bismurrangatin



Compound IDCDAMM00531
Common namebismurrangatin
IUPAC name8-[2-hydroxy-1-[2-hydroxy-1-(7-methoxy-2-oxochromen-8-yl)-3-methylbut-3-enoxy]-3-methylbut-3-enyl]-7-methoxychromen-2-one
Molecular formulaC30H30O9

Experimental data

Retention time13.46
Adduct[M+H]+
Actual mz535.196
Theoretical mz535.196
Error0.42
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.9998

Identifiers and class information

Inchi keyHWGBLAJNKCZKTN-JQYHKRKISA-N
SmilesO=C1OC2=C(C=C1)C=CC(OC)=C2C(OC(C3=C(OC)C=CC=4C=CC(=O)OC43)C(O)C(=C)C)C(O)C(=C)C
SuperclassPhenylpropanoids and polyketides
ClassCoumarins and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)12
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)534.562
Computed dipole moment(dipole)9.712
Total solvent accessible surface area (SASA)724.728
Hydrophobic component of SASA (FOSA)308.957
Hydrophilic component of SASA (FISA)124.684
Pie component of the SASA (PISA)291.086
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1520.11
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)11.6
Free energy of solvation of dipole (dip^2/V)0.0620475
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0226359
Globularity descriptor (glob)0.882213
Predicted polarizability in cubic angstroms (QPpolrz)49.756
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.494
Predicted octanol/gas partition coefficient (QPlogPoct)26.8
Predicted water/gas partition coefficient (QPlogPw)15.999
Predicted octanol/water partition coefficient (QPlogPo/w)3.445
Predicted aqueous solubility (QPlogS)-3.383
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.585
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.826
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)650.909
Predicted brain/blood partition coefficient (QPlogBB)-1.228
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)311.019
Predicted skin permeability, log Kp (QPlogKp)-1.64
PM3 calculated ionization potential (IP(ev))9.065
PM3 calculated electron affinity (EA(eV))1.063
Number of likely metabolic reactions (#metab)9
Prediction of binding to human serum albumin (QPlogKhsa)0.031
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)84.517
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)130.49
Number of nitrogen and oxygen atoms (#NandO)9
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q16790CA9Carbonic anhydrase IXT64567SEA
P43166CA7Carbonic anhydrase VIIT37541SEA
O14980XPO1Exportin-1T51407SEA
Q16678CYP1B1Cytochrome P450 1B1T92521SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T64567DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]Q16790CA9
T51407DI0234Liposarcoma[ICD-11: 2B59]O14980XPO1
T51407DI0274Multiple myeloma[ICD-11: 2A83]O14980XPO1
T51407DI0395Stomach cancer[ICD-11: 2B72]O14980XPO1

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