Pyrrolidine



Compound IDCDAMM00001
Common namePyrrolidine
IUPAC namepyrrolidine
Molecular formulaC4H9N

Experimental data

Retention time7.25
Adduct[M+H]+
Actual mz72.0816
Theoretical mz72.0808
Error11.93
Ionizaton modePositive
Instrument typeLC-MS/MS-QTOF, spectrum predicted by MS-DIAL v4.9 integrated with MS-FINDER 3.60
Score7.1059

Identifiers and class information

Inchi keyRWRDLPDLKQPQOW-UHFFFAOYSA-N
SmilesC1CCNC1
SuperclassOrganoheterocyclic compounds
ClassPyrrolidines

Pharmacokinetic properties

Number of descriptor values(#stars)12
Number of non-conjugated amine groups (#amine)1
Number of amidine and guanidine groups (#amidine)0
Number of carboxylic acid groups (#acid)0
Number of non-conjugated amide groups (#amide)0
Number of rotatable bonds (#rotor)0
Number of reactive functional groups (#rtvFG)0
Predicted central nervous system activity (CNS)2
Molecular weight (mol_MW)71.122
Computed dipole moment(dipole)1.396
Total solvent accessible surface area (SASA)260.646
Hydrophobic component of SASA (FOSA)226.888
Hydrophilic component of SASA (FISA)33.758
Pie component of the SASA (PISA)0
Weakly polar component of the SASA (WPSA)0
Total solvent accesible volume (volume)369.589
Number of hydrogen bond donors (donorHB)1
Number of hydrogen bond acceptors (accptHB)1.5
Free energy of solvation of dipole (dip^2/V)0.0052704
Index of cohesive interaction in solids (ACxDN^.5/SA)0.0057549
Globularity descriptor (glob)0.955564
Predicted polarizability in cubic angstroms (QPpolrz)8.637
Predicted hexadecane/gas partition coefficient (QPlogPC16)2.256
Predicted octanol/gas partition coefficient (QPlogPoct)4.019
Predicted water/gas partition coefficient (QPlogPw)3.518
Predicted octanol/water partition coefficient (QPlogPo/w)0.458
Predicted aqueous solubility (QPlogS)0.838
Conformation-independent predicted aqueous solubility (CIQPlogS)0.809
Predicted IC50 value for blockage of HERG K+ channels (QPlogHERG)-2.977
Predicted apparent Caco-2 cell permeability in nm/sec (QPPCaco)1182.15
Predicted brain/blood partition coefficient (QPlogBB)0.716
Predicted apparent MDCK cell permeability in nm/sec (QPPMDCK)655.814
Predicted skin permeability, log Kp (QPlogKp)-4.204
PM3 calculated ionization potential (IP(ev))9.221
PM3 calculated electron affinity (EA(eV))-2.789
Number of likely metabolic reactions (#metab)0
Prediction of binding to human serum albumin (QPlogKhsa)-0.646
Predicted qualitative human oral absorption (HumanOralAbsorption)3
Predicted human oral absorption on 0 to 100% scale (PercentHumanOralAbsorption)84.62
Solvent-accessible surface area of fluorine atoms (SAFluorine)0
Solvent-accessible surface area of amide oxygen atoms (SAamideO)0
Van der Waals surface area (PSA)17.129
Number of nitrogen and oxygen atoms (#NandO)1
Number of violations of Lipinski’s rule of five (RuleOfFive)0
Number of violations of Jorgensen’s rule of three (RuleOfThree)0

Compound-target network

Cytoscape Graph

Protein targets associated with phytocompound

Uniprot ID Gene name Target name TTD_ID Prediction source

Target associated diseases

TTD_ID Disease_ID Disease name ICD_11 Uniprot ID Gene names

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