Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
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ENPP3 | chr6 | 132061419 | 132061420 | rs17601580 | + | G | A/G | single | missense | 10 | 1000GENOMES,AFFY,BCM-HGSC-SUB,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SSMP, | 2 | 0.103232 |
IYD | chr6 | 150710631 | 150710632 | rs111758467 | + | A | A/G | single | missense | 6 | 1000GENOMES,BUSHMAN,EXOME_CHIP,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.987964 |
IYD | chr6 | 150713557 | 150713558 | rs35217099 | - | C | C/G | single | missense | 1 | APPLERA_GI, | 2 | 0.014706 |
IYD | chr6 | 150716532 | 150716533 | rs4407723 | + | T | A/T | single | intron,missense | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.195807 |
IYD | chr6 | 150716611 | 150716612 | rs73617694 | + | C | C/T | single | intron,missense | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.986697 |
IYD | chr6 | 150716695 | 150716696 | rs612421 | - | T | A/G | single | intron,missense | 26 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.133209 |
IYD | chr6 | 150716696 | 150716697 | rs4479949 | + | G | A/G | single | intron,missense | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,CLINSEQ_SNP,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SC_JCM,SSMP, | 2 | 0.153534 |
IYD | chr6 | 150719239 | 150719240 | rs73619510 | + | G | A/G | single | coding-synon,missense,untranslated-3 | 7 | 1000GENOMES,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.016934 |
IYD | chr6 | 150719313 | 150719314 | rs36063028 | - | G | C/T | single | missense,untranslated-3 | 13 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,EXOME_CHIP,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.931895 |
DLD | chr7 | 107531728 | 107531729 | rs75077312 | + | G | A/G | single | missense | 6 | 1000GENOMES,BUSHMAN,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ, | 2 | 0.010253 |
DLD | chr7 | 107545413 | 107545414 | rs62001027 | + | C | C/T | single | missense | 1 | CORNELL, | 2 | 0.986111 |
DLD | chr7 | 107569961 | 107569962 | rs35915664 | + | A | A/G | single | missense | 7 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ, | 2 | 0.984689 |
POR | chr7 | 75614385 | 75614386 | rs56010266 | + | T | A/C | single | missense | 1 | XBZ4050KLSIC, | 2 | 0.050505 |
POR | chr7 | 75615005 | 75615006 | rs1057868 | + | C | C/T | single | missense | 19 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,EGP_SNPS,EXOME_CHIP,GMI,ILLUMINA,LEE,MGC_GENOME_DIFF,NHLBI-ESP,PHARMGKB_AB_DME,PHARMGKB_PMT,SEQUENOM,SNP500CANCER,SSMP,TISHKOFF,WIAF-CSNP,YUSUKE, | 2 | 0.723404 |
POR | chr7 | 75615300 | 75615301 | rs56256515 | + | T | C/T | single | missense | 3 | EXOME_CHIP,NHLBI-ESP,XBZ4050KLSIC, | 2 | 0.020202 |
SLC25A32 | chr8 | 104417044 | 104417045 | rs17803441 | + | C | C/T | single | intron,ncRNA,missense | 9 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN, | 2 | 0.952397 |
SLC25A32 | chr8 | 104427358 | 104427359 | rs3134295 | + | A | A/C | single | ncRNA,missense,untranslated-5 | 25 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KYUGEN,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.537010 |
SLC52A2 | chr8 | 145577898 | 145577899 | rs116055973 | + | C | C/T | single | intron,ncRNA,missense | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
SLC52A2 | chr8 | 145579703 | 145579704 | rs61747069 | + | T | C/T | single | near-gene-5,missense | 2 | CORNELL,NHLBI-ESP, | 2 | 0.016667 |
SLC52A2 | chr8 | 145579791 | 145579792 | rs2272665 | + | C | A/C | single | near-gene-5,missense | 3 | ILLUMINA,KRIBB_YJKIM,YUSUKE, | 2 | 0.017913 |
SLC52A2 | chr8 | 145579961 | 145579962 | rs77494279 | + | C | C/T | single | near-gene-5,missense | 3 | CLINSEQ_SNP,ENSEMBL,EXOME_CHIP, | 2 | 0.932166 |
SLC52A2 | chr8 | 145580534 | 145580535 | rs61746974 | + | C | C/G | single | near-gene-5,missense | 9 | 1000GENOMES,CLINSEQ_SNP,CORNELL,EXOME_CHIP,GOLDSTEINLAB,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.935919 |
SLC52A2 | chr8 | 145581949 | 145581950 | rs200282665 | + | C | C/G | single | near-gene-5,missense | 2 | 1000GENOMES,NHLBI-ESP, | 2 | 0.985308 |
AIFM1 | chrX | 129281845 | 129281846 | rs61730894 | + | C | C/T | single | intron,missense | 1 | CORNELL, | 2 | 0.987179 |