5,7,3’,4’,5’-Pentahydroxy-3,6,8-trimethoxyflavone



Compound IDCDAMM00420
Common name5,7,3’,4’,5’-Pentahydroxy-3,6,8-trimethoxyflavone
IUPAC name5,7-dihydroxy-3,6,8-trimethoxy-2-(3,4,5-trihydroxyphenyl)chromen-4-one
Molecular formulaC18H16O10

Experimental data

Retention time25.027
Adduct[M+H]+
Actual mz393.083
Theoretical mz393.082
Error2.99
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.45

Identifiers and class information

Inchi keySTOZTZBHYTVXHP-UHFFFAOYSA-N
SmilesCOC1=C(C(=C2C(=C1O)C(=O)C(=C(O2)C3=CC(=C(C(=C3)O)O)O)OC)OC)O
SuperclassPhenylpropanoids and polyketides
ClassFlavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)8
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)392.318
Computed dipole moment(dipole)3.126
Total solvent accessible surface area (SASA)599.363
Hydrophobic component of SASA (FOSA)241.41
Hydrophilic component of SASA (FISA)257.173
Pie component of the SASA (PISA)100.78
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1075.14
Number of hydrogen bond donors (donorHB)4
Number of hydrogen bond acceptors (accptHB)7.5
Free energy of solvation of dipole (dip^2/V)0.0090895
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0250266
Globularity descriptor (glob)0.846805
Predicted polarizability in cubic angstroms (QPpolrz)32.699
Predicted hexadecane/gas partition coefficient (QPlogPC16)11.645
Predicted octanol/gas partition coefficient (QPlogPoct)20.942
Predicted water/gas partition coefficient (QPlogPw)15.077
Predicted octanol/water partition coefficient (QPlogPo/w)0.905
Predicted aqueous solubility (QPlogS)-3.241
Conformation-independent predicted aqueous solubility (CIQPlogS)-4.999
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.491
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)36.069
Predicted brain/blood partition coefficient (QPlogBB)-2.31
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)13.639
Predicted skin permeability, log Kp (QPlogKp)-5.136
PM3 calculated ionization potential (IP(ev))9.003
PM3 calculated electron affinity (EA(eV))0.847
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)-0.261
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)60.117
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)159.088
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P43166CA7Carbonic anhydrase VIIT37541SEA
P09917ALOX5Arachidonate 5-lipoxygenaseT00140SEA
P33527ABCC1Multidrug resistance-associated protein 1T11288SEA
P08183ABCB1P-glycoprotein 1T25258SEA
P18054ALOX12Arachidonate 12-lipoxygenaseT35527SEA
O14746TERTTelomerase reverse transcriptaseT86052SEA
Q9UNQ0ABCG2ATP-binding cassette sub-family G member 2T56556SEA
Q9NPH5NOX4NADPH oxidase 4T29741SEA
P47989XDHXanthine dehydrogenaseT40954SEA
Q16678CYP1B1Cytochrome P450 1B1T92521SEA
Q04760GLO1Glyoxalase IT88285SEA
Q9UNI1CELA1Elastase 1T22839SEA
Q9HC98NEK6Serine/threonine-protein kinase NEK6T78992SEA
O60285NUAK1NUAK family SNF1-like kinase 1T21653SEA
P16152CBR1Carbonyl reductase [NADPH] 1T70518SEA
Q13332PTPRSReceptor-type tyrosine-protein phosphatase ST10147SEA
O35273SMAD3Mothers against decapentaplegic homolog 3T35445SEA
P16220CREB1Cyclic AMP-responsive element-binding proteinT92098SEA
Q15717ELAVL1ELAV-like protein 1T78349SEA
Q9UK17KCND3Voltage-gated potassium channel Kv4.3T74500SEA
H3BPQ1TCF4Transcription factor 7-like 2T54646SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T00140DI0037Asthma[ICD-11: CA23]P09917ALOX5
T00140DI0147Filariasis[ICD-11: 1F66]P09917ALOX5
T00140DI0403Thrombocytopenia[ICD-11: 3B64]P09917ALOX5
T11288DI0167Gout[ICD-11: FA25]P33527ABCC1
T25258DI0238Lung cancer[ICD-11: 2C25]P08183ABCB1
T86052DI0184Human immunodeficiency virus disease[ICD-11: 1C60-1C62]O14746TERT
T86052DI0284Myelodysplastic syndrome[ICD-11: 2A37]O14746TERT
T86052DI0326Pancreatic cancer[ICD-11: 2C10]O14746TERT
T56556DI0218Irritable bowel syndrome[ICD-11: DD91]Q9UNQ0ABCG2
T56556DI0366Rheumatoid arthritis[ICD-11: FA20]Q9UNQ0ABCG2
T29741DI0146Fibrosis[ICD-11: GA14-GC01]Q9NPH5NOX4
T40954DI0206Inborn purine/pyrimidine/nucleotide metabolism error[ICD-11: 5C55]P47989XDH
T40954DI0266Mineral deficiency[ICD-11: 5B5K]P47989XDH
T88285DI0210Influenza[ICD-11: 1E30-1E32]Q04760GLO1
T22839DI0024Alpha-1-antitrypsin deficiency[ICD-11: 5C5A]Q9UNI1CELA1
T22839DI0065Bronchitis[ICD-11: CA20]Q9UNI1CELA1
T70518DI0037Asthma[ICD-11: CA23]P16152CBR1
T10147DI0057Bone paget disease[ICD-11: FB85]Q13332PTPRS
T35445DI0226Kidney fibrosis[ICD-11: GC01]O35273SMAD3
T74500DI0004Acidosis[ICD-11: 5C73]Q9UK17KCND3

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