Riboflavin SNPs in CpG Data

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Gene Symbol	Chromosome	CpG Start	CpG End	Name	SNP Start	SNP End	rsID	Strand	ref NCBI	Observed	No of CpGs	CpG%	GC%	Observed/Expected Ratio	Function
ACADM	chr1	76189916	76190730	CpG: 66	76190036	76190037	rs114802787	+	C	C/G	66	16.2	61.1	0.87	near-gene-5
ACADM	chr1	76189916	76190730	CpG: 66	76190071	76190072	rs114005461	+	G	A/G	66	16.2	61.1	0.87	untranslated-5
ACADM	chr1	76189916	76190730	CpG: 66	76190110	76190111	rs1251076	-	T	A/G	66	16.2	61.1	0.87	untranslated-5
ACADM	chr1	76189916	76190730	CpG: 66	76190215	76190216	rs17848068	+	G	A/G	66	16.2	61.1	0.87	untranslated-5
ACADM	chr1	76189916	76190730	CpG: 66	76190330	76190331	rs61124994	+	C	C/G	66	16.2	61.1	0.87	untranslated-5
ACADM	chr1	76189916	76190730	CpG: 66	76190438	76190439	rs59932454	+	T	A/C/T	66	16.2	61.1	0.87	untranslated-5
ACADM	chr1	76189916	76190730	CpG: 66	76190567	76190568	rs116034618	+	C	C/T	66	16.2	61.1	0.87	intron
ACADM	chr1	76189916	76190730	CpG: 66	76190568	76190569	rs1251075	-	C	C/G	66	16.2	61.1	0.87	intron
ACADM	chr1	76189916	76190730	CpG: 66	76190689	76190690	rs1251074	-	C	G/T	66	16.2	61.1	0.87	intron
DHCR	chr1	55352463	55353328	CpG: 107	55352612	55352613	rs79857573	+	G	A/G	107	24.7	71.8	0.96	coding-synon
DHCR	chr1	55352463	55353328	CpG: 107	55352842	55352843	rs17552526	-	C	G/T	107	24.7	71.8	0.96	untranslated-5
KDM1A	chr1	23345814	23346677	CpG: 101	23346648	23346649	rs148150162	+	G	A/G	101	23.4	68.3	1.01	intron
MTHFR	chr1	11865462	11866566	CpG: 93	11865541	11865542	rs3753582	-	A	G/T	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11865663	11865664	rs45440899	-	T	A/G	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11865803	11865804	rs13306561	-	A	C/T	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11865816	11865817	rs45594036	-	C	G/T	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11865816	11865816	rs3834043	-	-	-/G	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11865824	11865824	rs45518935	-	-	-/G	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11866182	11866183	rs13306560	-	C	A/G	93	16.8	69.9	0.7	near-gene-5,ncRNA,untranslated-5
MTHFR	chr1	11865462	11866566	CpG: 93	11866441	11866442	rs111334345	+	G	A/G	93	16.8	69.9	0.7	intron,near-gene-5
MTHFR	chr1	11865462	11866566	CpG: 93	11866450	11866451	rs3737965	-	G	C/T	93	16.8	69.9	0.7	intron,near-gene-5
PPOX	chr1	161136001	161136686	CpG: 52	161136223	161136224	rs2301286	+	C	A/C	52	15.2	62.6	0.77	untranslated-5
PPOX	chr1	161136001	161136686	CpG: 52	161136342	161136343	rs72714915	+	C	C/G	52	15.2	62.6	0.77	untranslated-5
ACP2	chr11	47270234	47270633	CpG: 37	47270254	47270255	rs2167079	-	C	A/G	37	18.5	63.9	0.91	near-gene-5,missense,untranslated-5
FOXRED1	chr11	126138359	126139166	CpG: 78	126139099	126139100	rs1786702	+	T	C/T	78	19.3	65.7	0.93	near-gene-5,ncRNA,untranslated-5
NDUFV1	chr11	67374150	67374726	CpG: 61	67374409	67374410	rs73490568	+	G	A/G	61	21.2	70.5	0.86	untranslated-5
NDUFV1	chr11	67374150	67374726	CpG: 61	67374580	67374581	rs1871043	-	T	A/G	61	21.2	70.5	0.86	intron
NDUFV1	chr11	67374150	67374726	CpG: 61	67374700	67374701	rs11227853	+	G	A/G	61	21.2	70.5	0.86	intron
ACADS	chr12	121177115	121177341	CpG: 24	121177159	121177160	rs35233375	+	G	A/G	24	21.2	70.8	0.85	missense
ACADS	chr12	121177115	121177341	CpG: 24	121177255	121177256	rs2229533	+	G	A/G	24	21.2	70.8	0.85	untranslated-3
ACADS	chr12	121177115	121177341	CpG: 24	121177271	121177272	rs3916	+	G	C/G	24	21.2	70.8	0.85	untranslated-3
L2HGDH	chr14	50778680	50779544	CpG: 84	50778769	50778770	rs35710558	-	C	G/T	84	19.4	63.9	0.95	near-gene-5,missense
L2HGDH	chr14	50778680	50779544	CpG: 84	50778815	50778816	rs2275591	+	A	A/C	84	19.4	63.9	0.95	near-gene-5,missense
L2HGDH	chr14	50778680	50779544	CpG: 84	50779228	50779229	rs12892575	+	C	C/T	84	19.4	63.9	0.95	near-gene-5,ncRNA,untranslated-5
L2HGDH	chr14	50778680	50779544	CpG: 84	50779263	50779264	rs117249640	+	A	A/C	84	19.4	63.9	0.95	near-gene-5,ncRNA,untranslated-5
DUOX2	chr15	45403248	45404218	CpG: 101	45403511	45403512	rs200998617	+	C	A/C	101	20.8	72.7	0.79	intron
DUOX2	chr15	45403248	45404218	CpG: 101	45403916	45403917	rs181503132	+	C	C/T	101	20.8	72.7	0.79	intron
DUOX2	chr15	45403248	45404218	CpG: 101	45403966	45403967	rs199957468	+	A	A/G	101	20.8	72.7	0.79	missense
DUOX2	chr15	45403248	45404218	CpG: 101	45403977	45403978	rs76681174	+	G	A/G	101	20.8	72.7	0.79	coding-synon
DUOX2	chr15	45403248	45404218	CpG: 101	45404065	45404066	rs2001616	+	G	A/G	101	20.8	72.7	0.79	missense
DUOX2	chr15	45404769	45405482	CpG: 58	45404773	45404774	rs117041393	+	G	G/T	58	16.3	66.8	0.74	coding-synon,near-gene-5
DUOX2	chr15	45404769	45405482	CpG: 58	45404996	45404997	rs113700172	+	C	C/T	58	16.3	66.8	0.74	intron,near-gene-5
DUOX2	chr15	45404769	45405482	CpG: 58	45405145	45405146	rs74367551	+	G	G/T	58	16.3	66.8	0.74	intron,near-gene-5
DUOX2	chr15	45404769	45405482	CpG: 58	45405322	45405323	rs77078382	+	C	A/C	58	16.3	66.8	0.74	intron,near-gene-5
DUOX2	chr15	45404769	45405482	CpG: 58	45405413	45405414	rs75354193	+	C	C/T	58	16.3	66.8	0.74	intron,near-gene-5
DUOX2	chr15	45404769	45405482	CpG: 58	45405462	45405463	rs269856	+	G	G/T	58	16.3	66.8	0.74	intron,near-gene-5
ETFA	chr15	76603563	76604026	CpG: 51	76603610	76603611	rs3215142	+	A	-/A	51	22	69.3	0.92	intron
ETFA	chr15	76603563	76604026	CpG: 51	76603678	76603679	rs62027051	+	G	C/G	51	22	69.3	0.92	intron
IVD	chr15	40697781	40698368	CpG: 48	40698115	40698116	rs73383128	+	C	C/T	48	16.4	68.7	0.7	missense
IVD	chr15	40697781	40698368	CpG: 48	40698227	40698228	rs111440850	+	A	A/G	48	16.4	68.7	0.7	intron

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