Guanidinosuccinic acid



Compound IDCDAMM00046
Common nameGuanidinosuccinic acid
IUPAC name(2S)-2-(diaminomethylideneamino)butanedioic acid
Molecular formulaC5H9N3O4

Experimental data

Retention time14.27
Adduct[M+H]+
Actual mz176.067
Theoretical mz176.067
Error2.95
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.4896

Identifiers and class information

Inchi keyVVHOUVWJCQOYGG-REOHCLBHSA-N
SmilesC(C(C(=O)O)N=C(N)N)C(=O)O
SuperclassOrganic acids and derivatives
ClassCarboxylic acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)1
Number of carboxylic acid groups (#acid)2
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)5
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)175.144
Computed dipole moment(dipole)11.559
Total solvent accessible surface area (SASA)365.831
Hydrophobic component of SASA (FOSA)48.918
Hydrophilic component of SASA (FISA)316.913
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)564.249
Number of hydrogen bond donors (donorHB)6
Number of hydrogen bond acceptors (accptHB)6
Free energy of solvation of dipole (dip^2/V)0.236779
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0401741
Globularity descriptor (glob)0.902676
Predicted polarizability in cubic angstroms (QPpolrz)13.217
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.999
Predicted octanol/gas partition coefficient (QPlogPoct)19.632
Predicted water/gas partition coefficient (QPlogPw)16.35
Predicted octanol/water partition coefficient (QPlogPo/w)-1.125
Predicted aqueous solubility (QPlogS)-0.8
Conformation-independent predicted aqueous solubility (CIQPlogS)-0.832
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)0.508
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)0.628
Predicted brain/blood partition coefficient (QPlogBB)-2.331
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)0.277
Predicted skin permeability, log Kp (QPlogKp)-8.943
PM3 calculated ionization potential (IP(ev))8.995
PM3 calculated electron affinity (EA(eV))-0.641
Number of likely metabolic reactions (#metab)4
Prediction of binding to human serum albumin (QPlogKhsa)-1.25
Predicted qualitative human oral absorption (HumanOralAbsorption)1
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)3.781
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)165.219
Number of nitrogen and oxygen atoms (#NandO)7
Number of violations of Lipinski’s rule of five (RuleOfFive)1
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
P15086CPB1Carboxypeptidase BT36725SEA
P15085CPA1Carboxypeptidase A1T33966SEA
Q9Y3Q0NAALAD2NAALADase IIT70036SEA
P15169CPN1Carboxypeptidase N, catalytic subunitT34471SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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