(S)-Multifidol 2-[apiosyl-(1->6)-glucoside]



Compound IDCDAMM00213
Common name(S)-Multifidol 2-[apiosyl-(1->6)-glucoside]
IUPAC name1-[2-[6-[[3,4-dihydroxy-4-(hydroxymethyl)oxolan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-4,6-dihydroxyphenyl]-2-methylbutan-1-one
Molecular formulaC22H32O13

Experimental data

Retention time23.93
Adduct[M+K]+
Actual mz543.147
Theoretical mz543.147
Error0.99
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score4.7254

Identifiers and class information

Inchi keyMXXCYHQPSVRPOP-UHFFFAOYNA-N
SmilesCCC(C)C(=O)C1=C(C=C(C=C1OC2C(C(C(C(O2)COC3C(C(CO3)(CO)O)O)O)O)O)O)O
SuperclassOrganic oxygen compounds
ClassOrganooxygen compounds

Pharmacokinetic properties

Number of descriptor values(#stars)5
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)17
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)504.487
Computed dipole moment(dipole)6.275
Total solvent accessible surface area (SASA)740.769
Hydrophobic component of SASA (FOSA)369.663
Hydrophilic component of SASA (FISA)310.159
Pie component of the SASA (PISA)60.947
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1413.92
Number of hydrogen bond donors (donorHB)7
Number of hydrogen bond acceptors (accptHB)17.6
Free energy of solvation of dipole (dip^2/V)0.0278507
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0628606
Globularity descriptor (glob)0.822428
Predicted polarizability in cubic angstroms (QPpolrz)40.097
Predicted hexadecane/gas partition coefficient (QPlogPC16)15.522
Predicted octanol/gas partition coefficient (QPlogPoct)33.53
Predicted water/gas partition coefficient (QPlogPw)27.864
Predicted octanol/water partition coefficient (QPlogPo/w)-1.438
Predicted aqueous solubility (QPlogS)-1.744
Conformation-independent predicted aqueous solubility (CIQPlogS)-2.882
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.696
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)11.341
Predicted brain/blood partition coefficient (QPlogBB)-3.518
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)3.905
Predicted skin permeability, log Kp (QPlogKp)-5.389
PM3 calculated ionization potential (IP(ev))9.405
PM3 calculated electron affinity (EA(eV))0.176
Number of likely metabolic reactions (#metab)9
Prediction of binding to human serum albumin (QPlogKhsa)-1.274
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)0
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)214.392
Number of nitrogen and oxygen atoms (#NandO)13
Number of violations of Lipinski’s rule of five (RuleOfFive)3
Number of violations of Jorgensen’s rule of three (RuleOfThree)2

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q9NUW8TDP1Tyrosyl-DNA phosphodiesterase 1T33492SEA
P14679TYRTyrosinaseT97035SEA
Q9GZQ4NMUR2Neuromedin-U receptor 2T04210SEA
Q9NZ08ERAP1Endoplasmic reticulum aminopeptidase 1T72849SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T97035DI0007Acquired hypermelanosis[ICD-11: ED60]P14679TYR
T97035DI0008Acquired hypomelanotic disorder[ICD-11: ED63]P14679TYR

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