Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
DHCR | chr1 | 55322867 | 55322868 | rs115721876 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.020888 |
DHCR | chr1 | 55323435 | 55323436 | rs71637874 | + | C | A/C | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.023352 |
DHCR | chr1 | 55323537 | 55323538 | rs112246846 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984404 |
DHCR | chr1 | 55323808 | 55323809 | rs12117617 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.066998 |
DHCR | chr1 | 55323837 | 55323838 | rs6676774 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.437813 |
DHCR | chr1 | 55324123 | 55324124 | rs115251523 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987805 |
DHCR | chr1 | 55324149 | 55324150 | rs12133305 | + | C | C/T | single | intron | 8 | 1000GENOMES,AFFY,BL,COMPLETE_GENOMICS,GMI,KRIBB_YJKIM,SC_SNP,SSMP, | 2 | 0.917828 |
DHCR | chr1 | 55324371 | 55324372 | rs2288314 | + | G | A/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,YUSUKE, | 2 | 0.124084 |
DHCR | chr1 | 55324868 | 55324869 | rs13373956 | + | G | G/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.947022 |
DHCR | chr1 | 55324872 | 55324873 | rs2288315 | + | G | C/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.931660 |
DHCR | chr1 | 55324964 | 55324966 | rs139707914 | + | GA | -/GA | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.062443 |
DHCR | chr1 | 55325240 | 55325241 | rs12562548 | + | G | G/T | single | intron | 6 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL,GMI,SSAHASNP,SSMP, | 2 | 0.974312 |
DHCR | chr1 | 55325308 | 55325309 | rs12067125 | + | T | G/T | single | intron | 6 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP, | 2 | 0.082569 |
DHCR | chr1 | 55325487 | 55325488 | rs57777659 | + | T | C/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.302060 |
DHCR | chr1 | 55325793 | 55325794 | rs11206455 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.339248 |
DHCR | chr1 | 55325863 | 55325864 | rs113419309 | + | C | A/C | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.014679 |
DHCR | chr1 | 55326074 | 55326075 | rs78842553 | + | A | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.969266 |
DHCR | chr1 | 55326139 | 55326140 | rs6588533 | + | C | C/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.571648 |
DHCR | chr1 | 55326344 | 55326345 | rs4927168 | + | A | A/C | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.216525 |
DHCR | chr1 | 55326410 | 55326411 | rs113543107 | + | C | C/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.987615 |
DHCR | chr1 | 55326424 | 55326425 | rs4927169 | + | G | C/G | single | intron | 10 | 1000GENOMES,BGI,BL,CSHL-HAPMAP,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.428311 |
DHCR | chr1 | 55326425 | 55326426 | rs4927170 | + | G | A/G | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.778134 |
DHCR | chr1 | 55326465 | 55326466 | rs146621180 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.022957 |
DHCR | chr1 | 55326485 | 55326486 | rs4927171 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.450775 |
DHCR | chr1 | 55326519 | 55326520 | rs111510955 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.039908 |
DHCR | chr1 | 55326585 | 55326586 | rs10888882 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.351869 |
DHCR | chr1 | 55326719 | 55326720 | rs6675891 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.630306 |
DHCR | chr1 | 55326932 | 55326933 | rs6676123 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.639443 |
DHCR | chr1 | 55327143 | 55327144 | rs78647471 | + | C | C/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.934404 |
DHCR | chr1 | 55327366 | 55327367 | rs72673883 | + | C | A/C | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.068238 |
DHCR | chr1 | 55327401 | 55327402 | rs602671 | + | A | A/C | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.403381 |
DHCR | chr1 | 55327491 | 55327492 | rs6666716 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.450642 |
DHCR | chr1 | 55327549 | 55327550 | rs72901600 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.988991 |
DHCR | chr1 | 55327554 | 55327555 | rs74606125 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988676 |
DHCR | chr1 | 55327588 | 55327589 | rs72903503 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.879579 |
DHCR | chr1 | 55327872 | 55327876 | rs111480286 | + | ACAG | -/ACAG | deletion | intron | 5 | 1000GENOMES,BUSHMAN,GMI,LUNTER,SSMP, | 2 | 0.120183 |
DHCR | chr1 | 55327939 | 55327940 | rs12025718 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.289531 |
DHCR | chr1 | 55328054 | 55328055 | rs34292018 | + | A | A/G | single | intron | 7 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.945055 |
DHCR | chr1 | 55328101 | 55328102 | rs675252 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.489517 |
DHCR | chr1 | 55328147 | 55328148 | rs675320 | + | T | C/T | single | intron | 8 | 1000GENOMES,ABI,GMI,KWOK,SC_JCM,SC_SNP,SSMP,TSC-CSHL, | 2 | 0.042406 |
DHCR | chr1 | 55328150 | 55328151 | rs79460737 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.880037 |
DHCR | chr1 | 55328256 | 55328257 | rs72903506 | + | T | A/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.053114 |
DHCR | chr1 | 55328564 | 55328565 | rs113518014 | + | T | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.048579 |
DHCR | chr1 | 55328566 | 55328567 | rs187282498 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.018825 |
DHCR | chr1 | 55328603 | 55328604 | rs7524913 | + | C | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.883135 |
DHCR | chr1 | 55328625 | 55328626 | rs7536507 | + | A | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.878552 |
DHCR | chr1 | 55328682 | 55328683 | rs148472031 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.974747 |
DHCR | chr1 | 55329104 | 55329105 | rs582222 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.613947 |
DHCR | chr1 | 55329106 | 55329107 | rs11206456 | + | C | C/T | single | intron | 4 | 1000GENOMES,BL,GMI,SC_SNP, | 2 | 0.916391 |
DHCR | chr1 | 55329500 | 55329501 | rs4927173 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.043676 |
DHCR | chr1 | 55329518 | 55329519 | rs72903513 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.880495 |
DHCR | chr1 | 55329731 | 55329732 | rs72903516 | + | G | G/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.897342 |
DHCR | chr1 | 55330141 | 55330142 | rs114819441 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.985640 |
DHCR | chr1 | 55330337 | 55330338 | rs149084152 | + | A | -/A | deletion | intron | 4 | 1000GENOMES,LUNTER,SSMP,TISHKOFF, | 2 | 0.065657 |
DHCR | chr1 | 55330549 | 55330550 | rs72903518 | + | G | C/G | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.055352 |
DHCR | chr1 | 55330629 | 55330630 | rs17111142 | + | C | C/G | single | intron | 8 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.920440 |
DHCR | chr1 | 55330705 | 55330706 | rs74774143 | + | C | C/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.933945 |
DHCR | chr1 | 55330755 | 55330756 | rs2303533 | + | G | C/G | single | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 3 | 0.356728 |
DHCR | chr1 | 55330965 | 55330966 | rs611057 | + | T | C/T | single | intron | 28 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.986088 |
DHCR | chr1 | 55331640 | 55331641 | rs80336900 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.043951 |
DHCR | chr1 | 55332002 | 55332003 | rs6677915 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,GMI,ILLUMINA,SSMP, | 2 | 0.082110 |
DHCR | chr1 | 55332084 | 55332085 | rs116871890 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.040905 |
DHCR | chr1 | 55332342 | 55332343 | rs11366405 | + | C | -/C | deletion | intron | 10 | 1000GENOMES,ABI,BL,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.364679 |
DHCR | chr1 | 55332455 | 55332456 | rs74502762 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.028746 |
DHCR | chr1 | 55332471 | 55332471 | rs200224855 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.988062 |
DHCR | chr1 | 55332535 | 55332536 | rs628508 | + | C | C/G | single | intron | 23 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.070941 |
DHCR | chr1 | 55332773 | 55332774 | rs640011 | + | T | C/T | single | intron | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 1.000000 |
DHCR | chr1 | 55332799 | 55332800 | rs640036 | + | G | C/G | single | intron | 6 | 1000GENOMES,ABI,KWOK,SC_JCM,SC_SNP,TSC-CSHL, | 2 | 0.017422 |
DHCR | chr1 | 55332906 | 55332907 | rs78167420 | + | G | G/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.968807 |
DHCR | chr1 | 55333134 | 55333135 | rs2059690 | + | G | G/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.485441 |
DHCR | chr1 | 55333212 | 55333213 | rs12129816 | + | A | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.911927 |
DHCR | chr1 | 55333452 | 55333453 | rs642737 | + | A | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.436316 |
DHCR | chr1 | 55333524 | 55333525 | rs600491 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.633751 |
DHCR | chr1 | 55333599 | 55333600 | rs2278193 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.364840 |
DHCR | chr1 | 55333617 | 55333618 | rs10449751 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SC_SNP,SSMP, | 2 | 0.957781 |
DHCR | chr1 | 55333783 | 55333784 | rs2278194 | + | T | C/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF,YUSUKE, | 2 | 0.058716 |
DHCR | chr1 | 55333864 | 55333865 | rs12137364 | + | C | C/T | single | intron | 8 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SC_SNP,SSMP, | 2 | 0.918040 |
DHCR | chr1 | 55333939 | 55333940 | rs612551 | + | G | A/G | single | intron | 4 | 1000GENOMES,KWOK,SC_JCM,SC_SNP, | 2 | 0.015151 |
DHCR | chr1 | 55333998 | 55333999 | rs112673016 | + | C | C/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.987615 |
DHCR | chr1 | 55334000 | 55334001 | rs190934192 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.015151 |
DHCR | chr1 | 55334099 | 55334100 | rs182848559 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.016070 |
DHCR | chr1 | 55334213 | 55334214 | rs2288316 | + | A | A/C | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,YUSUKE, | 2 | 0.953712 |
DHCR | chr1 | 55334344 | 55334345 | rs6695847 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SC_SNP,SSMP, | 2 | 0.445971 |
DHCR | chr1 | 55334348 | 55334349 | rs6687489 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_SNP,SSMP, | 2 | 0.441392 |
DHCR | chr1 | 55334382 | 55334383 | rs142241349 | + | G | -/G | deletion | intron | 2 | 1000GENOMES,BILGI_BIOE, | 2 | 0.379706 |
DHCR | chr1 | 55334388 | 55334389 | rs1180860 | + | T | C/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,KWOK,WI_SSAHASNP, | 2 | 0.423993 |
DHCR | chr1 | 55334567 | 55334568 | rs615203 | + | C | C/T | single | intron | 7 | 1000GENOMES,GMI,KWOK,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.956382 |
DHCR | chr1 | 55334694 | 55334695 | rs626079 | + | G | A/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.552920 |
DHCR | chr1 | 55334797 | 55334801 | rs140670122 | + | ACAA | -/ACAA | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.011019 |
DHCR | chr1 | 55334890 | 55334891 | rs2288318 | + | C | A/C | single | intron | 4 | 1000GENOMES,GMI,SSMP,YUSUKE, | 2 | 0.042219 |
DHCR | chr1 | 55335301 | 55335302 | rs671701 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.466210 |
DHCR | chr1 | 55335708 | 55335709 | rs673541 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP, | 2 | 0.555100 |
DHCR | chr1 | 55335742 | 55335743 | rs113387019 | + | T | A/T | single | intron | 3 | 1000GENOMES,BUSHMAN,GMI, | 2 | 0.059633 |
DHCR | chr1 | 55335742 | 55335743 | rs201857004 | + | T | -/T | deletion | intron | 1 | 1000GENOMES, | 2 | 0.050964 |
DHCR | chr1 | 55335766 | 55335767 | rs111257553 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.927523 |
DHCR | chr1 | 55336096 | 55336097 | rs11206457 | + | T | A/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.340523 |
DHCR | chr1 | 55336166 | 55336167 | rs685920 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.604353 |
DHCR | chr1 | 55336388 | 55336389 | rs687146 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.583029 |
DHCR | chr1 | 55336949 | 55336950 | rs608458 | + | C | C/G | single | intron | 21 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.460327 |
DHCR | chr1 | 55337314 | 55337315 | rs2303534 | + | C | C/G | single | intron | 13 | 1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.956835 |
DHCR | chr1 | 55337379 | 55337380 | rs2303535 | + | A | A/G | single | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,YUSUKE, | 2 | 0.932611 |
DHCR | chr1 | 55337445 | 55337446 | rs12119804 | + | T | C/T | single | intron | 7 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.091743 |
DHCR | chr1 | 55337806 | 55337813 | rs140292451 | + | ACAAGTA | -/ACAAGTA | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.019743 |
DHCR | chr1 | 55337815 | 55337816 | rs1002778 | + | G | A/G/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.942202 |
DHCR | chr1 | 55337884 | 55337885 | rs57782388 | + | A | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.957837 |
DHCR | chr1 | 55338237 | 55338238 | rs57697055 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.950392 |
DHCR | chr1 | 55338415 | 55338416 | rs149796574 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.987144 |
DHCR | chr1 | 55338678 | 55338679 | rs7551288 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.653407 |
DHCR | chr1 | 55338960 | 55338963 | rs147168531 | + | AAC | -/AAC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.011019 |
DHCR | chr1 | 55338963 | 55338964 | rs76716074 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,ILLUMINA,SSMP, | 2 | 0.947199 |
DHCR | chr1 | 55339085 | 55339086 | rs6686859 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.710600 |
DHCR | chr1 | 55339132 | 55339133 | rs113793661 | + | A | A/C | single | intron | 4 | 1000GENOMES,BUSHMAN,GMI,SSMP, | 2 | 0.961927 |
DHCR | chr1 | 55339271 | 55339272 | rs35786633 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.700687 |
DHCR | chr1 | 55339352 | 55339353 | rs639731 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.912489 |
DHCR | chr1 | 55339383 | 55339384 | rs112000395 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.078899 |
DHCR | chr1 | 55339437 | 55339438 | rs597021 | + | G | G/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.396347 |
DHCR | chr1 | 55339760 | 55339761 | rs75116054 | + | G | C/T | single | intron | 2 | ENSEMBL,GMI, | 2 | 0.200000 |
DHCR | chr1 | 55340182 | 55340183 | rs113493911 | + | T | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,GMI,SSMP, | 2 | 0.038073 |
DHCR | chr1 | 55340373 | 55340374 | rs79022190 | + | T | A/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.043081 |
DHCR | chr1 | 55340380 | 55340381 | rs77830691 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989121 |
DHCR | chr1 | 55340955 | 55340956 | rs2075389 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,HGBASE,SSMP,YUSUKE, | 2 | 0.095214 |
DHCR | chr1 | 55341105 | 55341106 | rs2075390 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.646154 |
DHCR | chr1 | 55341291 | 55341292 | rs143402560 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012397 |
DHCR | chr1 | 55341350 | 55341351 | rs626452 | + | G | G/T | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.398723 |
DHCR | chr1 | 55341392 | 55341393 | rs2075391 | + | A | A/T | single | intron | 5 | 1000GENOMES,GMI,SSMP,TISHKOFF,YUSUKE, | 2 | 0.905694 |
DHCR | chr1 | 55341518 | 55341519 | rs2075392 | + | C | C/T | single | intron | 5 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF,YUSUKE, | 2 | 0.909656 |
DHCR | chr1 | 55341914 | 55341915 | rs638944 | + | T | G/T | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.459113 |
DHCR | chr1 | 55341976 | 55341977 | rs72673901 | + | C | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.983029 |
DHCR | chr1 | 55342051 | 55342052 | rs639796 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.478995 |
DHCR | chr1 | 55342485 | 55342486 | rs685004 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.421005 |
DHCR | chr1 | 55342787 | 55342788 | rs12125177 | + | T | A/T | single | intron | 5 | 1000GENOMES,GMI,PJP,SC_SNP,SSMP, | 2 | 0.070061 |
DHCR | chr1 | 55342794 | 55342795 | rs588743 | + | A | A/G | single | intron | 10 | 1000GENOMES,AFFY,GMI,KRIBB_YJKIM,KWOK,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.952538 |
DHCR | chr1 | 55342928 | 55342929 | rs589244 | + | T | A/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.488023 |
DHCR | chr1 | 55343036 | 55343042 | rs141082565 | + | ACTTCT | -/ACTTCT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.072085 |
DHCR | chr1 | 55343114 | 55343115 | rs79801423 | + | T | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.045872 |
DHCR | chr1 | 55343121 | 55343122 | rs116711878 | + | A | A/C | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.988251 |
DHCR | chr1 | 55343206 | 55343207 | rs655115 | + | C | C/T | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.173418 |
DHCR | chr1 | 55343492 | 55343493 | rs656444 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.477646 |
DHCR | chr1 | 55343572 | 55343576 | rs143152143 | + | ACTC | -/ACTC | deletion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.040404 |
DHCR | chr1 | 55343865 | 55343865 | rs35447971 | + | - | -/A | insertion | intron | 11 | 1000GENOMES,ABI,BILGI_BIOE,BL,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.522936 |
DHCR | chr1 | 55343956 | 55343957 | rs144212524 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986226 |
DHCR | chr1 | 55344065 | 55344066 | rs111646050 | + | A | A/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SSMP, | 2 | 0.951835 |
DHCR | chr1 | 55344144 | 55344145 | rs139993736 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.955005 |
DHCR | chr1 | 55344482 | 55344483 | rs7553385 | + | A | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.922018 |
DHCR | chr1 | 55344767 | 55344768 | rs607762 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.093224 |
DHCR | chr1 | 55344854 | 55344855 | rs4927175 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,SSMP,WI_SSAHASNP, | 2 | 0.086239 |
DHCR | chr1 | 55345024 | 55345025 | rs13375244 | + | A | A/C/G | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,WUGSC_SSAHASNP, | 2 | 0.925229 |
DHCR | chr1 | 55345154 | 55345155 | rs684718 | + | A | A/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.169160 |
DHCR | chr1 | 55345705 | 55345706 | rs12042996 | + | C | A/C | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.299177 |
DHCR | chr1 | 55345836 | 55345837 | rs589895 | + | C | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.092122 |
DHCR | chr1 | 55345864 | 55345865 | rs72903545 | + | G | A/G | single | intron | 4 | 1000GENOMES,BL,COMPLETE_GENOMICS,SSMP, | 2 | 0.086239 |
DHCR | chr1 | 55346187 | 55346188 | rs11206459 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.721409 |
DHCR | chr1 | 55346396 | 55346397 | rs635648 | + | C | A/C | single | intron | 4 | 1000GENOMES,KWOK,SC_JCM,SC_SNP, | 2 | 0.017422 |
DHCR | chr1 | 55346424 | 55346425 | rs113814482 | + | T | A/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.078899 |
DHCR | chr1 | 55346513 | 55346514 | rs593018 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.479471 |
DHCR | chr1 | 55346563 | 55346564 | rs636222 | + | G | A/G | single | intron | 3 | 1000GENOMES,KWOK,SC_JCM, | 2 | 0.015151 |
DHCR | chr1 | 55346777 | 55346778 | rs142824636 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,WARNICH_LAB, | 2 | 0.037649 |
DHCR | chr1 | 55347107 | 55347108 | rs12032654 | + | A | A/G | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.701376 |
DHCR | chr1 | 55347234 | 55347235 | rs666130 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.510092 |
DHCR | chr1 | 55347324 | 55347325 | rs117181289 | + | A | A/C | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.957354 |
DHCR | chr1 | 55347802 | 55347806 | rs150960999 | + | AAAG | -/AAAG | deletion | intron | 4 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER, | 2 | 0.884298 |
DHCR | chr1 | 55347806 | 55347807 | rs35319903 | + | A | -/A | deletion | intron | 3 | 1000GENOMES,ABI,HUMANGENOME_JCVI, | 2 | 0.860092 |
DHCR | chr1 | 55348125 | 55348126 | rs117523783 | + | T | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.010879 |
DHCR | chr1 | 55348190 | 55348191 | rs680922 | + | G | A/G | single | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 1.000000 |
DHCR | chr1 | 55348245 | 55348246 | rs61613485 | + | C | A/C | single | intron | 6 | 1000GENOMES,BGI,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.061909 |
DHCR | chr1 | 55348308 | 55348309 | rs77668549 | + | A | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA,SSMP, | 2 | 0.927523 |
DHCR | chr1 | 55348440 | 55348441 | rs78026779 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.041340 |
DHCR | chr1 | 55348515 | 55348516 | rs145476689 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.015151 |
DHCR | chr1 | 55349868 | 55349869 | rs665746 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.085725 |
DHCR | chr1 | 55349943 | 55349944 | rs77167838 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.010889 |
DHCR | chr1 | 55350022 | 55350023 | rs601902 | + | A | A/G | single | intron | 23 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.089820 |
DHCR | chr1 | 55350156 | 55350157 | rs114953124 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.025697 |
DHCR | chr1 | 55350295 | 55350296 | rs149354546 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.988981 |
DHCR | chr1 | 55350506 | 55350507 | rs74899804 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.012185 |
DHCR | chr1 | 55351099 | 55351100 | rs12727760 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.622486 |
DHCR | chr1 | 55351327 | 55351328 | rs201270494 | + | C | -/C | deletion | intron | 1 | 1000GENOMES, | 2 | 0.176768 |
DHCR | chr1 | 55351330 | 55351332 | rs55982037 | + | CT | -/CT | deletion | intron | 7 | 1000GENOMES,BILGI_BIOE,GMI,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.181818 |
DHCR | chr1 | 55351469 | 55351470 | rs77720262 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.044386 |
DHCR | chr1 | 55351666 | 55351667 | rs75217923 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA,SSMP, | 2 | 0.956049 |
DHCR | chr1 | 55351724 | 55351725 | rs12125145 | + | G | A/G | single | intron | 7 | 1000GENOMES,BGI,GMI,HGSV,SC_SNP,SSMP,TISHKOFF, | 2 | 0.071952 |
DHCR | chr1 | 55351793 | 55351794 | rs76534369 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.011478 |
DHCR | chr1 | 55351955 | 55351956 | rs72675614 | + | G | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,SSMP,TISHKOFF, | 2 | 0.071133 |
DHCR | chr1 | 55351964 | 55351965 | rs77275526 | + | G | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.059633 |
DHCR | chr1 | 55352308 | 55352309 | rs77444406 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.959095 |
FLAD1 | chr1 | 154956661 | 154956662 | rs6696397 | + | C | A/C | single | intron | 13 | 1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.060000 |
FLAD1 | chr1 | 154956727 | 154956728 | rs78605724 | + | C | C/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989450 |
FLAD1 | chr1 | 154956759 | 154956760 | rs78191343 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.042683 |
FLAD1 | chr1 | 154956984 | 154956985 | rs11590058 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.964253 |
FLAD1 | chr1 | 154957705 | 154957705 | rs200106951 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
FLAD1 | chr1 | 154958066 | 154958067 | rs12096640 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.886239 |
FLAD1 | chr1 | 154958436 | 154958437 | rs189410710 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.012856 |
FLAD1 | chr1 | 154958512 | 154958513 | rs144926241 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.017447 |
FLAD1 | chr1 | 154958515 | 154958516 | rs55699206 | + | T | A/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.019743 |
FLAD1 | chr1 | 154958517 | 154958518 | rs144402334 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.040404 |
FLAD1 | chr1 | 154959520 | 154959521 | rs114699616 | + | C | C/G/T | single | intron | 1 | 1000GENOMES, | 3 | 0.986063 |
FLAD1 | chr1 | 154959881 | 154959882 | rs7525580 | + | A | A/G | single | intron | 12 | 1000GENOMES,AFFY,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.866299 |
FLAD1 | chr1 | 154960018 | 154960019 | rs7528060 | + | T | G/T | single | intron,untranslated-5 | 12 | 1000GENOMES,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.139146 |
FLAD1 | chr1 | 154960064 | 154960065 | rs113906979 | + | G | A/G | single | intron,untranslated-5 | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.016062 |
FLAD1 | chr1 | 154961447 | 154961448 | rs2089247 | + | T | G/T | single | intron,untranslated-3 | 13 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.042271 |
FLAD1 | chr1 | 154961457 | 154961458 | rs2878517 | + | A | A/G | single | intron,untranslated-3 | 13 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.955853 |
FLAD1 | chr1 | 154961705 | 154961706 | rs2089248 | + | A | A/G | single | intron,near-gene-3 | 15 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.887726 |
FLAD1 | chr1 | 154963661 | 154963662 | rs59519769 | + | A | A/G | single | intron | 4 | 1000GENOMES,HGSV,SSMP,TISHKOFF, | 2 | 0.910009 |
FLAD1 | chr1 | 154963700 | 154963701 | rs12038762 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSAHASNP, | 2 | 0.835321 |
FLAD1 | chr1 | 154963755 | 154963756 | rs58044928 | + | C | C/T | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.950348 |
FLAD1 | chr1 | 154963897 | 154963898 | rs139637379 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.024793 |
FLAD1 | chr1 | 154963945 | 154963946 | rs28851228 | + | A | A/G | single | intron | 7 | 1000GENOMES,ABI,BUSHMAN,HGSV,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.907925 |
FLAD1 | chr1 | 154964025 | 154964026 | rs145051241 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.010101 |
FLAD1 | chr1 | 154964055 | 154964056 | rs57768440 | + | T | C/T | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.049652 |
FLAD1 | chr1 | 154964419 | 154964420 | rs142793055 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.961433 |
FLAD1 | chr1 | 154964433 | 154964434 | rs188714244 | + | T | C/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.010101 |
FLAD1 | chr1 | 154964487 | 154964488 | rs146559430 | + | G | A/G | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.014233 |
FLAD1 | chr1 | 154964573 | 154964574 | rs192843098 | + | G | A/G | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.010560 |
FLAD1 | chr1 | 154964929 | 154964929 | rs34756997 | + | - | -/AGAC/GAC | insertion | intron,near-gene-5,cds-indel | 4 | 1000GENOMES,ABI,BUSHMAN,LUNTER, | 3 | 0.866636 |
FLAD1 | chr1 | 154965112 | 154965113 | rs7535144 | + | G | G/T | single | intron,near-gene-5 | 12 | 1000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.914849 |
FMO3 | chr1 | 171060153 | 171060154 | rs28363520 | + | G | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,EGP_SNPS,TISHKOFF, | 2 | 0.988146 |
FMO3 | chr1 | 171060207 | 171060208 | rs1736561 | + | G | A/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,UWGC,YUSUKE, | 2 | 0.621224 |
FMO3 | chr1 | 171060359 | 171060360 | rs7060320 | + | G | A/G | single | intron | 4 | 1000GENOMES,BCM_SSAHASNP,BL,EGP_SNPS, | 2 | 0.016115 |
FMO3 | chr1 | 171060654 | 171060655 | rs7881612 | + | A | A/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.971251 |
FMO3 | chr1 | 171060732 | 171060732 | rs35525949 | + | - | -/C | insertion | intron | 8 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,DEVINE_LAB,GMI,LUNTER,SSMP, | 2 | 0.394037 |
FMO3 | chr1 | 171060736 | 171060738 | rs201825632 | + | AA | -/AA | deletion | intron | 1 | 1000GENOMES, | 2 | 0.436639 |
FMO3 | chr1 | 171060755 | 171060756 | rs148451696 | + | G | A/G | single | intron | 2 | 1000GENOMES,MPI_MOLGEN, | 2 | 0.018366 |
FMO3 | chr1 | 171060820 | 171060821 | rs7880204 | + | C | C/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.675787 |
FMO3 | chr1 | 171061031 | 171061033 | rs201550260 | + | GC | -/GC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.191460 |
FMO3 | chr1 | 171061032 | 171061033 | rs7880493 | + | C | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.883862 |
FMO3 | chr1 | 171061033 | 171061034 | rs28363522 | + | G | A/G | single | intron | 4 | BUSHMAN,EGP_SNPS,ILLUMINA,TISHKOFF, | 2 | 0.041420 |
FMO3 | chr1 | 171061067 | 171061069 | rs28363523 | + | GT | -/GT | deletion | intron | 1 | EGP_SNPS, | 2 | 0.012048 |
FMO3 | chr1 | 171061157 | 171061158 | rs28363524 | + | C | C/T | single | intron | 4 | 1000GENOMES,EGP_SNPS,ILLUMINA,KRIBB_YJKIM, | 2 | 0.982403 |
FMO3 | chr1 | 171061386 | 171061387 | rs113729962 | + | G | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.126948 |
FMO3 | chr1 | 171061988 | 171061989 | rs4140653 | + | C | C/T | single | intron | 7 | 1000GENOMES,BGI,EGP_SNPS,GMI,HGSV,ILLUMINA,PJP, | 2 | 0.902304 |
FMO3 | chr1 | 171061989 | 171061990 | rs2064074 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.574567 |
FMO3 | chr1 | 171062105 | 171062106 | rs6608462 | + | A | A/C | single | intron | 12 | 1000GENOMES,AFFY,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,TISHKOFF,WI_SSAHASNP, | 2 | 0.967296 |
FMO3 | chr1 | 171062192 | 171062193 | rs16828308 | + | T | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.024329 |
FMO3 | chr1 | 171062193 | 171062194 | rs1736566 | + | A | A/G | single | intron | 10 | 1000GENOMES,EGP_SNPS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.904432 |
FMO3 | chr1 | 171062247 | 171062248 | rs2064075 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.806507 |
FMO3 | chr1 | 171062497 | 171062498 | rs2064076 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.460151 |
FMO3 | chr1 | 171062621 | 171062650 | rs28745579 | + | GTATTCCATGGTGTG | lengthTooLong | in-del | intron | 1 | EGP_SNPS, | 2 | 0.045454 |
FMO3 | chr1 | 171062650 | 171062651 | rs28745580 | + | C | C/T | single | intron | 1 | EGP_SNPS, | 2 | 0.953488 |
FMO3 | chr1 | 171062666 | 171062667 | rs28745581 | + | C | C/T | single | intron | 5 | 1000GENOMES,BGI,EGP_SNPS,GMI,SSMP, | 2 | 0.894511 |
FMO3 | chr1 | 171062891 | 171062892 | rs1795248 | + | T | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.616963 |
FMO3 | chr1 | 171062995 | 171062996 | rs12732215 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,SSAHASNP, | 2 | 0.317017 |
FMO3 | chr1 | 171062997 | 171062998 | rs115005124 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.874674 |
FMO3 | chr1 | 171063027 | 171063028 | rs7886526 | + | G | G/T | single | intron | 10 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.538813 |
FMO3 | chr1 | 171063166 | 171063167 | rs141433827 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.043159 |
FMO3 | chr1 | 171063261 | 171063262 | rs12059956 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.359909 |
FMO3 | chr1 | 171063522 | 171063523 | rs28745582 | + | T | C/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.018190 |
FMO3 | chr1 | 171063550 | 171063551 | rs28745584 | + | A | A/T | single | intron | 6 | 1000GENOMES,BGI,EGP_SNPS,GMI,SSMP,TISHKOFF, | 2 | 0.863790 |
FMO3 | chr1 | 171063589 | 171063590 | rs28745585 | + | C | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,SSMP,TISHKOFF, | 2 | 0.871199 |
FMO3 | chr1 | 171063685 | 171063686 | rs28745586 | + | A | A/G | single | intron | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.877327 |
FMO3 | chr1 | 171063792 | 171063793 | rs28745588 | + | G | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,EGP_SNPS,GMI,SSMP,TISHKOFF, | 2 | 0.127434 |
FMO3 | chr1 | 171063801 | 171063802 | rs28745589 | + | T | C/T | single | intron | 3 | 1000GENOMES,EGP_SNPS,TISHKOFF, | 2 | 0.030085 |
FMO3 | chr1 | 171064005 | 171064007 | rs28745591 | + | GT | -/GT | deletion | intron | 6 | 1000GENOMES,EGP_SNPS,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.127219 |
FMO3 | chr1 | 171064224 | 171064225 | rs28363526 | + | T | C/T | single | intron | 2 | 1000GENOMES,EGP_SNPS, | 2 | 0.025359 |
FMO3 | chr1 | 171064703 | 171064704 | rs28363527 | + | A | A/G | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,SSMP, | 2 | 0.778199 |
FMO3 | chr1 | 171064873 | 171064873 | rs200656733 | + | - | -/TA | insertion | intron | 1 | 1000GENOMES, | 2 | 0.877870 |
FMO3 | chr1 | 171064882 | 171064883 | rs190685191 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.109275 |
FMO3 | chr1 | 171064886 | 171064886 | rs200715887 | + | - | -/ATGA | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.895776 |
FMO3 | chr1 | 171064905 | 171064906 | rs183483206 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.029844 |
FMO3 | chr1 | 171064924 | 171064925 | rs188968306 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.974288 |
FMO3 | chr1 | 171064980 | 171064981 | rs193242440 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.943526 |
FMO3 | chr1 | 171065002 | 171065003 | rs182699086 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.033058 |
FMO3 | chr1 | 171065015 | 171065016 | rs186573324 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.939853 |
FMO3 | chr1 | 171065078 | 171065079 | rs191157225 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.100551 |
FMO3 | chr1 | 171065119 | 171065120 | rs184045854 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.105142 |
FMO3 | chr1 | 171065181 | 171065182 | rs188383573 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.063361 |
FMO3 | chr1 | 171065270 | 171065271 | rs192907268 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.751607 |
FMO3 | chr1 | 171065291 | 171065292 | rs185266583 | + | G | G/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.595960 |
FMO3 | chr1 | 171065357 | 171065358 | rs190527685 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.090450 |
FMO3 | chr1 | 171065386 | 171065387 | rs182299466 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.857208 |
FMO3 | chr1 | 171065517 | 171065519 | rs202101794 | + | TA | -/TA | deletion | intron | 1 | 1000GENOMES, | 2 | 0.152893 |
FMO3 | chr1 | 171065566 | 171065567 | rs186348903 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.943526 |
FMO3 | chr1 | 171065576 | 171065577 | rs188347521 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.918733 |
FMO3 | chr1 | 171065616 | 171065617 | rs180710733 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.052801 |
FMO3 | chr1 | 171065686 | 171065687 | rs185723654 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.093205 |
FMO3 | chr1 | 171065707 | 171065708 | rs191417044 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.953168 |
FMO3 | chr1 | 171065711 | 171065712 | rs11580161 | + | C | A/C | single | intron | 4 | 1000GENOMES,CSHL-HAPMAP,PJP,SSMP, | 2 | 0.236239 |
FMO3 | chr1 | 171065711 | 171065713 | rs200360778 | + | CT | -/CT | deletion | intron | 1 | 1000GENOMES, | 2 | 0.039945 |
FMO3 | chr1 | 171065732 | 171065733 | rs186894091 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.841598 |
FMO3 | chr1 | 171065770 | 171065771 | rs192045829 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.956841 |
FMO3 | chr1 | 171065810 | 171065811 | rs183348524 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.896694 |
FMO3 | chr1 | 171065813 | 171065814 | rs187603784 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.040404 |
FMO3 | chr1 | 171065940 | 171065941 | rs11578651 | + | G | G/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.066271 |
FMO3 | chr1 | 171066022 | 171066023 | rs182050121 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986226 |
FMO3 | chr1 | 171066087 | 171066088 | rs77873435 | + | C | A/C/T | single | intron | 4 | 1000GENOMES,ENSEMBL,GMI,PJP, | 2 | 0.216117 |
FMO3 | chr1 | 171066091 | 171066092 | rs192885261 | + | C | C/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.904959 |
FMO3 | chr1 | 171066105 | 171066106 | rs78245463 | + | A | A/G | single | intron | 5 | 1000GENOMES,ENSEMBL,GMI,PJP,SSMP, | 2 | 0.569139 |
FMO3 | chr1 | 171067007 | 171067008 | rs28866833 | + | G | A/G | single | intron | 6 | ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,SSAHASNP,SSMP, | 2 | 0.400000 |
FMO3 | chr1 | 171067726 | 171067727 | rs138733362 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,PJP,SSMP, | 2 | 0.326446 |
FMO3 | chr1 | 171067840 | 171067841 | rs12074485 | + | T | C/T | single | intron | 2 | 1000GENOMES,SC_SNP, | 2 | 0.034894 |
FMO3 | chr1 | 171068185 | 171068186 | rs2204790 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.823422 |
FMO3 | chr1 | 171068190 | 171068191 | rs2204791 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.654163 |
FMO3 | chr1 | 171068248 | 171068249 | rs2205725 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.654022 |
FMO3 | chr1 | 171068249 | 171068250 | rs1795239 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCM_SSAHASNP,GMI,HGSV,SC_JCM,SEQUENOM,SSMP,TISHKOFF, | 2 | 0.094867 |
FMO3 | chr1 | 171068751 | 171068756 | rs201557815 | + | AAAAG | -/AAAAG | deletion | intron | 1 | 1000GENOMES, | 2 | 0.012856 |
FMO3 | chr1 | 171068843 | 171068844 | rs114446469 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.024826 |
FMO3 | chr1 | 171068881 | 171068882 | rs67727346 | + | C | C/T | single | intron,near-gene-5 | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,TISHKOFF, | 2 | 0.478738 |
FMO3 | chr1 | 171069028 | 171069029 | rs28363528 | + | G | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,EGP_SNPS,GMI,SSMP, | 2 | 0.124681 |
FMO3 | chr1 | 171069087 | 171069088 | rs28363530 | + | G | A/G | single | intron,near-gene-5 | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,GMI,SSMP,TISHKOFF, | 2 | 0.126904 |
FMO3 | chr1 | 171069156 | 171069157 | rs1920137 | + | A | A/C | single | intron,near-gene-5 | 13 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.542194 |
FMO3 | chr1 | 171069958 | 171069959 | rs12076145 | + | A | A/G | single | intron,near-gene-5 | 14 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.523667 |
FMO3 | chr1 | 171069981 | 171069982 | rs74602385 | + | A | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.987144 |