N-({3,4-dihydroxy-1-[(2-methoxyethoxy)methyl]cyclopentyl}methyl)-1,2-oxazole-5-carboxamide



Compound IDCDAMM00239
Common nameN-({3,4-dihydroxy-1-[(2-methoxyethoxy)methyl]cyclopentyl}methyl)-1,2-oxazole-5-carboxamide
IUPAC nameN-[[3,4-dihydroxy-1-(2-methoxyethoxymethyl)cyclopentyl]methyl]-1,2-oxazole-5-carboxamide
Molecular formulaC14H22N2O6

Experimental data

Retention time49.35
Adduct[M+H]+
Actual mz315.155
Theoretical mz315.155
Error0.19
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.7547

Identifiers and class information

Inchi keyXNSYGDYPBZVWJL-UHFFFAOYSA-N
SmilesCOCCOCC1(CC(C(C1)O)O)CNC(=O)C2=CC=NO2
SuperclassOrganic acids and derivatives
ClassCarboxylic acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)10
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)314.338
Computed dipole moment(dipole)3.303
Total solvent accessible surface area (SASA)600.502
Hydrophobic component of SASA (FOSA)302.938
Hydrophilic component of SASA (FISA)196.825
Pie component of the SASA (PISA)100.739
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1032.36
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)10.8
Free energy of solvation of dipole (dip^2/V)0.0105662
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0311508
Globularity descriptor (glob)0.822629
Predicted polarizability in cubic angstroms (QPpolrz)29.702
Predicted hexadecane/gas partition coefficient (QPlogPC16)10.536
Predicted octanol/gas partition coefficient (QPlogPoct)19.776
Predicted water/gas partition coefficient (QPlogPw)16.014
Predicted octanol/water partition coefficient (QPlogPo/w)0.009
Predicted aqueous solubility (QPlogS)-2.223
Conformation-independent predicted aqueous solubility (CIQPlogS)-1.857
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.882
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)134.712
Predicted brain/blood partition coefficient (QPlogBB)-1.978
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)56.668
Predicted skin permeability, log Kp (QPlogKp)-3.832
PM3 calculated ionization potential (IP(ev))10.146
PM3 calculated electron affinity (EA(eV))1.074
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-0.902
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)65.108
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)124.825
Number of nitrogen and oxygen atoms (#NandO)8
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P55085F2RL1Proteinase-activated receptor 2T62841SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T62841DI0087Chronic pain[ICD-11: MG30]P55085F2RL1

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