Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
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FDXR | chr17 | 72866716 | 72866716 | rs112059939 | + | - | -/A | insertion | intron,near-gene-5 | 4 | 1000GENOMES,BILGI_BIOE,BUSHMAN,SSMP, | 2 | 0.795413 |
FDXR | chr17 | 72866725 | 72866726 | rs72844509 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,BGI,GMI, | 2 | 0.794458 |
FDXR | chr17 | 72866759 | 72866760 | rs499995 | - | A | C/T | single | intron,near-gene-5 | 9 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,SC_JCM,SSMP,TISHKOFF, | 2 | 0.447802 |
PNPO | chr17 | 46019321 | 46019322 | rs147883701 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.986226 |
PNPO | chr17 | 46019600 | 46019601 | rs16949651 | + | A | A/G | single | intron,near-gene-5 | 12 | 1000GENOMES,AFFY,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 3 | 0.801962 |
PNPO | chr17 | 46019900 | 46019901 | rs11079803 | + | G | A/G | single | intron,near-gene-5 | 17 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.599664 |
PNPO | chr17 | 46020361 | 46020362 | rs77084317 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.028310 |
PNPO | chr17 | 46020697 | 46020698 | rs11079804 | + | C | C/T | single | coding-synon,near-gene-5 | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PJP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.854557 |
SLC52A1 | chr17 | 4938923 | 4938924 | rs410520 | + | C | C/T | single | near-gene-5 | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SSMP,TISHKOFF, | 2 | 0.573321 |
SLC52A1 | chr17 | 4938929 | 4938930 | rs189295466 | + | C | C/T | single | near-gene-5 | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.989440 |
SLC52A1 | chr17 | 4939049 | 4939050 | rs58869653 | + | C | -/C | deletion | near-gene-5 | 10 | 1000GENOMES,BILGI_BIOE,BL,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.988532 |
SLC52A1 | chr17 | 4939083 | 4939084 | rs9905696 | + | A | A/G | single | near-gene-5 | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.425240 |
SLC52A1 | chr17 | 4939389 | 4939390 | rs141180763 | + | G | A/G | single | near-gene-5 | 1 | 1000GENOMES, | 2 | 0.027548 |
SLC52A1 | chr17 | 4939471 | 4939472 | rs112738163 | + | G | A/G | single | near-gene-5 | 5 | 1000GENOMES,BL,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.072018 |
SLC52A1 | chr17 | 4939652 | 4939653 | rs4790728 | + | A | A/G | single | near-gene-5 | 3 | 1000GENOMES,SSMP,WI_SSAHASNP, | 2 | 0.988062 |
SLC52A1 | chr17 | 4939728 | 4939729 | rs4790242 | + | C | C/T | single | near-gene-5 | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.914141 |
SLC52A1 | chr17 | 4939854 | 4939855 | rs1968492 | - | T | A/G | single | near-gene-5 | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.081353 |
SLC52A1 | chr17 | 4939926 | 4939927 | rs150094593 | + | G | A/G | single | near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010560 |
SLC52A1 | chr17 | 4939986 | 4939987 | rs3885779 | - | G | C/T | single | near-gene-5 | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.648427 |
SLC52A1 | chr17 | 4940260 | 4940261 | rs118100930 | + | A | A/G | single | near-gene-5 | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.960836 |
SLC52A1 | chr17 | 4940495 | 4940496 | rs72822614 | + | G | A/G | single | near-gene-5 | 6 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.073394 |
ACP5 | chr19 | 11688888 | 11688889 | rs76639504 | + | A | A/T | single | intron,near-gene-5 | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.919930 |
ACP5 | chr19 | 11688959 | 11688960 | rs17001464 | - | C | -/G | deletion | intron,near-gene-5 | 5 | 1000GENOMES,KYUGEN,LUNTER,SSMP,TISHKOFF, | 2 | 0.029519 |
ACP5 | chr19 | 11689131 | 11689132 | rs139927262 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986685 |
ACP5 | chr19 | 11689157 | 11689158 | rs3760780 | - | T | A/G | single | intron,near-gene-5 | 16 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,YUSUKE, | 2 | 0.494603 |
ETFB | chr19 | 51858538 | 51858539 | rs10419235 | + | T | C/T | single | intron,near-gene-5 | 4 | 1000GENOMES,BCM_SSAHASNP,HGSV,TISHKOFF, | 2 | 0.026581 |
ETFB | chr19 | 51858799 | 51858800 | rs139724399 | + | G | G/T | single | intron,near-gene-5 | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.921947 |
ETFB | chr19 | 51859050 | 51859051 | rs80143357 | + | A | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,ENSEMBL,GMI,SSMP, | 2 | 0.709633 |
ETFB | chr19 | 51859110 | 51859111 | rs11880444 | + | A | A/C | single | intron,near-gene-5 | 9 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.508242 |
ETFB | chr19 | 51859130 | 51859131 | rs55996055 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,HGSV, | 2 | 0.064279 |
ETFB | chr19 | 51859194 | 51859195 | rs192498801 | + | G | A/G | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.020661 |
ETFB | chr19 | 51859209 | 51859210 | rs184632388 | + | G | C/G | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.012397 |
ETFB | chr19 | 51859286 | 51859287 | rs11880489 | + | A | A/G | single | intron,near-gene-5 | 11 | 1000GENOMES,BL,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.279963 |
ETFB | chr19 | 51859370 | 51859371 | rs201352066 | + | T | -/T | deletion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.143251 |
ETFB | chr19 | 51859374 | 51859375 | rs34601865 | + | T | A/T | single | intron,near-gene-5 | 5 | 1000GENOMES,ABI,BUSHMAN,HGSV,PJP, | 2 | 0.072477 |
ETFB | chr19 | 51859375 | 51859376 | rs61433337 | + | T | A/T | single | intron,near-gene-5 | 6 | 1000GENOMES,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP, | 2 | 0.429487 |
ETFB | chr19 | 51859376 | 51859377 | rs114693949 | + | A | A/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.961672 |
ETFB | chr19 | 51859665 | 51859666 | rs117488111 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,SSMP, | 2 | 0.986945 |
ETFB | chr19 | 51859846 | 51859847 | rs11881186 | + | C | C/T | single | intron,near-gene-5 | 11 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.917083 |
ETFB | chr19 | 51859977 | 51859978 | rs57439176 | + | A | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,PJP, | 2 | 0.971560 |
ETFB | chr19 | 51860057 | 51860058 | rs116029153 | + | C | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014808 |
ACP1 | chr2 | 264878 | 264879 | rs111341344 | + | C | A/C | single | near-gene-5,ncRNA,untranslated-5 | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.018349 |
ACP1 | chr2 | 264984 | 264985 | rs11691572 | + | G | G/T | single | near-gene-5,ncRNA,missense | 9 | 1000GENOMES,ABI,AFFY,BUSHMAN,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,ILLUMINA,NHLBI-ESP, | 2 | 0.989735 |
ACP1 | chr2 | 265014 | 265015 | rs116051772 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,NHLBI-ESP,TISHKOFF, | 2 | 0.010453 |
ACP1 | chr2 | 265016 | 265017 | rs143584646 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,NHLBI-ESP,SSMP, | 2 | 0.988062 |
ACP1 | chr2 | 265103 | 265104 | rs7588515 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.022844 |
ACP1 | chr2 | 265574 | 265575 | rs114707038 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987805 |
ACP1 | chr2 | 265591 | 265592 | rs28364676 | - | T | -/A | deletion | intron,near-gene-5 | 9 | 1000GENOMES,BGI,GMI,HUMANGENOME_JCVI,KYUGEN,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.364220 |
ACP1 | chr2 | 265969 | 265970 | rs4447635 | + | C | C/G | single | intron,near-gene-5 | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.644639 |
AGPS | chr2 | 178257390 | 178257391 | rs113671272 | + | G | A/G | single | near-gene-5,ncRNA | 5 | 1000GENOMES,BCM-HGSC-SUB,GMI,SSMP,TISHKOFF, | 2 | 0.152605 |
AGPS | chr2 | 178257663 | 178257664 | rs34442536 | - | C | A/G | single | coding-synon,near-gene-5 | 5 | 1000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,SEATTLESEQ, | 2 | 0.029676 |
AGPS | chr2 | 178257723 | 178257724 | rs34744592 | - | A | C/T | single | coding-synon,near-gene-5 | 7 | 1000GENOMES,APPLERA_GI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP, | 2 | 0.027019 |
AGPS | chr2 | 178257838 | 178257839 | rs114901772 | + | A | A/C | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.973432 |
AGPS | chr2 | 178258100 | 178258101 | rs75637652 | + | T | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,SSMP, | 2 | 0.042683 |
AGPS | chr2 | 178258179 | 178258180 | rs112489893 | + | C | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.010550 |
AGPS | chr2 | 178258447 | 178258448 | rs4893940 | + | T | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.894334 |
AGPS | chr2 | 178258474 | 178258477 | rs201490845 | + | TCT | -/TCT | deletion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.037649 |
AGPS | chr2 | 178258728 | 178258729 | rs73025657 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.984404 |
AGPS | chr2 | 178258789 | 178258789 | rs149517661 | + | - | -/A | insertion | intron,near-gene-5 | 2 | 1000GENOMES,LUNTER, | 2 | 0.986226 |
AGPS | chr2 | 178258927 | 178258928 | rs113743394 | + | G | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.025229 |
AGPS | chr2 | 178259229 | 178259230 | rs58355594 | + | G | -/G | deletion | intron,near-gene-5 | 8 | 1000GENOMES,DEVINE_LAB,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.146924 |
AGPS | chr2 | 178259398 | 178259399 | rs57867889 | + | C | C/T | single | intron,near-gene-5 | 4 | 1000GENOMES,HGSV,SSMP,TISHKOFF, | 2 | 0.985308 |
AGPS | chr2 | 178259404 | 178259405 | rs77761187 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983014 |
CYB5R3 | chr22 | 43036754 | 43036755 | rs34942722 | + | T | -/T | deletion | intron,near-gene-5 | 10 | 1000GENOMES,ABI,BILGI_BIOE,BL,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.364220 |
CYB5R3 | chr22 | 43036778 | 43036779 | rs7284660 | + | G | A/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.262941 |
CYB5R3 | chr22 | 43037083 | 43037084 | rs6002841 | + | A | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,SC_SNP,TISHKOFF, | 2 | 0.983501 |
CYB5R3 | chr22 | 43037320 | 43037321 | rs200924967 | + | T | -/T | deletion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.015611 |
CYB5R3 | chr22 | 43037397 | 43037398 | rs12160248 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.983885 |
CYB5R3 | chr22 | 43037966 | 43037967 | rs9620076 | + | C | C/G | single | intron,near-gene-5 | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.984756 |
CYB5R3 | chr22 | 43038152 | 43038154 | rs34434782 | + | TA | -/TA | deletion | intron,near-gene-5 | 5 | 1000GENOMES,ABI,GMI,LUNTER,SSMP, | 2 | 0.240588 |
CYB5R3 | chr22 | 43038407 | 43038408 | rs5758830 | + | T | C/T | single | intron,near-gene-5 | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.680219 |
CYB5R3 | chr22 | 43040746 | 43040747 | rs78356298 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984756 |
CYB5R3 | chr22 | 43040784 | 43040785 | rs8190405 | - | G | -/C | deletion | intron,near-gene-5 | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,LUNTER,TISHKOFF, | 2 | 0.012299 |
CYB5R3 | chr22 | 43040792 | 43040793 | rs763063 | + | G | A/G | single | intron,near-gene-5 | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.677215 |
CYB5R3 | chr22 | 43040806 | 43040807 | rs8190404 | - | C | A/G | single | intron,near-gene-5 | 14 | 1000GENOMES,ABI,AFFY,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.097412 |
CYB5R3 | chr22 | 43040809 | 43040810 | rs8190403 | - | C | A/G | single | intron,near-gene-5 | 6 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,TISHKOFF, | 2 | 0.012916 |
CYB5R3 | chr22 | 43040838 | 43040839 | rs5751319 | + | C | C/T | single | intron,near-gene-5 | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.311800 |
CYB5R3 | chr22 | 43040872 | 43040873 | rs2284088 | + | G | A/G | single | intron,near-gene-5 | 11 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,YUSUKE, | 2 | 0.265899 |
CYB5R3 | chr22 | 43040920 | 43040921 | rs1109585 | + | C | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.590429 |
CYB5R3 | chr22 | 43041170 | 43041171 | rs6002848 | + | T | C/T | single | intron,near-gene-5 | 14 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.360593 |
CYB5R3 | chr22 | 43041254 | 43041255 | rs8190402 | - | T | A/T | single | intron,near-gene-5 | 9 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.760426 |
CYB5R3 | chr22 | 43041390 | 43041391 | rs916321 | + | G | A/G | single | intron,near-gene-5 | 13 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.289304 |
CYB5R3 | chr22 | 43041453 | 43041454 | rs8190399 | - | G | C/T | single | intron,near-gene-5 | 3 | EGP_SNPS,ILLUMINA,KRIBB_YJKIM, | 2 | 0.987302 |
CYB5R3 | chr22 | 43041459 | 43041460 | rs6002849 | + | C | A/C | single | intron,near-gene-5 | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,SC_SNP,TISHKOFF, | 2 | 0.013652 |
CYB5R3 | chr22 | 43041488 | 43041489 | rs2413707 | + | G | A/G | single | intron,near-gene-5 | 12 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.301195 |
CYB5R3 | chr22 | 43041544 | 43041545 | rs6002850 | + | A | A/G | single | intron,near-gene-5 | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.631628 |
CYB5R3 | chr22 | 43041592 | 43041593 | rs2413708 | + | A | A/G | single | intron,near-gene-5 | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.314252 |
CYB5R3 | chr22 | 43041635 | 43041636 | rs8190397 | - | C | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.025128 |
CYB5R3 | chr22 | 43041836 | 43041837 | rs6002851 | + | A | A/C | single | intron,near-gene-5 | 11 | 1000GENOMES,ABI,COMPLETE_GENOMICS,EGP_SNPS,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.899597 |
CYB5R3 | chr22 | 43041879 | 43041879 | rs8190395 | - | - | -/GCCACCT | insertion | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,LUNTER, | 2 | 0.772222 |
CYB5R3 | chr22 | 43041896 | 43041897 | rs6002852 | + | T | A/T | single | intron,near-gene-5 | 12 | 1000GENOMES,ABI,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.349831 |
CYB5R3 | chr22 | 43041901 | 43041902 | rs6002853 | + | C | C/T | single | intron,near-gene-5 | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.649894 |
CYB5R3 | chr22 | 43041928 | 43041929 | rs8190393 | - | G | C/T | single | intron,near-gene-5 | 15 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.644520 |
CYB5R3 | chr22 | 43042129 | 43042130 | rs6002854 | + | C | A/C | single | intron,near-gene-5 | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,SC_SNP,TISHKOFF, | 2 | 0.024487 |
CYB5R3 | chr22 | 43042196 | 43042197 | rs8190391 | - | C | C/G | single | intron,near-gene-5 | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.680982 |
CYB5R3 | chr22 | 43042203 | 43042204 | rs73888346 | + | T | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.011927 |
CYB5R3 | chr22 | 43042229 | 43042230 | rs8190390 | - | C | G/T | single | intron,near-gene-5 | 1 | EGP_SNPS, | 2 | 0.988764 |
CYB5R3 | chr22 | 43042617 | 43042618 | rs8190388 | - | T | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,TISHKOFF, | 2 | 0.987212 |
CYB5R3 | chr22 | 43043086 | 43043087 | rs2284090 | + | G | A/G | single | intron,near-gene-5 | 10 | 1000GENOMES,BL,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,YUSUKE, | 2 | 0.312040 |
CYB5R3 | chr22 | 43043169 | 43043170 | rs5996204 | + | T | G/T | single | intron,near-gene-5 | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,SC_SNP,TISHKOFF, | 2 | 0.013781 |
CYB5R3 | chr22 | 43043174 | 43043175 | rs2267458 | + | G | C/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.259785 |
CYB5R3 | chr22 | 43043237 | 43043238 | rs8190385 | - | G | A/C | single | intron,near-gene-5 | 10 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,EGP_SNPS,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.259897 |
CYB5R3 | chr22 | 43043502 | 43043503 | rs6002855 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.986226 |
CYB5R3 | chr22 | 43043579 | 43043579 | rs376525577 | - | - | lengthTooLong | in-del | intron,near-gene-5 | 2 | BILGI_BIOE,EGP_SNPS, | 2 | 0.333333 |
CYB5R3 | chr22 | 43043876 | 43043877 | rs8190379 | - | A | -/CTTTTTT | in-del | intron,near-gene-5 | 2 | DEVINE_LAB,EGP_SNPS, | 2 | 0.020000 |
CYB5R3 | chr22 | 43043953 | 43043954 | rs2267459 | + | T | A/T | single | intron,near-gene-5 | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.353267 |
CYB5R3 | chr22 | 43044148 | 43044149 | rs8190377 | - | T | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,SSMP, | 2 | 0.977350 |
CYB5R3 | chr22 | 43044207 | 43044208 | rs137142 | + | A | A/T | single | intron,near-gene-5 | 19 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.048490 |
CYB5R3 | chr22 | 43044207 | 43044233 | rs372457110 | - | ATCCCCAAGGAGGAG | -/GGACCTGGAGTCT | in-del | intron,near-gene-5 | 1 | EGP_SNPS, | 2 | 0.075000 |
CYB5R3 | chr22 | 43044218 | 43044218 | rs200553600 | + | - | -/G | insertion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.960514 |
CYB5R3 | chr22 | 43044221 | 43044221 | rs201470795 | + | - | -/G | insertion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.965106 |
CYB5R3 | chr22 | 43044283 | 43044289 | rs8190375 | - | TAGAGG | -/CCTCTA | deletion | intron,near-gene-5 | 8 | 1000GENOMES,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,EGP_SNPS,GMI,LUNTER, | 2 | 0.672340 |
CYB5R3 | chr22 | 43044484 | 43044485 | rs6002856 | + | G | G/T | single | intron,near-gene-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,SC_SNP,TISHKOFF, | 2 | 0.988040 |
CYB5R3 | chr22 | 43044570 | 43044570 | rs8190373 | - | - | C/T | single | intron,near-gene-5 | 1 | EGP_SNPS, | 2 | 0.790698 |
CYB5R3 | chr22 | 43044570 | 43044570 | rs199960666 | + | - | -/GGAC | insertion | intron,near-gene-5 | 3 | 1000GENOMES,EGP_SNPS,LUNTER, | 2 | 0.986809 |
CYB5R3 | chr22 | 43044571 | 43044572 | rs60631826 | + | G | A/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,GMI,HGSV,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.247824 |
CYB5R3 | chr22 | 43044764 | 43044765 | rs8190371 | - | A | C/T | single | intron,near-gene-5 | 8 | 1000GENOMES,ABI,AFFY,EGP_SNPS,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.072032 |
CYB5R3 | chr22 | 43044857 | 43044858 | rs201286455 | + | A | -/A | deletion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.189624 |
CYB5R3 | chr22 | 43044862 | 43044863 | rs201483447 | + | A | -/A | deletion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.184573 |
CYB5R3 | chr22 | 43045457 | 43045458 | rs8190368 | - | G | A/C | single | near-gene-5 | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.230475 |
CYB5R3 | chr22 | 43045512 | 43045512 | rs8190367 | - | - | -/A | insertion | near-gene-5 | 3 | EGP_SNPS,LUNTER,TISHKOFF, | 2 | 0.969880 |
CYB5R3 | chr22 | 43045536 | 43045537 | rs8190366 | - | T | A/G | single | near-gene-5 | 6 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,KYUGEN,SSMP, | 2 | 0.763877 |
CYB5R3 | chr22 | 43045564 | 43045565 | rs8190365 | - | C | A/G | single | near-gene-5 | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.012831 |
CYB5R3 | chr22 | 43045571 | 43045572 | rs73888347 | + | C | A/C | single | near-gene-5 | 4 | 1000GENOMES,ILLUMINA-UK,TISHKOFF,TREPLAB, | 2 | 0.021520 |
PRODH | chr22 | 18923986 | 18923987 | rs73157204 | + | G | C/G | single | near-gene-5,untranslated-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP, | 2 | 0.079285 |
TXNRD2 | chr22 | 19927286 | 19927287 | rs114214004 | + | G | G/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.986498 |
TXNRD2 | chr22 | 19927692 | 19927693 | rs9332311 | + | G | A/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,EGP_SNPS,GMI,PJP,SC_SNP,SSMP, | 2 | 0.217373 |
TXNRD2 | chr22 | 19927999 | 19928000 | rs9332314 | + | C | C/T | single | intron,near-gene-5 | 5 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SNP500CANCER, | 2 | 0.974972 |
TXNRD2 | chr22 | 19928021 | 19928022 | rs1800706 | + | G | A/G | single | intron,near-gene-5 | 15 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGBASE,ILLUMINA,RIKENSNPRC,SC_SNP,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.217680 |
TXNRD2 | chr22 | 19928091 | 19928092 | rs2075507 | + | G | A/G | single | intron,near-gene-5 | 26 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA-UK,KIDDLAB,PHARMGKB_PPII,PJP,RIKENSNPRC,SC_JCM,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.642659 |
TXNRD2 | chr22 | 19928198 | 19928199 | rs9332315 | + | T | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,SNP500CANCER,SSMP, | 2 | 0.011201 |
TXNRD2 | chr22 | 19928324 | 19928325 | rs45478499 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.011527 |
TXNRD2 | chr22 | 19928353 | 19928354 | rs45521239 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,PHARMGKB_PPII,TISHKOFF, | 2 | 0.010807 |
TXNRD2 | chr22 | 19928581 | 19928582 | rs45551837 | + | G | A/G | single | intron,near-gene-5 | 6 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PHARMGKB_PPII,SSMP, | 2 | 0.038497 |
TXNRD2 | chr22 | 19928631 | 19928632 | rs138696259 | + | C | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987144 |
TXNRD2 | chr22 | 19928805 | 19928806 | rs4646310 | + | G | A/G | single | intron,near-gene-5 | 16 | 1000GENOMES,ABI,COMPLETE_GENOMICS,CSHL-HAPMAP,HUMANGENOME_JCVI,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,KYUGEN,PHARMGKB_PPII,PJP,RIKENSNPRC,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.110362 |
TXNRD2 | chr22 | 19928883 | 19928884 | rs2020917 | + | C | C/T | single | intron,near-gene-5 | 16 | 1000GENOMES,BRINCOR,COMPLETE_GENOMICS,GMI,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,KYUGEN,PHARMGKB_PPII,RIKENSNPRC,SC_SNP,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.776523 |
TXNRD2 | chr22 | 19928945 | 19928946 | rs45559342 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,PHARMGKB_PPII,SNP500CANCER, | 2 | 0.011646 |
TXNRD2 | chr22 | 19929026 | 19929027 | rs13306278 | + | C | C/T | single | intron,near-gene-5 | 11 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,IMCJ-GDT,PHARMGKB_PPII,PJP,SI_EXO,SSMP, | 2 | 0.917507 |
TXNRD2 | chr22 | 19929141 | 19929141 | rs45511293 | + | - | -/G | insertion | intron,near-gene-5 | 4 | 1000GENOMES,LUNTER,PHARMGKB_PPII,TISHKOFF, | 2 | 0.953761 |
ACOX2 | chr3 | 58522953 | 58522954 | rs6793180 | + | T | G/T | single | near-gene-5 | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.979281 |
ACOX2 | chr3 | 58522994 | 58523012 | rs11276507 | + | GCTCTCAAGCCCTTG | -/GCTCTCAAGCCCT | deletion | near-gene-5 | 2 | 1000GENOMES,DEVINE_LAB, | 2 | 0.100551 |
ETFDH | chr4 | 159593369 | 159593370 | rs113981461 | + | G | A/G | single | near-gene-5,ncRNA,untranslated-5 | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.017431 |
ETFDH | chr4 | 159593698 | 159593699 | rs75443706 | + | C | A/C | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,NHLBI-ESP,TISHKOFF, | 2 | 0.016521 |
ETFDH | chr4 | 159593787 | 159593788 | rs112649720 | + | T | A/T | single | intron,near-gene-5 | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.017431 |
ETFDH | chr4 | 159593907 | 159593908 | rs78185171 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.981707 |
ETFDH | chr4 | 159594048 | 159594049 | rs80050238 | + | G | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017857 |
ETFDH | chr4 | 159594156 | 159594157 | rs116738579 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.982143 |
ETFDH | chr4 | 159594180 | 159594181 | rs4690907 | + | C | A/C | single | intron,near-gene-5 | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,SSMP,WI_SSAHASNP, | 2 | 0.028008 |
ETFDH | chr4 | 159594408 | 159594409 | rs140117449 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982094 |
ETFDH | chr4 | 159594749 | 159594750 | rs114653187 | + | G | G/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.980401 |
ETFDH | chr4 | 159594816 | 159594817 | rs75829254 | + | T | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017857 |
ETFDH | chr4 | 159594890 | 159594891 | rs116032941 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.010009 |
ETFDH | chr4 | 159595060 | 159595061 | rs78051411 | + | T | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017857 |
ETFDH | chr4 | 159595091 | 159595092 | rs191392725 | + | C | A/C | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.015611 |
ETFDH | chr4 | 159595092 | 159595093 | rs182838657 | + | A | A/G | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.984389 |
ETFDH | chr4 | 159595116 | 159595117 | rs78439212 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017422 |
ETFDH | chr4 | 159595228 | 159595229 | rs76433339 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.018293 |
MTRR | chr5 | 7851922 | 7851923 | rs7714950 | + | C | C/T | single | near-gene-5 | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.670475 |
MTRR | chr5 | 7852166 | 7852167 | rs162023 | + | A | A/G | single | near-gene-5 | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.512069 |
MTRR | chr5 | 7852281 | 7852282 | rs326205 | + | G | A/G | single | near-gene-5 | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.563031 |
MTRR | chr5 | 7852406 | 7852407 | rs79931532 | + | G | G/T | single | near-gene-5 | 5 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,ILLUMINA,SSMP, | 2 | 0.975688 |
MTRR | chr5 | 7852529 | 7852530 | rs79562536 | + | T | G/T | single | near-gene-5 | 1 | 1000GENOMES, | 2 | 0.010453 |
MTRR | chr5 | 7852811 | 7852812 | rs75874701 | + | T | A/T | single | near-gene-5 | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.033085 |
MTRR | chr5 | 7852977 | 7852978 | rs12653983 | + | C | A/C | single | near-gene-5 | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.305403 |
MTRR | chr5 | 7853041 | 7853042 | rs74647306 | + | G | A/G | single | near-gene-5 | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.032672 |
MTRR | chr5 | 7853181 | 7853182 | rs112112268 | + | C | C/G | single | near-gene-5 | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.981193 |
MTRR | chr5 | 7853295 | 7853296 | rs75171450 | + | C | C/T | single | near-gene-5 | 1 | 1000GENOMES, | 2 | 0.977807 |
MTRR | chr5 | 7853303 | 7853304 | rs326206 | + | C | A/C | single | near-gene-5 | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.082493 |
MTRR | chr5 | 7868029 | 7868030 | rs2966952 | + | T | C/T | single | intron,near-gene-5,missense | 27 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.834742 |
MTRR | chr5 | 7868268 | 7868269 | rs3733781 | - | A | C/T | single | intron,near-gene-5,untranslated-5 | 8 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,YUSUKE, | 2 | 0.123683 |
MTRR | chr5 | 7868542 | 7868543 | rs326118 | + | T | G/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PHARMGKB_PPII,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.232664 |
MTRR | chr5 | 7868865 | 7868866 | rs3822445 | - | G | C/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA-UK,PHARMGKB_PPII,SSMP,TISHKOFF,YUSUKE, | 2 | 0.859432 |
MTRR | chr5 | 7869234 | 7869235 | rs72716536 | + | T | C/T | single | near-gene-5,untranslated-5 | 9 | 1000GENOMES,BL,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SSMP,TISHKOFF, | 2 | 0.170937 |
MTRR | chr5 | 7869383 | 7869386 | rs150132234 | + | CTC | -/CTC | deletion | intron,near-gene-5 | 3 | 1000GENOMES,LUNTER,WARNICH_LAB, | 2 | 0.035813 |
MTRR | chr5 | 7869385 | 7869388 | rs141755990 | + | CCT | -/CCT/CCTCT | in-del | intron,near-gene-5 | 2 | PHARMGKB_PPII,TISHKOFF, | 2 | 0.038328 |
MTRR | chr5 | 7869455 | 7869456 | rs34828626 | + | C | -/C | deletion | intron,near-gene-5 | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,LUNTER,PHARMGKB_PPII,PJP,SSMP, | 2 | 0.214482 |
MTRR | chr5 | 7869577 | 7869578 | rs75888760 | + | C | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.857339 |
MTRR | chr5 | 7869590 | 7869591 | rs138374466 | + | C | C/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.988981 |
MTRR | chr5 | 7869702 | 7869703 | rs75772655 | + | G | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.137156 |
MTRR | chr5 | 7869883 | 7869884 | rs79227708 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.083486 |
MTRR | chr5 | 7869899 | 7869900 | rs73737651 | + | G | C/G | single | intron,near-gene-5 | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.094867 |
MTRR | chr5 | 7870082 | 7870083 | rs326119 | + | C | A/C | single | intron,near-gene-5 | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,KYUGEN,PHARMGKB_PPII,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.601280 |
MTRR | chr5 | 7870094 | 7870095 | rs12653464 | + | G | A/G | single | intron,near-gene-5 | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,KYUGEN,PHARMGKB_PPII,SSMP,TISHKOFF, | 2 | 0.247938 |
MTRR | chr5 | 7870972 | 7870973 | rs1801394 | + | A | A/G | single | near-gene-5,missense | 29 | 1000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA,KYUGEN,NHLBI-ESP,OMICIA,OMIM-CURATED-RECORDS,PHARMGKB_PPII,PJP,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.572342 |
SDHA | chr5 | 218381 | 218381 | rs3214561 | - | - | -/G | insertion | near-gene-5,untranslated-5 | 4 | 1000GENOMES,LUNTER,SSMP,YUSUKE, | 2 | 0.787879 |
SDHA | chr5 | 218387 | 218387 | rs35805262 | + | - | -/C | insertion | near-gene-5,untranslated-5 | 2 | HGSV,LARRIBA, | 2 | 0.882023 |
SDHA | chr5 | 218597 | 218598 | rs2303740 | - | G | C/T | single | intron,near-gene-5 | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,YUSUKE, | 2 | 0.649588 |
SDHA | chr5 | 218809 | 218810 | rs1864090 | - | C | A/G | single | intron,near-gene-5 | 2 | SSMP,TSC-CSHL, | 2 | 0.020667 |
SDHA | chr5 | 219021 | 219022 | rs10054902 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP,WI_SSAHASNP, | 2 | 0.298624 |
SDHA | chr5 | 219137 | 219138 | rs10061004 | + | C | C/G | single | intron,near-gene-5 | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,ENSEMBL,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.782967 |
SDHA | chr5 | 219327 | 219328 | rs10067482 | + | T | G/T | single | intron,near-gene-5 | 11 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.217749 |
SDHA | chr5 | 219396 | 219396 | rs58226981 | + | - | -/TT | insertion | intron,near-gene-5 | 7 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.783945 |
SDHA | chr5 | 219505 | 219509 | rs146146961 | + | ACCC | -/ACCC | deletion | intron,near-gene-5 | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.044077 |
SDHA | chr5 | 219548 | 219549 | rs6859848 | + | A | A/G | single | intron,near-gene-5 | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.722527 |
SDHA | chr5 | 219560 | 219561 | rs6859853 | + | A | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,BCM_SSAHASNP,HGSV,TISHKOFF, | 2 | 0.913303 |
SDHA | chr5 | 219906 | 219907 | rs138004841 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,SSMP, | 2 | 0.988981 |
SDHA | chr5 | 220002 | 220002 | rs56026450 | + | - | -/T | insertion | intron,near-gene-5 | 7 | 1000GENOMES,BUSHMAN,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.783945 |
SDHA | chr5 | 220229 | 220231 | rs201995405 | + | AG | -/AG | deletion | intron,near-gene-5 | 2 | 1000GENOMES,LUNTER, | 2 | 0.016529 |
ENPP3 | chr6 | 132022991 | 132022992 | rs112641550 | + | A | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.949541 |
ENPP3 | chr6 | 132023033 | 132023034 | rs150578170 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,GMI, | 2 | 0.828283 |
ENPP3 | chr6 | 132023129 | 132023131 | rs201952293 | + | AT | -/AT | deletion | intron,near-gene-5 | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.042700 |
ENPP3 | chr6 | 132023165 | 132023166 | rs200398525 | + | A | -/A | deletion | intron,near-gene-5 | 3 | 1000GENOMES,BILGI_BIOE,LUNTER, | 2 | 0.058770 |
ENPP3 | chr6 | 132023625 | 132023627 | rs140349321 | + | TT | -/TT | deletion | intron,near-gene-5 | 2 | 1000GENOMES,LUNTER, | 2 | 0.068411 |
ENPP3 | chr6 | 132033371 | 132033372 | rs143146055 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,GMI, | 2 | 0.166208 |
ENPP3 | chr6 | 132033682 | 132033683 | rs17090727 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,PERLEGEN, | 2 | 0.960708 |
ENPP3 | chr6 | 132033691 | 132033692 | rs17090723 | + | T | C/T | single | intron,near-gene-5 | 1 | PERLEGEN, | 2 | 0.335714 |
POR | chr7 | 75542786 | 75542787 | rs7799657 | + | C | C/T | single | near-gene-5 | 3 | 1000GENOMES,HGSV,WI_SSAHASNP, | 2 | 0.988084 |
POR | chr7 | 75542947 | 75542948 | rs149371800 | + | A | A/G | single | near-gene-5 | 1 | 1000GENOMES, | 2 | 0.984848 |
POR | chr7 | 75544211 | 75544212 | rs12537282 | + | C | C/G/T | single | near-gene-5 | 7 | 1000GENOMES,ABI,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,PHARMGKB_PMT,TISHKOFF, | 2 | 0.952681 |
POR | chr7 | 75544246 | 75544247 | rs72553971 | + | C | A/C | single | near-gene-5 | 3 | 1000GENOMES,ILLUMINA,PHARMGKB_PMT, | 2 | 0.026216 |
POR | chr7 | 75544267 | 75544268 | rs72553972 | + | C | A/C | single | near-gene-5 | 4 | 1000GENOMES,ILLUMINA,PHARMGKB_PMT,SSMP, | 2 | 0.089459 |
POR | chr7 | 75544454 | 75544455 | rs3823884 | - | A | G/T | single | near-gene-5,untranslated-5 | 16 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA,PERLEGEN,PHARMGKB_PMT,PJP,SSMP,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.430056 |
POR | chr7 | 75571305 | 75571306 | rs58648820 | + | G | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.072477 |
POR | chr7 | 75571335 | 75571336 | rs112274825 | + | A | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.980275 |
POR | chr7 | 75572557 | 75572558 | rs139772877 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.983471 |
POR | chr7 | 75572923 | 75572924 | rs73702701 | + | A | A/C | single | intron,near-gene-5 | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.978440 |
SUGCT | chr7 | 40174672 | 40174673 | rs7793074 | + | C | A/C | single | coding-synon,near-gene-5 | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,WI_SSAHASNP, | 2 | 0.035714 |
SUGCT | chr7 | 40175243 | 40175244 | rs142237061 | + | T | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.013774 |
SUGCT | chr7 | 40175963 | 40175964 | rs115025708 | + | G | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017422 |
SUGCT | chr7 | 40175983 | 40175984 | rs186511123 | + | T | A/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.010101 |
SLC25A32 | chr8 | 104425303 | 104425304 | rs3098241 | - | A | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.216899 |
SLC25A32 | chr8 | 104425608 | 104425609 | rs3134291 | + | C | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.547898 |
SLC25A32 | chr8 | 104425879 | 104425880 | rs115361595 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987369 |
SLC25A32 | chr8 | 104426044 | 104426045 | rs3134292 | + | C | A/C | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.258745 |
SLC25A32 | chr8 | 104426083 | 104426084 | rs3134293 | + | C | C/T | single | intron,near-gene-5 | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP, | 2 | 0.793236 |
SLC25A32 | chr8 | 104426244 | 104426245 | rs3133817 | + | A | A/G | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,AFFY,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,YUSUKE, | 2 | 0.736441 |
SLC25A32 | chr8 | 104426530 | 104426531 | rs28630640 | + | C | C/T | single | intron,near-gene-5 | 10 | 1000GENOMES,ABI,BL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.943681 |
SLC25A32 | chr8 | 104426791 | 104426792 | rs73699799 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.987615 |
SLC25A32 | chr8 | 104426797 | 104426798 | rs3134294 | + | A | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,SC_JCM, | 2 | 0.966057 |
SLC25A32 | chr8 | 104426909 | 104426910 | rs5893654 | + | T | -/T | deletion | intron,near-gene-5 | 3 | 1000GENOMES,ABI,DEVINE_LAB, | 2 | 0.443119 |
SLC52A2 | chr8 | 145582247 | 145582248 | rs144713518 | + | G | A/G | single | near-gene-5,ncRNA,untranslated-5 | 1 | 1000GENOMES, | 2 | 0.012397 |
SLC52A2 | chr8 | 145582293 | 145582294 | rs115940535 | + | C | A/C | single | intron,near-gene-5,ncRNA,untranslated-5 | 1 | 1000GENOMES, | 2 | 0.030923 |
SLC52A2 | chr8 | 145582739 | 145582740 | rs114304511 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
SLC52A2 | chr8 | 145582808 | 145582809 | rs115365198 | + | C | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985927 |
SLC52A2 | chr8 | 145582838 | 145582839 | rs3817681 | + | T | C/T | single | intron,near-gene-5 | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.417187 |
SLC52A2 | chr8 | 145578811 | 145578812 | rs4515595 | - | G | C/T | single | near-gene-3,near-gene-5 | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.710430 |
SLC52A2 | chr8 | 145579703 | 145579704 | rs61747069 | + | T | C/T | single | near-gene-5,missense | 2 | CORNELL,NHLBI-ESP, | 2 | 0.016667 |
SLC52A2 | chr8 | 145579791 | 145579792 | rs2272665 | + | C | A/C | single | near-gene-5,missense | 3 | ILLUMINA,KRIBB_YJKIM,YUSUKE, | 2 | 0.017913 |
SLC52A2 | chr8 | 145579930 | 145579931 | rs200026961 | + | C | C/G | single | intron,near-gene-5 | 2 | BILGI_BIOE,CLINSEQ_SNP, | 2 | 0.820500 |
SLC52A2 | chr8 | 145579931 | 145579932 | rs200985955 | + | C | C/T | single | intron,near-gene-5 | 2 | BILGI_BIOE,CLINSEQ_SNP, | 2 | 0.834500 |
SLC52A2 | chr8 | 145579935 | 145579936 | rs112211890 | + | C | C/T | single | intron,near-gene-5 | 3 | CLINSEQ_SNP,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.773085 |
SLC52A2 | chr8 | 145579952 | 145579953 | rs4993862 | - | T | A/G/T | single | intron,near-gene-5 | 2 | CLINSEQ_SNP,DEVINE_LAB, | 3 | 0.617117 |
SLC52A2 | chr8 | 145579961 | 145579962 | rs77494279 | + | C | C/T | single | near-gene-5,missense | 3 | CLINSEQ_SNP,ENSEMBL,EXOME_CHIP, | 2 | 0.932166 |
SLC52A2 | chr8 | 145579963 | 145579964 | rs75159950 | + | A | A/G | single | coding-synon,near-gene-5 | 4 | CLINSEQ_SNP,ENSEMBL,EXOME_CHIP,ILLUMINA, | 2 | 0.927680 |
SLC52A2 | chr8 | 145579966 | 145579967 | rs77157066 | + | T | C/T | single | coding-synon,near-gene-5 | 2 | CLINSEQ_SNP,ENSEMBL, | 2 | 0.073788 |
SLC52A2 | chr8 | 145580534 | 145580535 | rs61746974 | + | C | C/G | single | near-gene-5,missense | 9 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EXOME_CHIP,GOLDSTEINLAB,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.935919 |
SLC52A2 | chr8 | 145580983 | 145580984 | rs2272666 | + | A | A/G | single | intron,near-gene-5 | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.387120 |
SLC52A2 | chr8 | 145581004 | 145581005 | rs115001185 | + | G | G/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.981707 |
SLC52A2 | chr8 | 145581023 | 145581024 | rs116687799 | + | C | C/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.981707 |