Adenine



Compound IDCDAMM00019
Common nameAdenine
IUPAC name7H-purin-6-amine
Molecular formulaC5H5N5

Experimental data

Retention time6.57
Adduct[M+H]+
Actual mz136.061
Theoretical mz136.062
Error4.18
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score8.5363

Identifiers and class information

Inchi keyGFFGJBXGBJISGV-UHFFFAOYSA-N
SmilesC1=NC2=NC=NC(=C2N1)N
SuperclassOrganoheterocyclic compounds
ClassImidazopyrimidines

Pharmacokinetic properties

Number of descriptor values(#stars)2
Number of non-conjugated amine groups (#amine)0
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)1
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)-1
Molecular weight (mol_MW)135.128
Computed dipole moment(dipole)2.734
Total solvent accessible surface area (SASA)303.153
Hydrophobic component of SASA (FOSA)0
Hydrophilic component of SASA (FISA)170.481
Pie component of the SASA (PISA)132.672
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)451.892
Number of hydrogen bond donors (donorHB)3
Number of hydrogen bond acceptors (accptHB)4
Free energy of solvation of dipole (dip^2/V)0.016546
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0228538
Globularity descriptor (glob)0.93942
Predicted polarizability in cubic angstroms (QPpolrz)12.556
Predicted hexadecane/gas partition coefficient (QPlogPC16)5.366
Predicted octanol/gas partition coefficient (QPlogPoct)10.63
Predicted water/gas partition coefficient (QPlogPw)10.624
Predicted octanol/water partition coefficient (QPlogPo/w)-0.196
Predicted aqueous solubility (QPlogS)-1.952
Conformation-independent predicted aqueous solubility (CIQPlogS)-1.267
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-3.145
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)239.457
Predicted brain/blood partition coefficient (QPlogBB)-0.785
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)105.528
Predicted skin permeability, log Kp (QPlogKp)-4.098
PM3 calculated ionization potential (IP(ev))8.538
PM3 calculated electron affinity (EA(eV))0.286
Number of likely metabolic reactions (#metab)1
Prediction of binding to human serum albumin (QPlogKhsa)-0.746
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)68.38
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)79.8
Number of nitrogen and oxygen atoms (#NandO)5
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source
Q9Y2T3GDAGuanine deaminaseT92460SEA
Q13126MTAPS-methyl-5-thioadenosine phosphorylaseT40787SEA

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names
T40787DI0275Multiple sclerosis[ICD-11: 8A40]Q13126MTAP

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