Physalin G



Compound IDCDAMM00640
Common namePhysalin G
IUPAC name5,15-dihydroxy-2,9,26-trimethyl-3,19,23,28-tetraoxaoctacyclo[16.9.1.118,27.01,5.02,24.08,17.09,14.021,26]nonacosa-11,13-diene-4,10,22,29-tetrone
Molecular formulaC28H30O10

Experimental data

Retention time13.32
Adduct[M+Na]+
Actual mz549.175
Theoretical mz549.173
Error3.06
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.3847

Identifiers and class information

Inchi keyCGVBSJOSWAZUIF-UHFFFAOYNA-N
SmilesO=C1OC2CC3(C)C1COC45OC6(C3C4=O)C(O)(C(=O)OC26C)CCC7C5CC(O)C8=CC=CC(=O)C87C
SuperclassLipids and lipid-like molecules
ClassSteroids and steroid derivatives

Plant source

  • Piper longum L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)0
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)2
    Number of reactive functional groups (#rtvFG)2
    Predicted central nervous system activity (CNS)-2
    Molecular weight (mol_MW)526.539
    Computed dipole moment(dipole)4.53
    Total solvent accessible surface area (SASA)644.135
    Hydrophobic component of SASA (FOSA)316.387
    Hydrophilic component of SASA (FISA)219.072
    Pie component of the SASA (PISA)108.677
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)1316.6
    Number of hydrogen bond donors (donorHB)2
    Number of hydrogen bond acceptors (accptHB)13.95
    Free energy of solvation of dipole (dip^2/V)0.0155872
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0306276
    Globularity descriptor (glob)0.901898
    Predicted polarizability in cubic angstroms (QPpolrz)46.29
    Predicted hexadecane/gas partition coefficient (QPlogPC16)13.221
    Predicted octanol/gas partition coefficient (QPlogPoct)26.687
    Predicted water/gas partition coefficient (QPlogPw)19.727
    Predicted octanol/water partition coefficient (QPlogPo/w)0.461
    Predicted aqueous solubility (QPlogS)-3.052
    Conformation-independent predicted aqueous solubility (CIQPlogS)-4.689
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.638
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)82.879
    Predicted brain/blood partition coefficient (QPlogBB)-1.353
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)33.521
    Predicted skin permeability, log Kp (QPlogKp)-4.982
    PM3 calculated ionization potential (IP(ev))9.788
    PM3 calculated electron affinity (EA(eV))0.938
    Number of likely metabolic reactions (#metab)4
    Prediction of binding to human serum albumin (QPlogKhsa)-0.417
    Predicted qualitative human oral absorption (HumanOralAbsorption)2
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)51.022
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)165.225
    Number of nitrogen and oxygen atoms (#NandO)10
    Number of violations of Lipinski’s rule of five (RuleOfFive)1
    Number of violations of Jorgensen’s rule of three (RuleOfThree)0

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P08151GLI1Zinc finger protein GLI1T40890SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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