2-Oxoarginine



Compound IDCDAMM00044
Common name2-Oxoarginine
IUPAC name5-(diaminomethylideneamino)-2-oxopentanoic acid
Molecular formulaC6H11N3O3

Experimental data

Retention time7.08
Adduct[M+H]+
Actual mz174.087
Theoretical mz174.087
Error0.09
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.0315

Identifiers and class information

Inchi keyARBHXJXXVVHMET-UHFFFAOYSA-N
SmilesC(CC(=O)C(=O)O)CN=C(N)N
SuperclassOrganic acids and derivatives
ClassKeto acids and derivatives

Pharmacokinetic properties

Number of descriptor values(#stars)0
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)1
Number of carboxylic acid groups (#acid)1
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)6
Number of reactive functional groups (#rtvFG)2
Predicted central nervous system activity (CNS)-2
Molecular weight (mol_MW)173.171
Computed dipole moment(dipole)9.969
Total solvent accessible surface area (SASA)396.068
Hydrophobic component of SASA (FOSA)108.108
Hydrophilic component of SASA (FISA)287.96
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)613.663
Number of hydrogen bond donors (donorHB)5
Number of hydrogen bond acceptors (accptHB)6
Free energy of solvation of dipole (dip^2/V)0.161952
Index of cohesive interaction in solids (ACxDN^.5/SA)0.033874
Globularity descriptor (glob)0.881757
Predicted polarizability in cubic angstroms (QPpolrz)14.552
Predicted hexadecane/gas partition coefficient (QPlogPC16)6.916
Predicted octanol/gas partition coefficient (QPlogPoct)17.399
Predicted water/gas partition coefficient (QPlogPw)14.54
Predicted octanol/water partition coefficient (QPlogPo/w)-1.097
Predicted aqueous solubility (QPlogS)-0.982
Conformation-independent predicted aqueous solubility (CIQPlogS)-0.838
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-1.638
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)4.664
Predicted brain/blood partition coefficient (QPlogBB)-2.267
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)1.901
Predicted skin permeability, log Kp (QPlogKp)-8.313
PM3 calculated ionization potential (IP(ev))8.35
PM3 calculated electron affinity (EA(eV))0.287
Number of likely metabolic reactions (#metab)3
Prediction of binding to human serum albumin (QPlogKhsa)-1.076
Predicted qualitative human oral absorption (HumanOralAbsorption)2
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)32.489
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)145.551
Number of nitrogen and oxygen atoms (#NandO)6
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)1

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q04756HGFACHepatocyte growth factor activatorT38584SEA
Q9UJM8HAO1Hydroxyacid oxidase 1T63170SEA
P15169CPN1Carboxypeptidase N, catalytic subunitT34471SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T63170DI0201Inborn carbohydrate metabolism error[ICD-11: 5C51]Q9UJM8HAO1

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