Valerenic acid



Compound IDCDAMM00319
Common nameValerenic acid
IUPAC name(E)-3-[(4S,7R,7aR)-3,7-dimethyl-2,4,5,6,7,7a-hexahydro-1H-inden-4-yl]-2-methylprop-2-enoic acid
Molecular formulaC15H22O2

Experimental data

Retention time6.544
Adduct[M+H]+
Actual mz235.166
Theoretical mz235.169
Error12.99
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score8.03

Identifiers and class information

Inchi keyFEBNTWHYQKGEIQ-DHZHZOJONA-N
SmilesO=C(O)C(=CC1C2=C(C)CCC2C(C)CC1)C
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Plant source

  • Pedalium murex L.
  • Pharmacokinetic properties

    Number of descriptor values(#stars)0
    Number of non-conjugated amine groups (#amine)0
    Number of amidine and guanidine groups (#amidine)0
    Number of carboxylic acid groups (#acid)1
    Number of non-conjugated amide groups (#amide)0
    Number of rotatable bonds (#rotor)2
    Number of reactive functional groups (#rtvFG)1
    Predicted central nervous system activity (CNS)-1
    Molecular weight (mol_MW)234.338
    Computed dipole moment(dipole)6.341
    Total solvent accessible surface area (SASA)485.252
    Hydrophobic component of SASA (FOSA)381.076
    Hydrophilic component of SASA (FISA)99.423
    Pie component of the SASA (PISA)4.752
    Weakly polar component of the SASA (WPSA)0
    Total solvent accesible volume (volume)855.463
    Number of hydrogen bond donors (donorHB)1
    Number of hydrogen bond acceptors (accptHB)2
    Free energy of solvation of dipole (dip^2/V)0.0470047
    Index of cohesive interaction in solids (ACxDN^.5/SA)0.0041216
    Globularity descriptor (glob)0.898116
    Predicted polarizability in cubic angstroms (QPpolrz)26.843
    Predicted hexadecane/gas partition coefficient (QPlogPC16)7.305
    Predicted octanol/gas partition coefficient (QPlogPoct)11.435
    Predicted water/gas partition coefficient (QPlogPw)4.589
    Predicted octanol/water partition coefficient (QPlogPo/w)3.618
    Predicted aqueous solubility (QPlogS)-4.05
    Conformation-independent predicted aqueous solubility (CIQPlogS)-3.211
    Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-1.396
    Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)286.202
    Predicted brain/blood partition coefficient (QPlogBB)-0.379
    Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)162.748
    Predicted skin permeability, log Kp (QPlogKp)-3.143
    PM3 calculated ionization potential (IP(ev))9.379
    PM3 calculated electron affinity (EA(eV))-0.101
    Number of likely metabolic reactions (#metab)5
    Prediction of binding to human serum albumin (QPlogKhsa)0.314
    Predicted qualitative human oral absorption (HumanOralAbsorption)3
    Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)92.101
    Solvent-accessible surface area of fluorine atoms (SAFluorine)0
    Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
    Van der Waals surface area (PSA)49.792
    Number of nitrogen and oxygen atoms (#NandO)2
    Number of violations of Lipinski’s rule of five (RuleOfFive)0
    Number of violations of Jorgensen’s rule of three (RuleOfThree)0

    Compound-target network

    Cytoscape Graph

    Protein targets associated with phytocompound

    Uniprot ID Gene name Target name TTD_ID Prediction source

    Target associated diseases

    TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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