1-[2-[1,5-dihydroxy-8-[3-(1H-indol-2-yl)prop-1-en-2-yl]-5-tricyclo[7.3.1.02,6]tridec-10-enyl]ethyl]-2-methylguanidine



Compound IDCDAMM00188
Common name1-[2-[1,5-dihydroxy-8-[3-(1H-indol-2-yl)prop-1-en-2-yl]-5-tricyclo[7.3.1.02,6]tridec-10-enyl]ethyl]-2-methylguanidine
IUPAC name1-[2-[1,5-dihydroxy-8-[3-(1H-indol-2-yl)prop-1-en-2-yl]-5-tricyclo[7.3.1.02,6]tridec-10-enyl]ethyl]-2-methylguanidine
Molecular formulaC28H38N4O2

Experimental data

Retention time37.52
Adduct[M+H]+
Actual mz463.307
Theoretical mz463.307
Error0.32
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score6.6121

Identifiers and class information

Inchi keyHMJPSFIAIIJVKC-UHFFFAOYSA-N
SmilesCN=C(N)NCCC1(CCC2C1CC(C3CC2(CC=C3)O)C(=C)CC4=CC5=CC=CC=C5N4)O
SuperclassLipids and lipid-like molecules
ClassPrenol lipids

Pharmacokinetic properties

Number of descriptor values(#stars)1
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)1
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)9
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-1
Molecular weight (mol_MW)462.634
Computed dipole moment(dipole)8.687
Total solvent accessible surface area (SASA)689.08
Hydrophobic component of SASA (FOSA)348.94
Hydrophilic component of SASA (FISA)110.964
Pie component of the SASA (PISA)229.176
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1396.28
Number of hydrogen bond donors (donorHB)6
Number of hydrogen bond acceptors (accptHB)3.5
Free energy of solvation of dipole (dip^2/V)0.0540415
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0124415
Globularity descriptor (glob)0.876752
Predicted polarizability in cubic angstroms (QPpolrz)46.135
Predicted hexadecane/gas partition coefficient (QPlogPC16)14.854
Predicted octanol/gas partition coefficient (QPlogPoct)26.708
Predicted water/gas partition coefficient (QPlogPw)13.941
Predicted octanol/water partition coefficient (QPlogPo/w)4.953
Predicted aqueous solubility (QPlogS)-4.812
Conformation-independent predicted aqueous solubility (CIQPlogS)-6.978
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-4.619
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)878.263
Predicted brain/blood partition coefficient (QPlogBB)-0.941
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)429.947
Predicted skin permeability, log Kp (QPlogKp)-3.956
PM3 calculated ionization potential (IP(ev))7.859
PM3 calculated electron affinity (EA(eV))-0.399
Number of likely metabolic reactions (#metab)8
Prediction of binding to human serum albumin (QPlogKhsa)0.783
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)95.672
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)94.657
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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