Guangsangon I



Compound IDCDAMM00225
Common nameGuangsangon I
IUPAC name2-[3-[(1R,5S,6R)-6-(2,4-dihydroxybenzoyl)-5-(2,4-dihydroxyphenyl)-3-methylcyclohex-2-en-1-yl]-2,4-dihydroxyphenyl]-3,7-dihydroxychromen-4-one
Molecular formulaC35H28O11

Experimental data

Retention time33.4
Adduct[M+H]+
Actual mz625.171
Theoretical mz625.17
Error1.07
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score4.6841

Identifiers and class information

Inchi keyKSOIBBCWPBLVNS-LSWXLTRLNA-N
SmilesCC1=CC(C(C(C1)C2=C(C=C(C=C2)O)O)C(=O)C3=C(C=C(C=C3)O)O)C4=C(C=CC(=C4O)C5=C(C(=O)C6=C(O5)C=C(C=C6)O)O)O
SuperclassPhenylpropanoids and polyketides
ClassFlavonoids

Pharmacokinetic properties

Number of descriptor values(#stars)7
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)10
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)624.6
Computed dipole moment(dipole)6.147
Total solvent accessible surface area (SASA)814
Hydrophobic component of SASA (FOSA)120.761
Hydrophilic component of SASA (FISA)356.444
Pie component of the SASA (PISA)336.794
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1641.75
Number of hydrogen bond donors (donorHB)7
Number of hydrogen bond acceptors (accptHB)9.5
Free energy of solvation of dipole (dip^2/V)0.0230169
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0308779
Globularity descriptor (glob)0.826821
Predicted polarizability in cubic angstroms (QPpolrz)56.344
Predicted hexadecane/gas partition coefficient (QPlogPC16)19.741
Predicted octanol/gas partition coefficient (QPlogPoct)35.819
Predicted water/gas partition coefficient (QPlogPw)23.797
Predicted octanol/water partition coefficient (QPlogPo/w)2.577
Predicted aqueous solubility (QPlogS)-5.316
Conformation-independent predicted aqueous solubility (CIQPlogS)-9.254
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.94
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)4.128
Predicted brain/blood partition coefficient (QPlogBB)-3.515
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.31
Predicted skin permeability, log Kp (QPlogKp)-5.942
PM3 calculated ionization potential (IP(ev))8.868
PM3 calculated electron affinity (EA(eV))1.035
Number of likely metabolic reactions (#metab)13
Prediction of binding to human serum albumin (QPlogKhsa)0.464
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)14.181
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)216.279
Number of nitrogen and oxygen atoms (#NandO)11
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q13332PTPRSReceptor-type tyrosine-protein phosphatase ST10147SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T10147DI0057Bone paget disease[ICD-11: FB85]Q13332PTPRS

Copyright © 2025