Riboflavin SNPS Near Gene 5


Gene SymbolChromosomeStartEndrs IDStrandNCBI refObservedClassFunctionSubmitter CountSubmitterFrequency CountAllele Frequency
ETFDHchr4159594749159594750rs114653187+GG/Tsingleintron,near-gene-521000GENOMES,TISHKOFF,20.980401
ETFDHchr4159594816159594817rs75829254+TC/Tsingleintron,near-gene-521000GENOMES,TISHKOFF,20.017857
ETFDHchr4159594890159594891rs116032941+GA/Gsingleintron,near-gene-521000GENOMES,ILLUMINA,20.010009
ETFDHchr4159595060159595061rs78051411+TC/Tsingleintron,near-gene-521000GENOMES,TISHKOFF,20.017857
ETFDHchr4159595091159595092rs191392725+CA/Csingleintron,near-gene-511000GENOMES,20.015611
ETFDHchr4159595092159595093rs182838657+AA/Gsingleintron,near-gene-511000GENOMES,20.984389
ETFDHchr4159595116159595117rs78439212+GA/Gsingleintron,near-gene-521000GENOMES,TISHKOFF,20.017422
ETFDHchr4159595228159595229rs76433339+GA/Gsingleintron,near-gene-521000GENOMES,TISHKOFF,20.018293
MTRRchr578519227851923rs7714950+CC/Tsinglenear-gene-5121000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,WI_SSAHASNP,20.670475
MTRRchr578521667852167rs162023+AA/Gsinglenear-gene-5221000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,20.512069
MTRRchr578522817852282rs326205+GA/Gsinglenear-gene-5231000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,20.563031
MTRRchr578524067852407rs79931532+GG/Tsinglenear-gene-551000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,ILLUMINA,SSMP,20.975688
MTRRchr578525297852530rs79562536+TG/Tsinglenear-gene-511000GENOMES,20.010453
MTRRchr578528117852812rs75874701+TA/Tsinglenear-gene-531000GENOMES,GMI,SSMP,20.033085
MTRRchr578529777852978rs12653983+CA/Csinglenear-gene-5121000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,20.305403
MTRRchr578530417853042rs74647306+GA/Gsinglenear-gene-531000GENOMES,GMI,SSMP,20.032672
MTRRchr578531817853182rs112112268+CC/Gsinglenear-gene-531000GENOMES,BUSHMAN,TISHKOFF,20.981193
MTRRchr578532957853296rs75171450+CC/Tsinglenear-gene-511000GENOMES,20.977807
MTRRchr578533037853304rs326206+CA/Csinglenear-gene-5111000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,20.082493
MTRRchr578680297868030rs2966952+TC/Tsingleintron,near-gene-5,missense271000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE,20.834742
MTRRchr578682687868269rs3733781-AC/Tsingleintron,near-gene-5,untranslated-581000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,YUSUKE,20.123683
MTRRchr578685427868543rs326118+TG/Tsingleintron,near-gene-5181000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PHARMGKB_PPII,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,20.232664
MTRRchr578688657868866rs3822445-GC/Gsingleintron,near-gene-591000GENOMES,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA-UK,PHARMGKB_PPII,SSMP,TISHKOFF,YUSUKE,20.859432
MTRRchr578692347869235rs72716536+TC/Tsinglenear-gene-5,untranslated-591000GENOMES,BL,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SSMP,TISHKOFF,20.170937
MTRRchr578693837869386rs150132234+CTC-/CTCdeletionintron,near-gene-531000GENOMES,LUNTER,WARNICH_LAB,20.035813
MTRRchr578693857869388rs141755990+CCT-/CCT/CCTCTin-delintron,near-gene-52PHARMGKB_PPII,TISHKOFF,20.038328
MTRRchr578694557869456rs34828626+C-/Cdeletionintron,near-gene-571000GENOMES,ABI,HUMANGENOME_JCVI,LUNTER,PHARMGKB_PPII,PJP,SSMP,20.214482
MTRRchr578695777869578rs75888760+CC/Tsingleintron,near-gene-561000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF,20.857339
MTRRchr578695907869591rs138374466+CC/Tsingleintron,near-gene-511000GENOMES,20.988981
MTRRchr578697027869703rs75772655+GA/Gsingleintron,near-gene-541000GENOMES,BUSHMAN,SSMP,TISHKOFF,20.137156
MTRRchr578698837869884rs79227708+GA/Gsingleintron,near-gene-551000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF,20.083486
MTRRchr578698997869900rs73737651+GC/Gsingleintron,near-gene-561000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SSMP,TISHKOFF,20.094867
MTRRchr578700827870083rs326119+CA/Csingleintron,near-gene-5201000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,KYUGEN,PHARMGKB_PPII,PJP,SC_JCM,SSMP,TISHKOFF,20.601280
MTRRchr578700947870095rs12653464+GA/Gsingleintron,near-gene-5111000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,KYUGEN,PHARMGKB_PPII,SSMP,TISHKOFF,20.247938
MTRRchr578709727870973rs1801394+AA/Gsinglenear-gene-5,missense291000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA,KYUGEN,NHLBI-ESP,OMICIA,OMIM-CURATED-RECORDS,PHARMGKB_PPII,PJP,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE,20.572342
SDHAchr5218381218381rs3214561---/Ginsertionnear-gene-5,untranslated-541000GENOMES,LUNTER,SSMP,YUSUKE,20.787879
SDHAchr5218387218387rs35805262+--/Cinsertionnear-gene-5,untranslated-52HGSV,LARRIBA,20.882023
SDHAchr5218597218598rs2303740-GC/Tsingleintron,near-gene-5101000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,YUSUKE,20.649588
SDHAchr5218809218810rs1864090-CA/Gsingleintron,near-gene-52SSMP,TSC-CSHL,20.020667
SDHAchr5219021219022rs10054902+GA/Gsingleintron,near-gene-551000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP,WI_SSAHASNP,20.298624
SDHAchr5219137219138rs10061004+CC/Gsingleintron,near-gene-5101000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,ENSEMBL,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,20.782967
SDHAchr5219327219328rs10067482+TG/Tsingleintron,near-gene-5111000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,20.217749
SDHAchr5219396219396rs58226981+--/TTinsertionintron,near-gene-571000GENOMES,BCMHGSC_JDW,BUSHMAN,HGSV,LUNTER,SSMP,TISHKOFF,20.783945
SDHAchr5219505219509rs146146961+ACCC-/ACCCdeletionintron,near-gene-541000GENOMES,GMI,LUNTER,SSMP,20.044077
SDHAchr5219548219549rs6859848+AA/Gsingleintron,near-gene-5121000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP,20.722527
SDHAchr5219560219561rs6859853+AA/Gsingleintron,near-gene-541000GENOMES,BCM_SSAHASNP,HGSV,TISHKOFF,20.913303
SDHAchr5219906219907rs138004841+CC/Tsingleintron,near-gene-521000GENOMES,SSMP,20.988981
SDHAchr5220002220002rs56026450+--/Tinsertionintron,near-gene-571000GENOMES,BUSHMAN,HGSV,LUNTER,PJP,SSMP,TISHKOFF,20.783945
SDHAchr5220229220231rs201995405+AG-/AGdeletionintron,near-gene-521000GENOMES,LUNTER,20.016529
ENPP3chr6132022991132022992rs112641550+AA/Csingleintron,near-gene-521000GENOMES,COMPLETE_GENOMICS,20.949541
ENPP3chr6132023033132023034rs150578170+AA/Gsingleintron,near-gene-521000GENOMES,GMI,20.828283
ENPP3chr6132023129132023131rs201952293+AT-/ATdeletionintron,near-gene-531000GENOMES,LUNTER,SSMP,20.042700
ENPP3chr6132023165132023166rs200398525+A-/Adeletionintron,near-gene-531000GENOMES,BILGI_BIOE,LUNTER,20.058770
ENPP3chr6132023625132023627rs140349321+TT-/TTdeletionintron,near-gene-521000GENOMES,LUNTER,20.068411
ENPP3chr6132033371132033372rs143146055+GA/Gsingleintron,near-gene-521000GENOMES,GMI,20.166208
ENPP3chr6132033682132033683rs17090727+AA/Gsingleintron,near-gene-521000GENOMES,PERLEGEN,20.960708
ENPP3chr6132033691132033692rs17090723+TC/Tsingleintron,near-gene-51PERLEGEN,20.335714
PORchr77554278675542787rs7799657+CC/Tsinglenear-gene-531000GENOMES,HGSV,WI_SSAHASNP,20.988084
PORchr77554294775542948rs149371800+AA/Gsinglenear-gene-511000GENOMES,20.984848
PORchr77554421175544212rs12537282+CC/G/Tsinglenear-gene-571000GENOMES,ABI,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,PHARMGKB_PMT,TISHKOFF,20.952681
PORchr77554424675544247rs72553971+CA/Csinglenear-gene-531000GENOMES,ILLUMINA,PHARMGKB_PMT,20.026216
PORchr77554426775544268rs72553972+CA/Csinglenear-gene-541000GENOMES,ILLUMINA,PHARMGKB_PMT,SSMP,20.089459
PORchr77554445475544455rs3823884-AG/Tsinglenear-gene-5,untranslated-5161000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA,PERLEGEN,PHARMGKB_PMT,PJP,SSMP,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE,20.430056
PORchr77557130575571306rs58648820+GA/Gsingleintron,near-gene-541000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF,20.072477
PORchr77557133575571336rs112274825+AA/Csingleintron,near-gene-521000GENOMES,COMPLETE_GENOMICS,20.980275
PORchr77557255775572558rs139772877+CC/Tsingleintron,near-gene-521000GENOMES,TISHKOFF,20.983471
PORchr77557292375572924rs73702701+AA/Csingleintron,near-gene-541000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF,20.978440
SUGCTchr74017467240174673rs7793074+CA/Csinglecoding-synon,near-gene-541000GENOMES,ILLUMINA,NHLBI-ESP,WI_SSAHASNP,20.035714
SUGCTchr74017524340175244rs142237061+TC/Tsingleintron,near-gene-521000GENOMES,ILLUMINA,20.013774
SUGCTchr74017596340175964rs115025708+GA/Gsingleintron,near-gene-521000GENOMES,TISHKOFF,20.017422
SUGCTchr74017598340175984rs186511123+TA/Tsingleintron,near-gene-511000GENOMES,20.010101
SLC25A32chr8104425303104425304rs3098241-AC/Tsingleintron,near-gene-5181000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,20.216899
SLC25A32chr8104425608104425609rs3134291+CC/Tsingleintron,near-gene-5181000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,20.547898
SLC25A32chr8104425879104425880rs115361595+AA/Gsingleintron,near-gene-521000GENOMES,TISHKOFF,20.987369
SLC25A32chr8104426044104426045rs3134292+CA/Csingleintron,near-gene-5181000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,20.258745
SLC25A32chr8104426083104426084rs3134293+CC/Tsingleintron,near-gene-5131000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,20.793236
SLC25A32chr8104426244104426245rs3133817+AA/Gsingleintron,near-gene-5181000GENOMES,ABI,AFFY,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,YUSUKE,20.736441
SLC25A32chr8104426530104426531rs28630640+CC/Tsingleintron,near-gene-5101000GENOMES,ABI,BL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,20.943681
SLC25A32chr8104426791104426792rs73699799+CC/Tsingleintron,near-gene-521000GENOMES,ILLUMINA-UK,20.987615
SLC25A32chr8104426797104426798rs3134294+AA/Csingleintron,near-gene-521000GENOMES,SC_JCM,20.966057
SLC25A32chr8104426909104426910rs5893654+T-/Tdeletionintron,near-gene-531000GENOMES,ABI,DEVINE_LAB,20.443119
SLC52A2chr8145582247145582248rs144713518+GA/Gsinglenear-gene-5,ncRNA,untranslated-511000GENOMES,20.012397
SLC52A2chr8145582293145582294rs115940535+CA/Csingleintron,near-gene-5,ncRNA,untranslated-511000GENOMES,20.030923
SLC52A2chr8145582739145582740rs114304511+AA/Gsingleintron,near-gene-521000GENOMES,TISHKOFF,20.982578
SLC52A2chr8145582808145582809rs115365198+CC/Gsingleintron,near-gene-521000GENOMES,TISHKOFF,20.985927
SLC52A2chr8145582838145582839rs3817681+TC/Tsingleintron,near-gene-5151000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,YUSUKE,20.417187
SLC52A2chr8145578811145578812rs4515595-GC/Tsinglenear-gene-3,near-gene-5121000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SSMP,TISHKOFF,20.710430
SLC52A2chr8145579703145579704rs61747069+TC/Tsinglenear-gene-5,missense2CORNELL,NHLBI-ESP,20.016667
SLC52A2chr8145579791145579792rs2272665+CA/Csinglenear-gene-5,missense3ILLUMINA,KRIBB_YJKIM,YUSUKE,20.017913
SLC52A2chr8145579930145579931rs200026961+CC/Gsingleintron,near-gene-52BILGI_BIOE,CLINSEQ_SNP,20.820500
SLC52A2chr8145579931145579932rs200985955+CC/Tsingleintron,near-gene-52BILGI_BIOE,CLINSEQ_SNP,20.834500
SLC52A2chr8145579935145579936rs112211890+CC/Tsingleintron,near-gene-53CLINSEQ_SNP,COMPLETE_GENOMICS,TISHKOFF,20.773085
SLC52A2chr8145579952145579953rs4993862-TA/G/Tsingleintron,near-gene-52CLINSEQ_SNP,DEVINE_LAB,30.617117
SLC52A2chr8145579961145579962rs77494279+CC/Tsinglenear-gene-5,missense3CLINSEQ_SNP,ENSEMBL,EXOME_CHIP,20.932166
SLC52A2chr8145579963145579964rs75159950+AA/Gsinglecoding-synon,near-gene-54CLINSEQ_SNP,ENSEMBL,EXOME_CHIP,ILLUMINA,20.927680
SLC52A2chr8145579966145579967rs77157066+TC/Tsinglecoding-synon,near-gene-52CLINSEQ_SNP,ENSEMBL,20.073788
SLC52A2chr8145580534145580535rs61746974+CC/Gsinglenear-gene-5,missense91000GENOMES,CLINSEQ_SNP,CORNELL,EXOME_CHIP,GOLDSTEINLAB,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF,20.935919
SLC52A2chr8145580983145580984rs2272666+AA/Gsingleintron,near-gene-5211000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE,20.387120
SLC52A2chr8145581004145581005rs115001185+GG/Tsingleintron,near-gene-521000GENOMES,TISHKOFF,20.981707
SLC52A2chr8145581023145581024rs116687799+CC/Tsingleintron,near-gene-511000GENOMES,20.981707
SLC52A2chr8145581556145581557rs2280840+GA/Gsingleintron,near-gene-5171000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE,20.480154
SLC52A2chr8145581949145581950rs200282665+CC/Gsinglenear-gene-5,missense21000GENOMES,NHLBI-ESP,20.985308
SLC52A2chr8145582121145582122rs183286864+CC/Tsinglenear-gene-5,untranslated-531000GENOMES,NHLBI-ESP,WARNICH_LAB,20.978421
AIFM1chrX129272440129272441rs12010190+AA/Gsingleintron,near-gene-541000GENOMES,ABI,CSHL-HAPMAP,TISHKOFF,20.980048
AIFM1chrX129272448129272449rs182805215+TA/Tsingleintron,near-gene-521000GENOMES,TISHKOFF,20.029021
AIFM1chrX129272448129272449rs200686111+T-/Tdeletionintron,near-gene-511000GENOMES,20.024184
AIFM1chrX129272519129272520rs12014323+CC/Tsingleintron,near-gene-591000GENOMES,ABI,AFFY,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,TISHKOFF,20.968689
AIFM1chrX129272616129272617rs12014115+GA/Gsinglecoding-synon,intron,near-gene-591000GENOMES,ABI,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,ILLUMINA,NHLBI-ESP,SSAHASNP,TISHKOFF,20.033072
AIFM1chrX129273247129273248rs209999+AA/Gsingleintron,near-gene-5141000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,20.553679