Ipomoeamarone;(+)-Ngaione



Compound IDCDAMM00472
Common nameIpomoeamarone;(+)-Ngaione
IUPAC name1-[5-(furan-3-yl)-2-methyloxolan-2-yl]-4-methylpentan-2-one
Molecular formulaC15H22O3

Experimental data

Retention time10.2
Adduct[M+H]+
Actual mz251.167
Theoretical mz251.164
Error10.85
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.787

Identifiers and class information

Inchi keyWOFDWNOSFDVCDF-PVRQQBJHNA-N
SmilesO=C(CC(C)C)CC1(OC(C2=COC=C2)CC1)C
SuperclassOrganoheterocyclic compounds
ClassHeteroaromatic compounds

Plant source

  • Piper longum L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)0
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)0
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)4
    Number of reactive functional groups (#rtvFG)1
    Predicted central nervous system activity (CNS)1
    Molecular weight (mol_MW)250.337
    Computed dipole moment(dipole)5.243
    Total solvent accessible surface area (SASA)519.183
    Hydrophobic component of SASA (FOSA)372.358
    Hydrophilic component of SASA (FISA)19.546
    Pie component of the SASA (PISA)127.279
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)903.961
    Number of hydrogen bond donors (donorHB)0
    Number of hydrogen bond acceptors (accptHB)3.25
    Free energy of solvation of dipole (dip^2/V)0.0304087
    Index of cohesive interaction in solids (ACxDN^.5/SA)0
    Globularity descriptor (glob)0.870853
    Predicted polarizability in cubic angstroms (QPpolrz)28.67
    Predicted hexadecane/gas partition coefficient (QPlogPC16)7.694
    Predicted octanol/gas partition coefficient (QPlogPoct)10.739
    Predicted water/gas partition coefficient (QPlogPw)4.286
    Predicted octanol/water partition coefficient (QPlogPo/w)3.624
    Predicted aqueous solubility (QPlogS)-3.703
    Conformation-independent predicted aqueous solubility (CIQPlogS)-3.222
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.229
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)6464.68
    Predicted brain/blood partition coefficient (QPlogBB)0.151
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)3719.25
    Predicted skin permeability, log Kp (QPlogKp)-1.047
    PM3 calculated ionization potential (IP(ev))9.15
    PM3 calculated electron affinity (EA(eV))-0.616
    Number of likely metabolic reactions (#metab)5
    Prediction of binding to human serum albumin (QPlogKhsa)0.203
    Predicted qualitative human oral absorption (HumanOralAbsorption)3
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)100
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)39.63
    Number of nitrogen and oxygen atoms (#NandO)3
    Number of violations of Lipinski’s rule of five (RuleOfFive)0
    Number of violations of Jorgensen’s rule of three (RuleOfThree)0

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source
    P41145OPRK1Kappa Opioid receptorT60693SEA
    P04792HSPB1Heat shock protein beta-1T39921SEA

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
    T60693DI0304Non-specific cutaneous vascular symptom[ICD-11: ME64]P41145OPRK1
    T60693DI0324Pain[ICD-11: MG30-MG3Z]P41145OPRK1
    T60693DI0349Pruritus[ICD-11: EC90]P41145OPRK1
    T39921DI0037Asthma[ICD-11: CA23]P04792HSPB1

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