Error14.39
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.4394

Identifiers and class information

Inchi keyPISGDLOMGNKHKP-BMWASITENA-N
SmilesO=C1CC2CC(C)CC3N(C)CC1CC32
SuperclassOrganoheterocyclic compounds
ClassQuinolidines

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)1
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)0
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)2
Molecular weight (mol_MW)207.315
Computed dipole moment(dipole)3.55
Total solvent accessible surface area (SASA)440.722
Hydrophobic component of SASA (FOSA)392.092
Hydrophilic component of SASA (FISA)48.63
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)763.783
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)4
Free energy of solvation of dipole (dip^2/V)0.016496
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.916881
Predicted polarizability in cubic angstroms (QPpolrz)24.413
Predicted hexadecane/gas partition coefficient (QPlogPC16)5.932
Predicted octanol/gas partition coefficient (QPlogPoct)9.622
Predicted water/gas partition coefficient (QPlogPw)5.05
Predicted octanol/water partition coefficient (QPlogPo/w)1.466
Predicted aqueous solubility (QPlogS)-1.255
Conformation-independent predicted aqueous solubility (CIQPlogS)-0.643
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.603
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)854.357
Predicted brain/blood partition coefficient (QPlogBB)0.576
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)461.679
Predicted skin permeability, log Kp (QPlogKp)-4.478
PM3 calculated ionization potential (IP(ev))9.204
PM3 calculated electron affinity (EA(eV))-0.655
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)-0.235
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)88.003
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)33.79
Number of nitrogen and oxygen atoms (#NandO)2
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P43681CHRNA4Neuronal acetylcholine receptor; alpha4/beta2T70967SwissTargetPrediction
P31213SRD5A2Steroid 5-alpha-reductase 2T71390SwissTargetPrediction
P32297CHRNA3Neuronal acetylcholine receptor; alpha3/beta4T74166SwissTargetPrediction
Q01959SLC6A3Dopamine transporterT55959SwissTargetPrediction

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T70967DI0029Aneurysm/dissection[ICD-11: BD50]P43681CHRNA4
T70967DI0191Hypertensive crisis[ICD-11: BA03]P43681CHRNA4
T70967DI0196Hypotension[ICD-11: BA20-BA21]P43681CHRNA4
T71390DI0348Prostate hyperplasia[ICD-11: GA90]P31213SRD5A2
T74166DI0105Cough[ICD-11: MD12]P32297CHRNA3
T55959DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]Q01959SLC6A3
T55959DI0051Bipolar disorder[ICD-11: 6A60]Q01959SLC6A3
T55959DI0101Corneal disease[ICD-11: 9A76-9A78]Q01959SLC6A3
T55959DI0290Narcolepsy[ICD-11: 7A20]Q01959SLC6A3
T55959DI0308Obesity[ICD-11: 5B80-5B81]Q01959SLC6A3
T55959DI0331Parkinsonism[ICD-11: 8A00]Q01959SLC6A3

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