[1S-(1alpha,2alpha,3beta,4abeta,8aalpha)]-Decahydro-1-(hydroxymethyl)-2,5,5,8a-tetramethyl-2,3-naphthalenediol



Compound IDCDAMM00577
Common name[1S-(1alpha,2alpha,3beta,4abeta,8aalpha)]-Decahydro-1-(hydroxymethyl)-2,5,5,8a-tetramethyl-2,3-naphthalenediol
IUPAC name4-(hydroxymethyl)-3,4a,8,8-tetramethyl-2,4,5,6,7,8a-hexahydro-1H-naphthalene-2,3-diol
Molecular formulaC15H28O3

Experimental data

Retention time14.01
Adduct[M+H]+
Actual mz257.213
Theoretical mz257.211
Error8.26
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.931

Identifiers and class information

Inchi keyBLJQFAPBVZSBOZ-UNUQCGESNA-N
SmilesOCC1C(O)(C)C(O)CC2C(C)(C)CCCC12C
SuperclassOrganic oxygen compounds
ClassOrganooxygen compounds

Plant source

  • Piper longum L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)2
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)4
    Number of reactive functional groups (#rtvFG)0
    Predicted central nervous system activity (CNS)-1
    Molecular weight (mol_MW)256.384
    Computed dipole moment(dipole)2.114
    Total solvent accessible surface area (SASA)466.274
    Hydrophobic component of SASA (FOSA)358.842
    Hydrophilic component of SASA (FISA)107.432
    Pie component of the SASA (PISA)0
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)857.783
    Number of hydrogen bond donors (donorHB)3
    Number of hydrogen bond acceptors (accptHB)4.15
    Free energy of solvation of dipole (dip^2/V)0.0052092
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0154159
    Globularity descriptor (glob)0.936359
    Predicted polarizability in cubic angstroms (QPpolrz)25.606
    Predicted hexadecane/gas partition coefficient (QPlogPC16)8.068
    Predicted octanol/gas partition coefficient (QPlogPoct)14.562
    Predicted water/gas partition coefficient (QPlogPw)9.171
    Predicted octanol/water partition coefficient (QPlogPo/w)1.911
    Predicted aqueous solubility (QPlogS)-2.565
    Conformation-independent predicted aqueous solubility (CIQPlogS)-2.614
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.562
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)948.688
    Predicted brain/blood partition coefficient (QPlogBB)-0.494
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)467.329
    Predicted skin permeability, log Kp (QPlogKp)-3.115
    PM3 calculated ionization potential (IP(ev))10.54
    PM3 calculated electron affinity (EA(eV))-2.428
    Number of likely metabolic reactions (#metab)3
    Prediction of binding to human serum albumin (QPlogKhsa)-0.058
    Predicted qualitative human oral absorption (HumanOralAbsorption)3
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)91.419
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)60.591
    Number of nitrogen and oxygen atoms (#NandO)3
    Number of violations of Lipinski’s rule of five (RuleOfFive)0
    Number of violations of Jorgensen’s rule of three (RuleOfThree)0

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P11511CYP19A1Cytochrome P450 19A1T13260SwissTargetPrediction
    P16662UGT2B7UDP-glucuronosyltransferase 2B7T62815SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T13260DI0062Breast cancer[ICD-11: 2C60-2C6Y]P11511CYP19A1
    T13260DI0108Cushing syndrome[ICD-11: 5A70]P11511CYP19A1

    Copyright © 2025