Alamarine



Compound IDCDAMM00501
Common nameAlamarine
IUPAC name2-hydroxy-12-(1-hydroxyethyl)-3-methoxy-5,6-dihydroisoquinolino[2,1-b][2,7]naphthyridin-8-one
Molecular formulaC19H18N2O4

Experimental data

Retention time12.27
Adduct[M+H]+
Actual mz339.134
Theoretical mz339.134
Error0.66
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score8.5008

Identifiers and class information

Inchi keyHDIPTJUHEOGXQC-UEQNJFAPNA-N
SmilesO=C1C2=CN=CC(=C2C=C3C=4C=C(O)C(OC)=CC4CCN13)C(O)C
SuperclassOrganoheterocyclic compounds
ClassDiazanaphthalenes

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)4
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)338.362
Computed dipole moment(dipole)6.173
Total solvent accessible surface area (SASA)586.726
Hydrophobic component of SASA (FOSA)264.99
Hydrophilic component of SASA (FISA)169.379
Pie component of the SASA (PISA)152.356
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1035.34
Number of hydrogen bond donors (donorHB)2
Number of hydrogen bond acceptors (accptHB)7.7
Free energy of solvation of dipole (dip^2/V)0.0368006
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0185597
Globularity descriptor (glob)0.843563
Predicted polarizability in cubic angstroms (QPpolrz)34.167
Predicted hexadecane/gas partition coefficient (QPlogPC16)10.549
Predicted octanol/gas partition coefficient (QPlogPoct)18.795
Predicted water/gas partition coefficient (QPlogPw)12.951
Predicted octanol/water partition coefficient (QPlogPo/w)1.529
Predicted aqueous solubility (QPlogS)-3.705
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.014
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.79
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)245.288
Predicted brain/blood partition coefficient (QPlogBB)-1.264
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)108.308
Predicted skin permeability, log Kp (QPlogKp)-3.72
PM3 calculated ionization potential (IP(ev))8.781
PM3 calculated electron affinity (EA(eV))1.068
Number of likely metabolic reactions (#metab)6
Prediction of binding to human serum albumin (QPlogKhsa)-0.171
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)78.671
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)93.538
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P21728DRD1Dopamine D1 receptorT22118SEA
Q9NQS5GPR84G-protein coupled receptor 84T98091SEA
Q9NXA8SIRT5NAD-dependent deacetylase sirtuin-5T91940SEA
O15439ABCC4Multidrug resistance protein 4T39919SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T22118DI0003Abortion[ICD-11: JA00]P21728DRD1
T22118DI0022Allergic/hypersensitivity disorder[ICD-11: 4A80-4A8Z]P21728DRD1
T22118DI0190Hypertension[ICD-11: BA00-BA04]P21728DRD1
T22118DI0331Parkinsonism[ICD-11: 8A00]P21728DRD1
T98091DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]Q9NQS5GPR84
T98091DI0417Type 2 diabetes mellitus[ICD-11: 5A11]Q9NQS5GPR84

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