LSM-42140



Compound IDCDAMM00200
Common nameLSM-42140
IUPAC name(3R)-3-(2-hydroxyethyl)-2-N-propan-2-yl-4-(3-prop-1-enylphenyl)-6-N-(1,3-thiazol-2-yl)-1,3-dihydropyrrolo[3,4-c]pyridine-2,6-dicarboxamide
Molecular formulaC26H29N5O3S

Experimental data

Retention time42.09
Adduct[M+H]+
Actual mz492.206
Theoretical mz492.206
Error1.17
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.9974

Identifiers and class information

Inchi keyOXPQEJWZASRCPK-RNZRUAGMNA-N
SmilesCC=CC1=CC(=CC=C1)C2=C3C(N(CC3=CC(=N2)C(=O)NC4=NC=CS4)C(=O)NC(C)C)CCO
SuperclassOrganoheterocyclic compounds
ClassPyridines and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)1
Number of rotatable bonds (#rotor)8
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)491.607
Computed dipole moment(dipole)11.054
Total solvent accessible surface area (SASA)856.48
Hydrophobic component of SASA (FOSA)355.121
Hydrophilic component of SASA (FISA)161.143
Pie component of the SASA (PISA)288.756
Weakly polar component of the SASA (WPSA)51.46
Total solvent accesible volume (volume)1552.08
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)8.7
Free energy of solvation of dipole (dip^2/V)0.0787229
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0175939
Globularity descriptor (glob)0.756931
Predicted polarizability in cubic angstroms (QPpolrz)53.581
Predicted hexadecane/gas partition coefficient (QPlogPC16)17.156
Predicted octanol/gas partition coefficient (QPlogPoct)28.238
Predicted water/gas partition coefficient (QPlogPw)17.938
Predicted octanol/water partition coefficient (QPlogPo/w)3.858
Predicted aqueous solubility (QPlogS)-6.527
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.04
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.468
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)184.296
Predicted brain/blood partition coefficient (QPlogBB)-1.667
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)251.761
Predicted skin permeability, log Kp (QPlogKp)-2.704
PM3 calculated ionization potential (IP(ev))8.964
PM3 calculated electron affinity (EA(eV))1.107
Number of likely metabolic reactions (#metab)5
Prediction of binding to human serum albumin (QPlogKhsa)0.344
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)90.085
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)25.411
Van der Waals surface area (PSA)116.129
Number of nitrogen and oxygen atoms (#NandO)8
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P49137MAPKAPK2MAP kinase-activated protein kinase 2T21307SEA
P35557GCKHexokinase type IVT87166SEA
Q16637SMN2Survival motor neuron proteinT71907SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T21307DI0011Acute laryngitis/tracheitis[ICD-11: CA05]P49137MAPKAPK2
T21307DI0181Hidradenitis suppurativa[ICD-11: ED92]P49137MAPKAPK2
T21307DI0269Monogenic autoinflammatory syndrome[ICD-11: 4A60]P49137MAPKAPK2
T21307DI0334Peritoneal cancer[ICD-11: 2C51]P49137MAPKAPK2
T21307DI0352Psoriatic arthritis[ICD-11: FA21]P49137MAPKAPK2
T21307DI0366Rheumatoid arthritis[ICD-11: FA20]P49137MAPKAPK2
T21307DI0391Solid tumour/cancer[ICD-11: 2A00-2F9Z]P49137MAPKAPK2
T87166DI0009Acute diabete complication[ICD-11: 5A2Y]P35557GCK
T87166DI0120Diabetes mellitus[ICD-11: 5A10]P35557GCK
T87166DI0308Obesity[ICD-11: 5B80-5B81]P35557GCK
T87166DI0417Type 2 diabetes mellitus[ICD-11: 5A11]P35557GCK
T71907DI0279Muscular atrophy[ICD-11: 8B61]Q16637SMN2

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