2-(1,3-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-7-yl)-N-(4,6-dimethylpyrimidin-2-yl)acetamide



Compound IDCDAMM00139
Common name2-(1,3-dimethyl-2,6-dioxo-2,3,6,7-tetrahydro-1H-purin-7-yl)-N-(4,6-dimethylpyrimidin-2-yl)acetamide
IUPAC name2-(1,3-dimethyl-2,6-dioxopurin-7-yl)-N-(4,6-dimethylpyrimidin-2-yl)acetamide
Molecular formulaC15H17N7O3

Experimental data

Retention time54.26
Adduct[M+H]+
Actual mz344.147
Theoretical mz344.147
Error2.73
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score5.2191

Identifiers and class information

Inchi keyIVDRGTJSKUSWEE-UHFFFAOYSA-N
SmilesCC1=CC(=NC(=N1)NC(=O)CN2C=NC3=C2C(=O)N(C(=O)N3C)C)C
SuperclassOrganoheterocyclic compounds
ClassImidazopyrimidines

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)3
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)343.344
Computed dipole moment(dipole)4.776
Total solvent accessible surface area (SASA)628.964
Hydrophobic component of SASA (FOSA)379.2
Hydrophilic component of SASA (FISA)148.48
Pie component of the SASA (PISA)101.284
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)1086.61
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)9.5
Free energy of solvation of dipole (dip^2/V)0.0209883
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0151042
Globularity descriptor (glob)0.812683
Predicted polarizability in cubic angstroms (QPpolrz)36.373
Predicted hexadecane/gas partition coefficient (QPlogPC16)10.268
Predicted octanol/gas partition coefficient (QPlogPoct)18.616
Predicted water/gas partition coefficient (QPlogPw)13.092
Predicted octanol/water partition coefficient (QPlogPo/w)1.631
Predicted aqueous solubility (QPlogS)-3.994
Conformation-independent predicted aqueous solubility (CIQPlogS)-3.33
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-5.046
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)387.134
Predicted brain/blood partition coefficient (QPlogBB)-1.116
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)177.369
Predicted skin permeability, log Kp (QPlogKp)-3.611
PM3 calculated ionization potential (IP(ev))9.192
PM3 calculated electron affinity (EA(eV))0.768
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)-0.426
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)82.814
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)128.416
Number of nitrogen and oxygen atoms (#NandO)10
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P29274ADORA2AAdenosine A2a receptorT77365SEA
P21397MAOAMonoamine oxidase AT83875SEA
P27338MAOBMonoamine oxidase BT83011SEA
P34969HTR7Serotonin 7 (5-HT7) receptorT79062SEA
P29275ADORA2BAdenosine A2b receptorT86679SEA
P30837ALDH1B1Acetaldehyde dehydrogenaseT99641SEA
Q9Y6Q9NCOA3Nuclear receptor coactivator 3T26774SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T77365DI0319Orthostatic hypotension[ICD-11: BA21]P29274ADORA2A
T77365DI0331Parkinsonism[ICD-11: 8A00]P29274ADORA2A
T77365DI0359Radionuclide imaging[ICD-11: N.A.]P29274ADORA2A
T83875DI0117Depression[ICD-11: 6A70-6A7Z]P21397MAOA
T83875DI0331Parkinsonism[ICD-11: 8A00]P21397MAOA
T83011DI0115Dementia[ICD-11: 6D80-6D8Z]P27338MAOB
T83011DI0117Depression[ICD-11: 6A70-6A7Z]P27338MAOB
T83011DI0190Hypertension[ICD-11: BA00-BA04]P27338MAOB
T83011DI0243Malaria[ICD-11: 1F40-1F45]P27338MAOB
T83011DI0264Migraine[ICD-11: 8A80]P27338MAOB
T83011DI0331Parkinsonism[ICD-11: 8A00]P27338MAOB
T79062DI0025Alzheimer disease[ICD-11: 8A20]P34969HTR7
T79062DI0040Attention deficit hyperactivity disorder[ICD-11: 6A05]P34969HTR7
T79062DI0051Bipolar disorder[ICD-11: 6A60]P34969HTR7
T79062DI0117Depression[ICD-11: 6A70-6A7Z]P34969HTR7
T79062DI0265Mild neurocognitive disorder[ICD-11: 6D71]P34969HTR7
T79062DI0331Parkinsonism[ICD-11: 8A00]P34969HTR7
T79062DI0370Schizophrenia[ICD-11: 6A20]P34969HTR7
T86679DI0180Herpes simplex infection[ICD-11: 1F00]P29275ADORA2B
T86679DI0397Supraventricular tachyarrhythmia[ICD-11: BC81]P29275ADORA2B
T99641DI0396Substance abuse[ICD-11: 6C40]P30837ALDH1B1

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