Hydrocotarnine



Compound IDCDAMM00372
Common nameHydrocotarnine
IUPAC name4-methoxy-6-methyl-7,8-dihydro-5H-[1,3]dioxolo[4,5-g]isoquinoline
Molecular formulaC12H15NO3

Experimental data

Retention time10.642
Adduct[M+H]+
Actual mz222.114
Theoretical mz222.112
Error5.09
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score8.21

Identifiers and class information

Inchi keyXXANNZJIZQTCBP-UHFFFAOYSA-N
SmilesO(C=1C=2OCOC2C=C3C1CN(C)CC3)C
SuperclassOrganoheterocyclic compounds
ClassTetrahydroisoquinolines

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)1
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)1
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)2
Molecular weight (mol_MW)221.255
Computed dipole moment(dipole)2.869
Total solvent accessible surface area (SASA)415.399
Hydrophobic component of SASA (FOSA)344.92
Hydrophilic component of SASA (FISA)6.868
Pie component of the SASA (PISA)63.611
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)710.849
Number of hydrogen bond donors (donorHB)0
Number of hydrogen bond acceptors (accptHB)4.25
Free energy of solvation of dipole (dip^2/V)0.0115832
Index of cohesive interaction in solids (ACxDN^.5/SA)0
Globularity descriptor (glob)0.927295
Predicted polarizability in cubic angstroms (QPpolrz)22.26
Predicted hexadecane/gas partition coefficient (QPlogPC16)5.652
Predicted octanol/gas partition coefficient (QPlogPoct)8.81
Predicted water/gas partition coefficient (QPlogPw)5.164
Predicted octanol/water partition coefficient (QPlogPo/w)1.363
Predicted aqueous solubility (QPlogS)-0.481
Conformation-independent predicted aqueous solubility (CIQPlogS)-1.272
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.738
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)2126.53
Predicted brain/blood partition coefficient (QPlogBB)0.848
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1237.1
Predicted skin permeability, log Kp (QPlogKp)-3.389
PM3 calculated ionization potential (IP(ev))8.85
PM3 calculated electron affinity (EA(eV))-0.015
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-0.498
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)94.485
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)32.934
Number of nitrogen and oxygen atoms (#NandO)4
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P13726F3Coagulation factor VII/tissue factorT72702SEA
P21728DRD1Dopamine D1 receptorT22118SEA
P21918DRD5Dopamine D5 receptorT46828SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T72702DI0075Cervical cancer[ICD-11: 2C77]P13726F3
T22118DI0003Abortion[ICD-11: JA00]P21728DRD1
T22118DI0022Allergic/hypersensitivity disorder[ICD-11: 4A80-4A8Z]P21728DRD1
T22118DI0190Hypertension[ICD-11: BA00-BA04]P21728DRD1
T22118DI0331Parkinsonism[ICD-11: 8A00]P21728DRD1
T46828DI0022Allergic/hypersensitivity disorder[ICD-11: 4A80-4A8Z]P21918DRD5

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