Coerulescine



Compound IDCDAMM00408
Common nameCoerulescine
IUPAC name(3R)-1'-methylspiro[1H-indole-3,3'-pyrrolidine]-2-one
Molecular formulaC12H14N2O

Experimental data

Retention time19.393
Adduct[M+H]+
Actual mz203.119
Theoretical mz203.118
Error5.96
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.43

Identifiers and class information

Inchi keyPNYGHERLKSFRMH-STGVRZAANA-N
SmilesCN1CC[C@]2(C1)C3=CC=CC=C3NC2=O
SuperclassOrganoheterocyclic compounds
ClassIndoles and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)1
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)0
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)1
Molecular weight (mol_MW)202.255
Computed dipole moment(dipole)4.606
Total solvent accessible surface area (SASA)428.755
Hydrophobic component of SASA (FOSA)193.302
Hydrophilic component of SASA (FISA)72.617
Pie component of the SASA (PISA)162.837
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)711.973
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)4.5
Free energy of solvation of dipole (dip^2/V)0.0297969
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0104955
Globularity descriptor (glob)0.899355
Predicted polarizability in cubic angstroms (QPpolrz)23.894
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.821
Predicted octanol/gas partition coefficient (QPlogPoct)11.677
Predicted water/gas partition coefficient (QPlogPw)8.25
Predicted octanol/water partition coefficient (QPlogPo/w)1.075
Predicted aqueous solubility (QPlogS)-1.414
Conformation-independent predicted aqueous solubility (CIQPlogS)-1.093
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.663
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)506.025
Predicted brain/blood partition coefficient (QPlogBB)0.363
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)262.105
Predicted skin permeability, log Kp (QPlogKp)-4.347
PM3 calculated ionization potential (IP(ev))8.87
PM3 calculated electron affinity (EA(eV))0.127
Number of likely metabolic reactions (#metab)1
Prediction of binding to human serum albumin (QPlogKhsa)-0.248
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)81.641
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)46.4
Number of nitrogen and oxygen atoms (#NandO)3
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P34969HTR7Serotonin 7 (5-HT7) receptorT79062SEA
P41146OPRL1Nociceptin receptorT52921SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T79062DI0025Alzheimer disease[ICD-11: 8A20]P34969HTR7
T79062DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]P34969HTR7
T79062DI0051Bipolar disorder[ICD-11: 6A60]P34969HTR7
T79062DI0117Depression[ICD-11: 6A70-6A7Z]P34969HTR7
T79062DI0265Mild neurocognitive disorder[ICD-11: 6D71]P34969HTR7
T79062DI0331Parkinsonism[ICD-11: 8A00]P34969HTR7
T79062DI0370Schizophrenia[ICD-11: 6A20]P34969HTR7
T52921DI0039Atopic eczema[ICD-11: EA80]P41146OPRL1
T52921DI0117Depression[ICD-11: 6A70-6A7Z]P41146OPRL1
T52921DI0173Headache[ICD-11: 8A80-8A84]P41146OPRL1
T52921DI0175Heart failure[ICD-11: BD10-BD1Z]P41146OPRL1

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