2-{4,6,7-trihydroxy-9-[(15-hydroxydocos-16-enoyl)oxy]decanamido}ethane-1-sulfonic acid



Compound IDCDAMM00228
Common name2-{4,6,7-trihydroxy-9-[(15-hydroxydocos-16-enoyl)oxy]decanamido}ethane-1-sulfonic acid
IUPAC name2-[[4,6,7-trihydroxy-9-(15-hydroxydocos-16-enoyloxy)decanoyl]amino]ethanesulfonic acid
Molecular formulaC34H65NO10S

Experimental data

Retention time37.69
Adduct[M+H]+
Actual mz680.441
Theoretical mz680.44
Error0.6
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.0106

Identifiers and class information

Inchi keyLCMJGVARRXLCMN-FOSCLWGBNA-N
SmilesCCCCCC=CC(CCCCCCCCCCCCCC(=O)OC(C)CC(C(CC(CCC(=O)NCCS(=O)(=O)O)O)O)O)O
SuperclassLipids and lipid-like molecules
ClassFatty Acyls

Pharmacokinetic properties

Number of descriptor values(#stars)11
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)1
Number of rotatable bonds (#rotor)36
Number of reactive functional groups (#rtvFG)1
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)679.948
Computed dipole moment(dipole)6.93
Total solvent accessible surface area (SASA)1333.17
Hydrophobic component of SASA (FOSA)976.977
Hydrophilic component of SASA (FISA)340.126
Pie component of the SASA (PISA)13.894
Weakly polar component of the SASA (WPSA)2.172
Total solvent accesible volume (volume)2413.87
Number of hydrogen bond donors (donorHB)5
Number of hydrogen bond acceptors (accptHB)14.3
Free energy of solvation of dipole (dip^2/V)0.0198974
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0239848
Globularity descriptor (glob)0.652765
Predicted polarizability in cubic angstroms (QPpolrz)67.466
Predicted hexadecane/gas partition coefficient (QPlogPC16)26.606
Predicted octanol/gas partition coefficient (QPlogPoct)36.978
Predicted water/gas partition coefficient (QPlogPw)20.881
Predicted octanol/water partition coefficient (QPlogPo/w)5.204
Predicted aqueous solubility (QPlogS)-7.602
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.363
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.035
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)0.893
Predicted brain/blood partition coefficient (QPlogBB)-6.922
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)0.57
Predicted skin permeability, log Kp (QPlogKp)-4.283
PM3 calculated ionization potential (IP(ev))9.416
PM3 calculated electron affinity (EA(eV))0.231
Number of likely metabolic reactions (#metab)7
Prediction of binding to human serum albumin (QPlogKhsa)-0.095
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)4.7
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)28.071
Van der Waals surface area (PSA)210.51
Number of nitrogen and oxygen atoms (#NandO)11
Number of violations of Lipinski’s rule of five (RuleOfFive)4
Number of violations of Jorgensen’s rule of three (RuleOfThree)3

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P34913EPHX2Epoxide hydrataseT35734SEA
O00519FAAHAnandamide amidohydrolaseT11754SEA
Q8TDU6GPBAR1G-protein coupled bile acid receptor 1T86273SEA
P16109SELPP-selectinT10965SEA
Q9HBW0LPAR2Lysophosphatidic acid receptor Edg-4T39380SEA
P43657LPAR6Lysophosphatidic acid receptor 6T13484SEA
Q14973SLC10A1Bile acid transporterT99189SEA
Q9UPC5GPR34Probable G-protein coupled receptor 34T73859SEA
O00398P2RY10Putative P2Y purinoceptor 10T00488SEA
Q9BXC1GPR174Probable G-protein coupled receptor 174T87661SEA
Q9UBY5LPAR3Lysophosphatidic acid receptor Edg-7T95923SEA
Q92633LPAR1Lysophosphatidic acid receptor Edg-2T92640SEA
Q99677LPAR4Lysophosphatidic acid receptor 4T58130SEA
O60603TLR2Toll-like receptor 2T82078SEA
Q92887CMOATMultidrug resistance-associated protein 2T61792SEA
O15439ABCC4Multidrug resistance protein 4T39919SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T35734DI0086Chronic obstructive pulmonary disease[ICD-11: CA22]P34913EPHX2
T35734DI0190Hypertension[ICD-11: BA00-BA04]P34913EPHX2
T11754DI0101Corneal disease[ICD-11: 9A76-9A78]O00519FAAH
T86273DI0417Type 2 diabetes mellitus[ICD-11: 5A11]Q8TDU6GPBAR1
T10965DI0088Circulatory system disease[ICD-11: BE2Z]P16109SELP
T10965DI0381Sickle-cell disorder[ICD-11: 3A51]P16109SELP
T99189DI0179Hepatitis virus infection[ICD-11: 1E50-1E51]Q14973SLC10A1
T95923DI0146Fibrosis[ICD-11: GA14-GC01]Q9UBY5LPAR3
T95923DI0399Systemic sclerosis[ICD-11: 4A42]Q9UBY5LPAR3
T92640DI0146Fibrosis[ICD-11: GA14-GC01]Q92633LPAR1
T92640DI0199Idiopathic interstitial pneumonitis[ICD-11: CB03]Q92633LPAR1
T92640DI0351Psoriasis[ICD-11: EA90]Q92633LPAR1
T92640DI0399Systemic sclerosis[ICD-11: 4A42]Q92633LPAR1
T82078DI0346Prostate cancer[ICD-11: 2C82]O60603TLR2

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