Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
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NDUFV1 | chr11 | 67378837 | 67378838 | rs2306144 | + | C | A/C/G | single | intron | 5 | 1000GENOMES,NHLBI-ESP,RIKENSNPRC,SSMP,YUSUKE, | 2 | 0.957354 |
NDUFV1 | chr11 | 67379078 | 67379079 | rs112015076 | + | G | C/G | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.013761 |
NDUFV1 | chr11 | 67379574 | 67379575 | rs12295232 | + | G | A/G | single | intron,near-gene-5 | 6 | 1000GENOMES,BUSHMAN,ILLUMINA,KRIBB_YJKIM,SC_SNP,TISHKOFF, | 2 | 0.052808 |
NDUFV1 | chr11 | 67379762 | 67379763 | rs4148958 | + | G | A/G | single | intron,near-gene-5 | 5 | 1000GENOMES,BGI,GMI,RIKENSNPRC,SSMP, | 2 | 0.010393 |
ACADS | chr12 | 121164489 | 121164490 | rs11065229 | + | C | A/C | single | intron | 9 | 1000GENOMES,AFFY,BGI,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP, | 2 | 0.082822 |
ACADS | chr12 | 121164651 | 121164652 | rs11065230 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,IMCJ-GDT,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.873597 |
ACADS | chr12 | 121165317 | 121165318 | rs77596870 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP, | 2 | 0.022477 |
ACADS | chr12 | 121165812 | 121165813 | rs148642194 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987144 |
ACADS | chr12 | 121166162 | 121166163 | rs61239175 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.953438 |
ACADS | chr12 | 121166454 | 121166455 | rs61624288 | + | G | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.029331 |
ACADS | chr12 | 121167038 | 121167039 | rs7978125 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.475193 |
ACADS | chr12 | 121167195 | 121167196 | rs12425598 | + | T | C/T | single | intron | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL, | 2 | 0.023853 |
ACADS | chr12 | 121167386 | 121167387 | rs3999408 | - | C | A/G | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.198471 |
ACADS | chr12 | 121167743 | 121167744 | rs10849781 | + | C | A/C | single | intron | 10 | 1000GENOMES,AFFY,BGI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP, | 2 | 0.088599 |
ACADS | chr12 | 121168030 | 121168031 | rs111999968 | + | G | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SSMP, | 2 | 0.034404 |
ACADS | chr12 | 121168072 | 121168073 | rs3794216 | - | C | C/G | single | intron | 3 | 1000GENOMES,SSMP,YUSUKE, | 2 | 0.022039 |
ACADS | chr12 | 121168082 | 121168083 | rs3794215 | - | T | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.468582 |
ACADS | chr12 | 121168244 | 121168245 | rs3794214 | - | T | A/G | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.448314 |
ACADS | chr12 | 121168570 | 121168571 | rs150146692 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989899 |
ACADS | chr12 | 121168602 | 121168602 | rs3838807 | - | - | -/CA | insertion | intron | 7 | 1000GENOMES,ABI,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,YUSUKE, | 2 | 0.388430 |
ACADS | chr12 | 121168603 | 121168603 | rs63009860 | + | - | -/GC/GT/TG | insertion | intron | 6 | 1000GENOMES,DEVINE_LAB,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.412844 |
ACADS | chr12 | 121168616 | 121168617 | rs75148250 | + | T | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.010453 |
ACADS | chr12 | 121169355 | 121169356 | rs11065231 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SSMP, | 2 | 0.520567 |
ACADS | chr12 | 121169435 | 121169436 | rs696339 | - | A | A/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_SNP,SSAHASNP,SSMP, | 2 | 0.598627 |
ACADS | chr12 | 121170094 | 121170095 | rs11065232 | + | C | A/C | single | intron | 3 | 1000GENOMES,SC_SNP,SSMP, | 2 | 0.127181 |
ACADS | chr12 | 121170256 | 121170257 | rs34346357 | + | T | C/T | single | intron | 6 | 1000GENOMES,ABI,HGSV,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.369266 |
ACADS | chr12 | 121170271 | 121170272 | rs11065233 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP, | 2 | 0.485780 |
ACADS | chr12 | 121170338 | 121170339 | rs34491494 | + | C | C/T | single | intron | 7 | 1000GENOMES,ABI,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.604950 |
ACADS | chr12 | 121170345 | 121170346 | rs148589034 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.027089 |
ACADS | chr12 | 121170637 | 121170638 | rs190188111 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.952250 |
ACADS | chr12 | 121171036 | 121171037 | rs113979967 | + | G | G/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,TISHKOFF, | 2 | 0.974794 |
ACADS | chr12 | 121171059 | 121171060 | rs11065234 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SC_SNP, | 2 | 0.077594 |
ACADS | chr12 | 121171236 | 121171237 | rs708781 | - | G | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,KWOK,TSC-CSHL, | 2 | 0.979835 |
ACADS | chr12 | 121171338 | 121171353 | rs67132258 | + | TGCCTGCTGAAATGG | lengthTooLong | in-del | intron,cds-indel | 3 | 1000GENOMES,DEVINE_LAB,LUNTER, | 2 | 0.612489 |
ACADS | chr12 | 121171802 | 121171803 | rs558314 | - | C | C/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.732453 |
ACADS | chr12 | 121171887 | 121171888 | rs12368617 | + | G | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA,SC_SNP,SSMP, | 2 | 0.013761 |
ACADS | chr12 | 121171890 | 121171891 | rs34673751 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF, | 2 | 0.184355 |
ACADS | chr12 | 121172222 | 121172223 | rs7957395 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,WI_SSAHASNP, | 2 | 0.010889 |
ACADS | chr12 | 121172265 | 121172266 | rs11065235 | + | C | C/T | single | intron | 8 | 1000GENOMES,AFFY,BGI,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP, | 2 | 0.915943 |
ACADS | chr12 | 121172921 | 121172922 | rs148270270 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972911 |
ACADS | chr12 | 121173030 | 121173031 | rs7312316 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,ENSEMBL,GMI,SSMP, | 2 | 0.538038 |
ACADS | chr12 | 121173100 | 121173104 | rs144390141 | + | AAAC | -/AAAC | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.122590 |
ACADS | chr12 | 121173162 | 121173162 | rs201595000 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.926997 |
ACADS | chr12 | 121173385 | 121173386 | rs56232241 | + | T | C/T | single | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,HGSV,TISHKOFF, | 2 | 0.033507 |
ACADS | chr12 | 121173430 | 121173431 | rs575437 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.551598 |
ACADS | chr12 | 121173652 | 121173653 | rs696340 | + | A | A/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.526916 |
ACADS | chr12 | 121173751 | 121173752 | rs80005880 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.945557 |
ACADS | chr12 | 121173798 | 121173816 | rs201057576 | + | TCCCTGTCCCCGTCC | -/TCCCTGTCCCCGT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.021579 |
ACADS | chr12 | 121173809 | 121173815 | rs146046379 | + | GTCCCT | -/GTCCCT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.047750 |
ACADS | chr12 | 121173827 | 121173833 | rs200960176 | + | GTCCCT | -/GTCCCT | deletion | intron | 1 | 1000GENOMES, | 2 | 0.021579 |
ACADS | chr12 | 121173931 | 121173932 | rs708783 | + | A | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP, | 2 | 0.384369 |
ACADS | chr12 | 121173973 | 121173973 | rs59063082 | + | - | -/G | insertion | intron | 8 | 1000GENOMES,BILGI_BIOE,BUSHMAN,GMI,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.734404 |
ACADS | chr12 | 121174312 | 121174313 | rs115132997 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.961237 |
ACADS | chr12 | 121174764 | 121174765 | rs112669327 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.972477 |
ACADS | chr12 | 121175484 | 121175485 | rs2239687 | + | C | A/C | single | intron | 5 | 1000GENOMES,GMI,SC_SNP,SSMP,YUSUKE, | 2 | 0.084856 |
ACADS | chr12 | 121175490 | 121175491 | rs12231499 | + | T | G/T | single | intron | 5 | 1000GENOMES,GMI,IMCJ-GDT,SC_SNP,SSMP, | 2 | 0.077452 |
ACADS | chr12 | 121175523 | 121175524 | rs2014355 | + | T | C/T | single | intron | 13 | 1000GENOMES,ABI,AFFY,BGI,BUSHMAN,EXOME_CHIP,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.164092 |
ACADS | chr12 | 121175559 | 121175560 | rs695950 | - | G | C/G | single | intron | 16 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.778677 |
ACADS | chr12 | 121175561 | 121175562 | rs117636828 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.023064 |
ACADS | chr12 | 121175609 | 121175610 | rs117000908 | + | G | A/G | single | intron | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.021035 |
ACADS | chr12 | 121175983 | 121175984 | rs555404 | + | T | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.567517 |
ACADS | chr12 | 121176292 | 121176293 | rs17848090 | + | C | C/T | single | intron | 6 | 1000GENOMES,BGI,CLINSEQ_SNP,IMCJ-GDT,NHLBI-ESP,SSMP, | 2 | 0.934360 |
ACADS | chr12 | 121176548 | 121176549 | rs487915 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,IMCJ-GDT,KWOK,SC_JCM,SSMP,YUSUKE, | 2 | 0.916209 |
ACADS | chr12 | 121176769 | 121176770 | rs2071266 | + | C | C/T | single | intron | 8 | 1000GENOMES,BGI,GMI,HGBASE,IMCJ-GDT,NHLBI-ESP,SSMP,YUSUKE, | 2 | 0.922936 |
ACADS | chr12 | 121176803 | 121176803 | rs57852948 | + | - | -/C | insertion | intron | 8 | 1000GENOMES,DEVINE_LAB,GMI,HGSV,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.882461 |
ACADS | chr12 | 121176901 | 121176902 | rs140372512 | + | G | A/G | single | intron | 5 | 1000GENOMES,CLINSEQ_SNP,NHLBI-ESP,SSMP,WARNICH_LAB, | 2 | 0.015353 |
COQ6 | chr14 | 74416664 | 74416665 | rs17094157 | + | T | C/T | single | intron,near-gene-5,untranslated-5 | 9 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,KYUGEN,NHLBI-ESP,PERLEGEN,SSMP, | 3 | 0.084197 |
COQ6 | chr14 | 74416936 | 74416937 | rs17094164 | + | G | C/G | single | intron,near-gene-5,untranslated-5 | 3 | 1000GENOMES,PERLEGEN,TISHKOFF, | 2 | 0.013603 |
COQ6 | chr14 | 74416944 | 74416945 | rs17552038 | + | G | C/G | single | intron,near-gene-5,untranslated-5 | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KYUGEN,PJP,SI_EXO,SSMP, | 2 | 0.107045 |
COQ6 | chr14 | 74416995 | 74416996 | rs78801603 | + | G | G/T | single | intron,untranslated-5 | 3 | 1000GENOMES,ILLUMINA,NHLBI-ESP, | 2 | 0.972561 |
COQ6 | chr14 | 74417208 | 74417209 | rs60369619 | + | C | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,BUSHMAN,HGSV,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.984876 |
COQ6 | chr14 | 74417487 | 74417488 | rs76260393 | + | T | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016986 |
COQ6 | chr14 | 74417554 | 74417555 | rs112218167 | + | T | G/T | single | intron,near-gene-5 | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.051376 |
COQ6 | chr14 | 74417597 | 74417598 | rs11850082 | + | C | A/C | single | intron,near-gene-5 | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL, | 2 | 0.014207 |
COQ6 | chr14 | 74417608 | 74417609 | rs59892091 | + | T | C/T | single | intron,near-gene-5 | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.090157 |
COQ6 | chr14 | 74417649 | 74417650 | rs11850094 | + | C | C/T | single | intron,near-gene-5 | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL, | 2 | 0.979167 |
COQ6 | chr14 | 74417711 | 74417712 | rs11850097 | + | A | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL, | 2 | 0.988543 |
COQ6 | chr14 | 74417797 | 74417798 | rs8013496 | + | G | C/G | single | intron,near-gene-5 | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.363969 |
COQ6 | chr14 | 74417912 | 74417913 | rs112260439 | + | G | G/T | single | intron,near-gene-5 | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.985780 |
COQ6 | chr14 | 74418065 | 74418066 | rs114383382 | + | G | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013937 |
COQ6 | chr14 | 74418140 | 74418141 | rs11628276 | + | G | A/G | single | intron,near-gene-5 | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.248856 |
COQ6 | chr14 | 74418587 | 74418588 | rs66712197 | + | G | A/G | single | intron,near-gene-5 | 8 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.105769 |
COQ6 | chr14 | 74418749 | 74418750 | rs72723772 | + | T | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.021120 |
COQ6 | chr14 | 74418969 | 74418970 | rs77680522 | + | C | C/T | single | intron,near-gene-5 | 5 | 1000GENOMES,BGI,GMI,SSMP,TISHKOFF, | 2 | 0.859045 |
COQ6 | chr14 | 74419190 | 74419191 | rs10459544 | + | C | C/G | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.164765 |
COQ6 | chr14 | 74419208 | 74419209 | rs10459545 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.339100 |
COQ6 | chr14 | 74419245 | 74419246 | rs191928320 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989440 |
COQ6 | chr14 | 74419246 | 74419247 | rs10459546 | + | A | A/T | single | intron | 10 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSMP, | 2 | 0.881410 |
COQ6 | chr14 | 74419354 | 74419355 | rs111553135 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.968349 |
COQ6 | chr14 | 74419526 | 74419527 | rs141219050 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986226 |
COQ6 | chr14 | 74419641 | 74419642 | rs10459547 | + | G | G/T | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP, | 2 | 0.892955 |
COQ6 | chr14 | 74419824 | 74419825 | rs4903159 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.659893 |
COQ6 | chr14 | 74420029 | 74420030 | rs112742205 | + | T | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA, | 2 | 0.018807 |
COQ6 | chr14 | 74420108 | 74420109 | rs60157646 | + | T | G/T | single | intron | 8 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,TISHKOFF, | 2 | 0.022334 |
COQ6 | chr14 | 74420126 | 74420127 | rs3213692 | - | C | A/G | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BGI,CLINSEQ_SNP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,NHLBI-ESP,PJP,SSAHASNP,SSMP,YUSUKE, | 2 | 0.238280 |
COQ6 | chr14 | 74420126 | 74420127 | rs200558787 | + | C | -/C | deletion | intron | 1 | 1000GENOMES, | 2 | 0.216253 |
COQ6 | chr14 | 74420439 | 74420440 | rs17094182 | + | C | A/C | single | intron | 9 | 1000GENOMES,AFFY,BGI,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.161667 |
COQ6 | chr14 | 74420524 | 74420527 | rs143983947 | + | TGT | -/TGT | deletion | intron | 4 | 1000GENOMES,BL,GMI,LUNTER, | 2 | 0.050046 |
COQ6 | chr14 | 74420620 | 74420620 | rs146800451 | + | - | -/AG | insertion | intron | 3 | 1000GENOMES,GMI,LUNTER, | 2 | 0.915519 |
COQ6 | chr14 | 74420921 | 74420922 | rs11629101 | + | T | C/T | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,SSMP,TISHKOFF, | 2 | 0.342159 |
COQ6 | chr14 | 74421149 | 74421152 | rs200188951 | + | AAC | -/AAC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.013774 |
COQ6 | chr14 | 74421211 | 74421212 | rs2079632 | - | C | C/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.873028 |
COQ6 | chr14 | 74421320 | 74421321 | rs2098030 | - | C | A/G | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,ENSEMBL,SC_JCM,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.103022 |
COQ6 | chr14 | 74421375 | 74421376 | rs140936556 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.013774 |
COQ6 | chr14 | 74421411 | 74421412 | rs117895742 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.977372 |
COQ6 | chr14 | 74421532 | 74421533 | rs150260008 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.769054 |
COQ6 | chr14 | 74421541 | 74421542 | rs139022996 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.328283 |
COQ6 | chr14 | 74421565 | 74421566 | rs191731397 | + | T | A/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.248852 |
COQ6 | chr14 | 74421565 | 74421566 | rs201876533 | + | T | -/T | deletion | intron | 1 | 1000GENOMES, | 2 | 0.241506 |
COQ6 | chr14 | 74421625 | 74421626 | rs115919509 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.970819 |
COQ6 | chr14 | 74421646 | 74421647 | rs113358234 | + | T | A/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI, | 2 | 0.351971 |
COQ6 | chr14 | 74421661 | 74421662 | rs188075790 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.046373 |
COQ6 | chr14 | 74421680 | 74421681 | rs189541577 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.970156 |
COQ6 | chr14 | 74422328 | 74422329 | rs2302118 | - | G | C/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.812666 |
COQ6 | chr14 | 74422385 | 74422386 | rs75531541 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.980418 |
COQ6 | chr14 | 74422801 | 74422802 | rs188395141 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.977043 |
COQ6 | chr14 | 74422802 | 74422803 | rs112488013 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.025618 |
COQ6 | chr14 | 74422842 | 74422843 | rs1972538 | - | T | A/G | single | intron | 10 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.778185 |
COQ6 | chr14 | 74422853 | 74422854 | rs113608012 | + | T | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SSMP, | 2 | 0.011009 |
COQ6 | chr14 | 74422903 | 74422904 | rs112175736 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.018781 |
COQ6 | chr14 | 74422922 | 74422923 | rs1985969 | - | T | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.526484 |
COQ6 | chr14 | 74423217 | 74423218 | rs10148057 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,WI_SSAHASNP, | 2 | 0.983821 |
COQ6 | chr14 | 74423356 | 74423363 | rs143222231 | + | TCCACTT | -/TCCACTT | deletion | intron | 4 | 1000GENOMES,GMI,LUNTER,PJP, | 2 | 0.327365 |
COQ6 | chr14 | 74423517 | 74423518 | rs75446133 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986498 |
COQ6 | chr14 | 74423658 | 74423659 | rs11623965 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,SSMP, | 2 | 0.235133 |
COQ6 | chr14 | 74423781 | 74423782 | rs11850995 | + | C | C/T | single | intron | 7 | 1000GENOMES,ABI,AFFY,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM, | 2 | 0.977887 |
COQ6 | chr14 | 74423800 | 74423801 | rs181739324 | + | A | A/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.943526 |
COQ6 | chr14 | 74423803 | 74423804 | rs4903160 | + | A | A/T | single | intron | 5 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL,GMI,WI_SSAHASNP, | 2 | 0.719523 |
COQ6 | chr14 | 74423803 | 74423804 | rs200787774 | + | A | -/A | deletion | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.280533 |
COQ6 | chr14 | 74423805 | 74423805 | rs201739413 | + | - | -/TA | insertion | intron | 1 | 1000GENOMES, | 2 | 0.797521 |
COQ6 | chr14 | 74423806 | 74423806 | rs199572425 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,GMI, | 2 | 0.797980 |
COQ6 | chr14 | 74423836 | 74423837 | rs60611458 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.022477 |
COQ6 | chr14 | 74423955 | 74423956 | rs62006130 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.318515 |
COQ6 | chr14 | 74424201 | 74424202 | rs77803340 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029617 |
COQ6 | chr14 | 74424258 | 74424259 | rs114800916 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984756 |
COQ6 | chr14 | 74424264 | 74424265 | rs62006131 | + | T | A/C/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.345995 |
COQ6 | chr14 | 74424490 | 74424491 | rs17782310 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.222653 |
COQ6 | chr14 | 74424543 | 74424544 | rs79537722 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014373 |
COQ6 | chr14 | 74424740 | 74424741 | rs10151933 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,WI_SSAHASNP, | 2 | 0.012722 |
COQ6 | chr14 | 74425055 | 74425056 | rs3764859 | - | C | G/T | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SI_EXO,SSMP,TISHKOFF,YUSUKE, | 2 | 0.679628 |
COQ6 | chr14 | 74426313 | 74426314 | rs57268226 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.985192 |
COQ6 | chr14 | 74426374 | 74426375 | rs145747095 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.914141 |
COQ6 | chr14 | 74426671 | 74426672 | rs2072291 | - | C | A/G | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.614831 |
COQ6 | chr14 | 74426853 | 74426854 | rs740505 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.139264 |
COQ6 | chr14 | 74426929 | 74426930 | rs740504 | + | A | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.856322 |
COQ6 | chr14 | 74426941 | 74426942 | rs10873263 | + | A | A/C | single | intron | 11 | 1000GENOMES,ABI,AFFY,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.808896 |
COQ6 | chr14 | 74426970 | 74426971 | rs34468446 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.879689 |
COQ6 | chr14 | 74427404 | 74427405 | rs2098029 | - | C | A/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TSC-CSHL, | 2 | 0.090577 |
COQ6 | chr14 | 74427405 | 74427406 | rs115579294 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.010889 |
COQ6 | chr14 | 74427624 | 74427625 | rs75088275 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.015244 |
COQ6 | chr14 | 74427673 | 74427674 | rs79246780 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.974325 |
COQ6 | chr14 | 74428285 | 74428286 | rs7141392 | + | A | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.145259 |
COQ6 | chr14 | 74428337 | 74428338 | rs116737018 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984756 |
COQ6 | chr14 | 74428850 | 74428851 | rs12880050 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.899360 |
COQ6 | chr14 | 74429090 | 74429091 | rs72627141 | + | T | C/T | single | intron | 6 | 1000GENOMES,BGI,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.153391 |
COQ6 | chr14 | 74429124 | 74429125 | rs113145643 | + | G | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.022018 |
COQ6 | chr14 | 74429132 | 74429133 | rs7147088 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.653705 |
COQ6 | chr14 | 74429136 | 74429137 | rs7147229 | + | C | C/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.765811 |
COQ6 | chr14 | 74429409 | 74429411 | rs57794133 | + | TA | -/TA | deletion | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.614011 |
COQ6 | chr14 | 74429412 | 74429413 | rs200726437 | + | A | -/A | deletion | intron | 1 | 1000GENOMES, | 2 | 0.271809 |
L2HGDH | chr14 | 50714128 | 50714129 | rs17122318 | + | A | A/G | single | intron | 3 | 1000GENOMES,PERLEGEN,TISHKOFF, | 2 | 0.969298 |
L2HGDH | chr14 | 50714180 | 50714181 | rs143645778 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.988062 |
L2HGDH | chr14 | 50714193 | 50714194 | rs737077 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.673541 |
L2HGDH | chr14 | 50714273 | 50714274 | rs737078 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.456721 |
L2HGDH | chr14 | 50714331 | 50714332 | rs737079 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PJP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.328963 |
L2HGDH | chr14 | 50714711 | 50714712 | rs761817 | + | T | C/T | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.908801 |
L2HGDH | chr14 | 50714984 | 50714985 | rs743075 | - | T | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.451149 |
L2HGDH | chr14 | 50714992 | 50714993 | rs79961648 | + | A | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.963415 |
L2HGDH | chr14 | 50715218 | 50715219 | rs743076 | + | A | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.714386 |
L2HGDH | chr14 | 50715274 | 50715275 | rs74699989 | + | C | A/C | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.010453 |
L2HGDH | chr14 | 50715563 | 50715564 | rs7155191 | + | T | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.330137 |
L2HGDH | chr14 | 50715641 | 50715642 | rs10136539 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.688563 |
L2HGDH | chr14 | 50715861 | 50715862 | rs2092897 | + | T | C/T | single | intron | 5 | ABI,ILLUMINA,KRIBB_YJKIM,SC_JCM,TSC-CSHL, | 2 | 0.422053 |
L2HGDH | chr14 | 50716265 | 50716266 | rs67871518 | + | C | C/T | single | intron | 7 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.674908 |
L2HGDH | chr14 | 50716287 | 50716288 | rs66726816 | + | C | C/T | single | intron | 7 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.674908 |
L2HGDH | chr14 | 50716577 | 50716578 | rs73275103 | + | C | C/T | single | intron | 8 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.725149 |
L2HGDH | chr14 | 50716649 | 50716650 | rs61982731 | + | C | C/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.747021 |
L2HGDH | chr14 | 50717393 | 50717394 | rs80343828 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
L2HGDH | chr14 | 50717447 | 50717448 | rs4901002 | + | G | C/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.583090 |
L2HGDH | chr14 | 50718720 | 50718721 | rs57075287 | + | T | C/T | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.036150 |
L2HGDH | chr14 | 50719001 | 50719002 | rs11628216 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.128545 |
L2HGDH | chr14 | 50719074 | 50719075 | rs140009986 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.979798 |
L2HGDH | chr14 | 50719213 | 50719214 | rs76691238 | + | A | -/A | deletion | intron | 6 | 1000GENOMES,BGI,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.320478 |
L2HGDH | chr14 | 50719259 | 50719260 | rs11628296 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.741112 |
L2HGDH | chr14 | 50719614 | 50719615 | rs10149715 | + | G | A/G | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.332310 |
L2HGDH | chr14 | 50719827 | 50719828 | rs12893979 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.742216 |
L2HGDH | chr14 | 50720061 | 50720062 | rs7152434 | + | T | A/T | single | intron | 8 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.331044 |
L2HGDH | chr14 | 50720204 | 50720205 | rs7151353 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.091158 |
L2HGDH | chr14 | 50720284 | 50720285 | rs7151371 | + | A | A/C | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.050459 |
L2HGDH | chr14 | 50720294 | 50720295 | rs114504167 | + | C | A/C | single | intron | 5 | 1000GENOMES,BL,GMI,SSMP,TISHKOFF, | 2 | 0.263013 |
L2HGDH | chr14 | 50720911 | 50720912 | rs12890974 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.260385 |
L2HGDH | chr14 | 50721265 | 50721266 | rs56075103 | + | A | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA,SSMP, | 2 | 0.976066 |
L2HGDH | chr14 | 50721596 | 50721596 | rs201706273 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.968320 |
L2HGDH | chr14 | 50721693 | 50721694 | rs76152450 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.034843 |
L2HGDH | chr14 | 50721946 | 50721947 | rs56357220 | + | A | A/G | single | intron | 3 | 1000GENOMES,HGSV,ILLUMINA-UK, | 2 | 0.988991 |
L2HGDH | chr14 | 50722009 | 50722010 | rs72683914 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.874771 |
L2HGDH | chr14 | 50722150 | 50722151 | rs144943179 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.014233 |
L2HGDH | chr14 | 50722358 | 50722359 | rs8004803 | + | A | A/C | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.447311 |
L2HGDH | chr14 | 50722663 | 50722664 | rs2013330 | + | T | C/T | single | intron | 6 | 1000GENOMES,GMI,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.299007 |
L2HGDH | chr14 | 50722691 | 50722692 | rs61553770 | + | G | C/G | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.010560 |
L2HGDH | chr14 | 50722853 | 50722854 | rs79624057 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.988240 |
L2HGDH | chr14 | 50722937 | 50722938 | rs141938219 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
L2HGDH | chr14 | 50723284 | 50723285 | rs910640 | + | T | A/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.870776 |
L2HGDH | chr14 | 50723285 | 50723285 | rs201497484 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.328283 |
L2HGDH | chr14 | 50723630 | 50723631 | rs4901004 | + | T | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.125000 |
L2HGDH | chr14 | 50723959 | 50723960 | rs910641 | + | T | C/T | single | intron | 23 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.862675 |
L2HGDH | chr14 | 50724337 | 50724338 | rs2007750 | + | G | C/G | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.910210 |
L2HGDH | chr14 | 50724572 | 50724573 | rs77076798 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.974739 |
L2HGDH | chr14 | 50725085 | 50725086 | rs10151271 | + | A | A/T | single | intron | 11 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.666362 |
L2HGDH | chr14 | 50725772 | 50725773 | rs10151883 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.121923 |
L2HGDH | chr14 | 50725979 | 50725980 | rs76712673 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
L2HGDH | chr14 | 50726076 | 50726076 | rs201690350 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.625803 |
L2HGDH | chr14 | 50726218 | 50726219 | rs112396161 | + | C | C/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.983028 |
L2HGDH | chr14 | 50726234 | 50726235 | rs28785597 | + | G | A/G | single | intron | 8 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SSAHASNP,SSMP, | 2 | 0.329821 |
L2HGDH | chr14 | 50726278 | 50726279 | rs150919319 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010560 |
L2HGDH | chr14 | 50726303 | 50726304 | rs11849315 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.542218 |
L2HGDH | chr14 | 50726390 | 50726391 | rs112494721 | + | G | -/G | deletion | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.447248 |
L2HGDH | chr14 | 50726392 | 50726393 | rs10132003 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.875856 |
L2HGDH | chr14 | 50726508 | 50726509 | rs145523936 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
L2HGDH | chr14 | 50726547 | 50726548 | rs201522974 | + | A | -/A | deletion | intron | 1 | 1000GENOMES, | 2 | 0.028007 |
L2HGDH | chr14 | 50726727 | 50726731 | rs201533838 | + | AGAT | -/AGAT | deletion | intron | 1 | 1000GENOMES, | 2 | 0.028467 |
L2HGDH | chr14 | 50726971 | 50726972 | rs75481167 | + | C | C/T | single | intron | 7 | 1000GENOMES,BGI,BL,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.778899 |
L2HGDH | chr14 | 50727009 | 50727010 | rs8013289 | + | G | C/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.595479 |
L2HGDH | chr14 | 50727108 | 50727109 | rs8013174 | + | C | C/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.419740 |
L2HGDH | chr14 | 50727193 | 50727194 | rs8013339 | + | C | A/C | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.721099 |
L2HGDH | chr14 | 50727218 | 50727219 | rs11157732 | + | A | A/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.461598 |
L2HGDH | chr14 | 50727227 | 50727228 | rs8013220 | + | A | A/G | single | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.948606 |
L2HGDH | chr14 | 50727242 | 50727243 | rs115765480 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.014373 |
L2HGDH | chr14 | 50727251 | 50727252 | rs8013641 | + | G | A/G | single | intron | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.010017 |
L2HGDH | chr14 | 50727348 | 50727349 | rs76507241 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.014808 |
L2HGDH | chr14 | 50727482 | 50727483 | rs10873033 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.500455 |
L2HGDH | chr14 | 50727522 | 50727523 | rs11157733 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.217749 |
L2HGDH | chr14 | 50728604 | 50728605 | rs76342915 | + | A | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.962544 |
L2HGDH | chr14 | 50728735 | 50728736 | rs4901005 | + | A | A/C | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.411070 |
L2HGDH | chr14 | 50729132 | 50729133 | rs4901006 | + | C | C/T | single | intron | 8 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.783883 |
L2HGDH | chr14 | 50729249 | 50729250 | rs4901007 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.522553 |
L2HGDH | chr14 | 50729397 | 50729398 | rs8004516 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.277842 |
L2HGDH | chr14 | 50729424 | 50729425 | rs8004684 | + | C | C/T | single | intron | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.940113 |
L2HGDH | chr14 | 50730076 | 50730077 | rs10400736 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SSMP, | 2 | 0.015373 |
L2HGDH | chr14 | 50730186 | 50730187 | rs75408779 | + | A | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989547 |
L2HGDH | chr14 | 50730483 | 50730484 | rs116713532 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
L2HGDH | chr14 | 50730514 | 50730515 | rs10400794 | + | C | C/T | single | intron | 2 | 1000GENOMES,BCM_SSAHASNP, | 2 | 0.986685 |
L2HGDH | chr14 | 50730660 | 50730661 | rs10400739 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.017415 |
L2HGDH | chr14 | 50730817 | 50730818 | rs35364406 | + | C | C/T | single | intron | 6 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.982585 |
L2HGDH | chr14 | 50730838 | 50730839 | rs112131693 | + | T | A/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SSMP, | 2 | 0.016514 |
L2HGDH | chr14 | 50731155 | 50731156 | rs115575336 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
L2HGDH | chr14 | 50731358 | 50731359 | rs34327481 | + | A | A/G | single | intron | 7 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.980347 |
L2HGDH | chr14 | 50731499 | 50731500 | rs112379465 | + | G | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.011468 |
L2HGDH | chr14 | 50731547 | 50731549 | rs147763738 | + | AT | -/AT | deletion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.038108 |
L2HGDH | chr14 | 50731599 | 50731600 | rs8007752 | + | T | C/T | single | intron | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.010453 |
L2HGDH | chr14 | 50731625 | 50731627 | rs148824535 | + | AT | -/AT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.034435 |
L2HGDH | chr14 | 50732041 | 50732042 | rs12432673 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.411286 |
L2HGDH | chr14 | 50732623 | 50732624 | rs114475843 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
L2HGDH | chr14 | 50732946 | 50732947 | rs2355885 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.499305 |
L2HGDH | chr14 | 50733232 | 50733233 | rs61582827 | + | T | G/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.012363 |
L2HGDH | chr14 | 50733824 | 50733825 | rs17715808 | + | A | A/C | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.978898 |
L2HGDH | chr14 | 50733889 | 50733890 | rs143061401 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.020661 |
L2HGDH | chr14 | 50733893 | 50733894 | rs191191028 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
L2HGDH | chr14 | 50733905 | 50733906 | rs181124381 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.073921 |
L2HGDH | chr14 | 50733962 | 50733963 | rs147064953 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.922406 |
L2HGDH | chr14 | 50734099 | 50734100 | rs12431485 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.543300 |
L2HGDH | chr14 | 50734151 | 50734152 | rs141957010 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.046832 |
L2HGDH | chr14 | 50734188 | 50734189 | rs112214370 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.048055 |
L2HGDH | chr14 | 50734277 | 50734278 | rs12431539 | + | T | G/T | single | intron | 9 | 1000GENOMES,ABI,BGI,BL,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,SSAHASNP, | 2 | 0.408425 |
L2HGDH | chr14 | 50734281 | 50734282 | rs12431540 | + | T | G/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP, | 2 | 0.706606 |
L2HGDH | chr14 | 50734956 | 50734957 | rs148656301 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.965565 |
L2HGDH | chr14 | 50735327 | 50735328 | rs74655060 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.013066 |
L2HGDH | chr14 | 50735504 | 50735505 | rs1040689 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.047654 |
L2HGDH | chr14 | 50735601 | 50735602 | rs78813265 | + | C | C/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.988532 |
L2HGDH | chr14 | 50735610 | 50735611 | rs17122336 | + | G | A/G | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA,PERLEGEN,TISHKOFF, | 2 | 0.030635 |
L2HGDH | chr14 | 50735644 | 50735645 | rs60167764 | + | A | A/C | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.962544 |
L2HGDH | chr14 | 50736286 | 50736287 | rs8015598 | + | T | C/T | single | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.010778 |
L2HGDH | chr14 | 50736341 | 50736342 | rs8015621 | + | T | A/T | single | intron | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.010453 |
L2HGDH | chr14 | 50736724 | 50736725 | rs2153553 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.523644 |
L2HGDH | chr14 | 50737318 | 50737319 | rs4129162 | + | G | A/G | single | intron | 7 | 1000GENOMES,ABI,COMPLETE_GENOMICS,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.061927 |
L2HGDH | chr14 | 50737668 | 50737669 | rs4901008 | + | A | A/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.590785 |
L2HGDH | chr14 | 50739141 | 50739142 | rs79971793 | + | C | C/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.988532 |
L2HGDH | chr14 | 50739484 | 50739485 | rs11157734 | + | A | A/C | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.420120 |
L2HGDH | chr14 | 50739945 | 50739946 | rs147975298 | + | A | -/A | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.011019 |
L2HGDH | chr14 | 50740046 | 50740047 | rs17406958 | + | C | C/T | single | intron | 8 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.974159 |
L2HGDH | chr14 | 50740190 | 50740191 | rs2883802 | + | A | A/C | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.485858 |
L2HGDH | chr14 | 50740277 | 50740278 | rs114252236 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.039634 |
L2HGDH | chr14 | 50740449 | 50740450 | rs115185093 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.987805 |
L2HGDH | chr14 | 50740604 | 50740605 | rs11849020 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.424146 |
L2HGDH | chr14 | 50740627 | 50740628 | rs138491608 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.929752 |
L2HGDH | chr14 | 50740699 | 50740700 | rs11849059 | + | C | A/C | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.571885 |
L2HGDH | chr14 | 50741030 | 50741031 | rs35059048 | + | A | A/G | single | intron | 3 | 1000GENOMES,ABI,ENSEMBL, | 2 | 0.989918 |
L2HGDH | chr14 | 50741706 | 50741707 | rs116748760 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989111 |
L2HGDH | chr14 | 50741898 | 50741898 | rs142905920 | + | - | -/A | insertion | intron | 4 | 1000GENOMES,LUNTER,SSMP,TISHKOFF, | 2 | 0.929752 |
L2HGDH | chr14 | 50742248 | 50742249 | rs4901009 | + | T | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.738775 |
L2HGDH | chr14 | 50742340 | 50742341 | rs78262502 | + | A | A/C | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.962385 |
L2HGDH | chr14 | 50742391 | 50742392 | rs11851290 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA, | 2 | 0.989214 |
L2HGDH | chr14 | 50742546 | 50742547 | rs57843266 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.047183 |
L2HGDH | chr14 | 50743343 | 50743344 | rs73275194 | + | T | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.012363 |
L2HGDH | chr14 | 50743731 | 50743732 | rs1465159 | + | T | C/T | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.571922 |
L2HGDH | chr14 | 50744461 | 50744462 | rs140651628 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.011478 |
L2HGDH | chr14 | 50744537 | 50744538 | rs138479821 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.968320 |
L2HGDH | chr14 | 50744540 | 50744541 | rs141380237 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.975666 |
L2HGDH | chr14 | 50744543 | 50744544 | rs75718994 | + | A | A/C | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,ILLUMINA-UK, | 2 | 0.863365 |
L2HGDH | chr14 | 50745222 | 50745223 | rs73275195 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,NHLBI-ESP, | 2 | 0.989459 |
L2HGDH | chr14 | 50745524 | 50745525 | rs116571258 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989111 |
L2HGDH | chr14 | 50745793 | 50745794 | rs114448496 | + | T | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.010453 |
L2HGDH | chr14 | 50746096 | 50746097 | rs11332302 | + | G | -/G | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.512397 |
L2HGDH | chr14 | 50746173 | 50746174 | rs74703322 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.964679 |
L2HGDH | chr14 | 50747111 | 50747112 | rs113479239 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.013303 |
L2HGDH | chr14 | 50747336 | 50747337 | rs12432105 | + | T | G/T | single | intron | 17 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.555677 |
L2HGDH | chr14 | 50747830 | 50747831 | rs9743539 | + | T | G/T | single | intron | 5 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM, | 2 | 0.011628 |
L2HGDH | chr14 | 50747849 | 50747850 | rs115253800 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010889 |
L2HGDH | chr14 | 50748125 | 50748126 | rs7149462 | + | C | A/C/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.965565 |
L2HGDH | chr14 | 50748422 | 50748423 | rs192703645 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.033517 |
L2HGDH | chr14 | 50748427 | 50748427 | rs200178997 | + | - | -/G | insertion | intron | 1 | 1000GENOMES, | 2 | 0.966024 |
L2HGDH | chr14 | 50748852 | 50748853 | rs12889265 | + | T | C/T | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.566485 |
L2HGDH | chr14 | 50749866 | 50749867 | rs151333705 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
L2HGDH | chr14 | 50749920 | 50749921 | rs113149074 | + | G | -/G | deletion | intron | 3 | 1000GENOMES,BUSHMAN,LUNTER, | 2 | 0.357798 |
L2HGDH | chr14 | 50749923 | 50749924 | rs8019274 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.439662 |
L2HGDH | chr14 | 50750315 | 50750316 | rs12432978 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.440230 |
L2HGDH | chr14 | 50750576 | 50750577 | rs12433038 | + | A | A/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.492315 |
L2HGDH | chr14 | 50750778 | 50750779 | rs10135842 | + | G | A/G | single | intron | 12 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.143935 |
L2HGDH | chr14 | 50751182 | 50751183 | rs10483597 | - | G | A/C | single | intron | 10 | 1000GENOMES,AFFY,BCMHGSC_JDW,ENSEMBL,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.038511 |
L2HGDH | chr14 | 50751199 | 50751199 | rs11460377 | + | - | -/T | insertion | intron | 10 | 1000GENOMES,ABI,BILGI_BIOE,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.494495 |
L2HGDH | chr14 | 50751564 | 50751565 | rs6572655 | + | G | G/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.410453 |
L2HGDH | chr14 | 50751691 | 50751692 | rs142815942 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.018366 |
L2HGDH | chr14 | 50752219 | 50752220 | rs8004572 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.078986 |
L2HGDH | chr14 | 50752583 | 50752584 | rs78761462 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.040070 |
L2HGDH | chr14 | 50752757 | 50752758 | rs75473886 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010889 |
L2HGDH | chr14 | 50752875 | 50752876 | rs12882001 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,AFFY,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP, | 2 | 0.036612 |
L2HGDH | chr14 | 50753073 | 50753073 | rs149572581 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.979798 |
L2HGDH | chr14 | 50753241 | 50753242 | rs11849603 | + | C | C/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.422561 |
L2HGDH | chr14 | 50753562 | 50753563 | rs17122352 | + | C | C/T | single | intron | 3 | 1000GENOMES,PERLEGEN,TISHKOFF, | 2 | 0.965693 |
L2HGDH | chr14 | 50753706 | 50753707 | rs116475753 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.010889 |
L2HGDH | chr14 | 50753817 | 50753818 | rs115313890 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.020035 |
L2HGDH | chr14 | 50753826 | 50753827 | rs12886516 | + | G | G/T | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP, | 3 | 0.821075 |
L2HGDH | chr14 | 50753991 | 50753992 | rs7154966 | + | T | C/T | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.583485 |
L2HGDH | chr14 | 50754249 | 50754250 | rs80027895 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.038328 |
L2HGDH | chr14 | 50754680 | 50754681 | rs12436483 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.494521 |
L2HGDH | chr14 | 50754709 | 50754710 | rs12436501 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.599087 |
L2HGDH | chr14 | 50754968 | 50754969 | rs17716174 | + | A | A/C | single | intron | 9 | 1000GENOMES,AFFY,BCMHGSC_JDW,ENSEMBL,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.941567 |
L2HGDH | chr14 | 50755087 | 50755088 | rs78712705 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986934 |
L2HGDH | chr14 | 50755361 | 50755362 | rs113177564 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.867431 |
L2HGDH | chr14 | 50755373 | 50755374 | rs138038370 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.985308 |
L2HGDH | chr14 | 50755385 | 50755386 | rs74889514 | + | T | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.070642 |
L2HGDH | chr14 | 50755670 | 50755671 | rs8022617 | + | C | C/T | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.472668 |
L2HGDH | chr14 | 50755856 | 50755857 | rs111937527 | + | A | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.988084 |
L2HGDH | chr14 | 50755990 | 50755991 | rs12881896 | + | C | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP, | 2 | 0.420985 |
L2HGDH | chr14 | 50756019 | 50756020 | rs74735522 | + | T | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.015679 |
L2HGDH | chr14 | 50756088 | 50756089 | rs12882050 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP, | 2 | 0.431189 |
L2HGDH | chr14 | 50756384 | 50756385 | rs17122355 | + | T | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,PERLEGEN,SSMP, | 2 | 0.012048 |
L2HGDH | chr14 | 50756395 | 50756396 | rs17778466 | + | A | A/T | single | intron | 5 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,PERLEGEN,SSMP, | 2 | 0.948251 |
L2HGDH | chr14 | 50756711 | 50756712 | rs139363658 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.965565 |
L2HGDH | chr14 | 50756809 | 50756810 | rs181098653 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.034435 |
L2HGDH | chr14 | 50756986 | 50756986 | rs199797742 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.971074 |
L2HGDH | chr14 | 50757094 | 50757095 | rs9888568 | + | C | C/T | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.489091 |
L2HGDH | chr14 | 50757130 | 50757131 | rs9888567 | + | A | A/C | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.412644 |
L2HGDH | chr14 | 50757594 | 50757594 | rs199628176 | + | - | -/T | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.988062 |
L2HGDH | chr14 | 50757847 | 50757848 | rs112703335 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.022904 |
L2HGDH | chr14 | 50758218 | 50758219 | rs116330607 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.989111 |
L2HGDH | chr14 | 50758252 | 50758253 | rs17122357 | + | G | A/G | single | intron | 6 | 1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.038080 |
L2HGDH | chr14 | 50758564 | 50758565 | rs7158883 | + | T | C/T | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF, | 2 | 0.153706 |
L2HGDH | chr14 | 50758816 | 50758821 | rs149022072 | + | AATAT | -/AATAT | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.070248 |
L2HGDH | chr14 | 50759202 | 50759203 | rs12586416 | + | T | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.410959 |
L2HGDH | chr14 | 50759260 | 50759261 | rs7141428 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.989111 |
L2HGDH | chr14 | 50759352 | 50759353 | rs61242556 | + | G | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.046309 |
L2HGDH | chr14 | 50759462 | 50759463 | rs60116101 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.045392 |
L2HGDH | chr14 | 50759677 | 50759678 | rs7142135 | + | A | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.423760 |
L2HGDH | chr14 | 50759866 | 50759867 | rs114515014 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.041376 |
L2HGDH | chr14 | 50760028 | 50760029 | rs116103825 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.010889 |
L2HGDH | chr14 | 50760029 | 50760030 | rs12894758 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.822979 |
L2HGDH | chr14 | 50760250 | 50760251 | rs11851584 | + | A | A/T | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.863832 |
L2HGDH | chr14 | 50760381 | 50760382 | rs76346958 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.037456 |
L2HGDH | chr14 | 50760383 | 50760384 | rs56747827 | + | G | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.011905 |
L2HGDH | chr14 | 50760465 | 50760466 | rs56820086 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.011905 |
L2HGDH | chr14 | 50761846 | 50761847 | rs7144289 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.541971 |
L2HGDH | chr14 | 50762270 | 50762271 | rs117382920 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.017406 |
L2HGDH | chr14 | 50762700 | 50762701 | rs7151147 | + | T | C/T | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSMP, | 2 | 0.708467 |
L2HGDH | chr14 | 50764107 | 50764107 | rs148803952 | + | - | -/A | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.968779 |
L2HGDH | chr14 | 50765096 | 50765097 | rs190103238 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.016529 |
L2HGDH | chr14 | 50765210 | 50765211 | rs113231941 | + | T | G/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.047204 |
L2HGDH | chr14 | 50765757 | 50765758 | rs4901010 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.506014 |
L2HGDH | chr14 | 50765923 | 50765924 | rs80190354 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.927982 |
L2HGDH | chr14 | 50766028 | 50766029 | rs2153554 | + | A | A/G | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.864265 |
L2HGDH | chr14 | 50767504 | 50767505 | rs113989112 | + | C | C/T | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.988084 |
L2HGDH | chr14 | 50767548 | 50767549 | rs116110419 | + | T | C/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.011760 |
L2HGDH | chr14 | 50767751 | 50767752 | rs111526615 | + | C | C/T | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.987637 |
L2HGDH | chr14 | 50767813 | 50767814 | rs73277317 | + | C | C/G | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.987637 |
L2HGDH | chr14 | 50767873 | 50767874 | rs112771654 | + | G | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.012374 |
L2HGDH | chr14 | 50768389 | 50768390 | rs61584633 | + | A | A/G | single | intron,near-gene-5 | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP,TISHKOFF, | 2 | 0.980311 |
L2HGDH | chr14 | 50768482 | 50768483 | rs4901011 | + | A | A/G | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.423304 |
L2HGDH | chr14 | 50768587 | 50768588 | rs73277322 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS, | 2 | 0.989464 |
L2HGDH | chr14 | 50768698 | 50768699 | rs41299197 | + | T | C/T | single | intron | 6 | 1000GENOMES,CLINSEQ_SNP,HGSV,ILLUMINA,NHLBI-ESP,SI_EXO, | 2 | 0.043349 |
L2HGDH | chr14 | 50769326 | 50769327 | rs2297993 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.415183 |
L2HGDH | chr14 | 50769355 | 50769356 | rs115316721 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.989111 |
L2HGDH | chr14 | 50769384 | 50769385 | rs55851766 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.924840 |
L2HGDH | chr14 | 50769454 | 50769455 | rs2297994 | + | G | G/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.428298 |
L2HGDH | chr14 | 50769858 | 50769859 | rs17122363 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,PERLEGEN,SSMP, | 2 | 0.987511 |
L2HGDH | chr14 | 50769867 | 50769868 | rs1962578 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.415525 |
L2HGDH | chr14 | 50769900 | 50769901 | rs1974327 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.428377 |
L2HGDH | chr14 | 50770014 | 50770015 | rs1962579 | + | C | A/C/G/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.479252 |
L2HGDH | chr14 | 50770042 | 50770043 | rs112503230 | + | G | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.021101 |
L2HGDH | chr14 | 50770520 | 50770521 | rs1557010 | + | G | G/T | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SC_JCM,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.100000 |
L2HGDH | chr14 | 50770984 | 50770985 | rs79207710 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.039634 |
L2HGDH | chr14 | 50772402 | 50772403 | rs8018446 | + | C | C/T | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.427335 |
L2HGDH | chr14 | 50772733 | 50772734 | rs11851370 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.464286 |
L2HGDH | chr14 | 50772799 | 50772800 | rs192789987 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.969697 |
L2HGDH | chr14 | 50773074 | 50773075 | rs73277332 | + | T | G/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.011916 |
L2HGDH | chr14 | 50773288 | 50773289 | rs113886089 | + | T | -/T | deletion | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.118349 |
L2HGDH | chr14 | 50773295 | 50773296 | rs946993 | + | T | G/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.494632 |
L2HGDH | chr14 | 50773309 | 50773310 | rs200320716 | + | G | -/G | deletion | intron | 1 | 1000GENOMES, | 2 | 0.069789 |
L2HGDH | chr14 | 50773426 | 50773427 | rs17122365 | + | T | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,PERLEGEN, | 2 | 0.011628 |
L2HGDH | chr14 | 50773538 | 50773539 | rs78230395 | + | T | A/T | single | intron | 3 | 1000GENOMES,BL,GMI, | 2 | 0.209385 |
L2HGDH | chr14 | 50773539 | 50773540 | rs12880166 | + | T | A/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP, | 2 | 0.553522 |
L2HGDH | chr14 | 50773575 | 50773576 | rs12880323 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.572599 |
L2HGDH | chr14 | 50773869 | 50773870 | rs7143204 | + | T | G/T | single | intron | 9 | 1000GENOMES,BCM_SSAHASNP,BGI,BL,GMI,ILLUMINA,PJP,SSMP,WI_SSAHASNP, | 2 | 0.197075 |
L2HGDH | chr14 | 50774503 | 50774504 | rs73277336 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,SSMP, | 2 | 0.012363 |
L2HGDH | chr14 | 50774830 | 50774831 | rs73277339 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.012363 |
L2HGDH | chr14 | 50775053 | 50775054 | rs8015010 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK,WI_SSAHASNP, | 2 | 0.021540 |
L2HGDH | chr14 | 50775318 | 50775319 | rs6572656 | + | C | A/C | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.579732 |
L2HGDH | chr14 | 50775475 | 50775476 | rs12433317 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.428245 |
L2HGDH | chr14 | 50775740 | 50775750 | rs144747446 | + | TTTTGAGAGT | -/TTTTGAGAGT | deletion | intron | 4 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER, | 2 | 0.521579 |
L2HGDH | chr14 | 50776005 | 50776006 | rs112733256 | + | T | G/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.038073 |
L2HGDH | chr14 | 50776240 | 50776241 | rs7158964 | + | C | C/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.409859 |
L2HGDH | chr14 | 50776297 | 50776298 | rs114696998 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.986934 |
L2HGDH | chr14 | 50776532 | 50776533 | rs112083596 | + | T | A/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.011009 |
L2HGDH | chr14 | 50776544 | 50776545 | rs8021001 | + | A | A/G | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.423883 |
L2HGDH | chr14 | 50776586 | 50776587 | rs116023915 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.011760 |
L2HGDH | chr14 | 50776863 | 50776864 | rs77039032 | + | T | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.021777 |
L2HGDH | chr14 | 50776896 | 50776897 | rs79988677 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.022213 |
L2HGDH | chr14 | 50777429 | 50777430 | rs8007800 | + | T | C/T | single | intron,near-gene-5 | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSMP,WI_SSAHASNP, | 2 | 0.545247 |
L2HGDH | chr14 | 50777658 | 50777659 | rs188617542 | + | T | C/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.100092 |
L2HGDH | chr14 | 50777658 | 50777658 | rs200515426 | + | - | -/C | insertion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.899449 |
L2HGDH | chr14 | 50778268 | 50778268 | rs72473098 | + | - | -/T | insertion | intron,near-gene-5 | 5 | 1000GENOMES,DEVINE_LAB,LUNTER,SSMP,TISHKOFF, | 2 | 0.872819 |
DUOX2 | chr15 | 45386655 | 45386656 | rs7171366 | + | T | G/T | single | intron | 14 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.231763 |
DUOX2 | chr15 | 45387388 | 45387389 | rs111280439 | + | A | A/C | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984418 |
DUOX2 | chr15 | 45387549 | 45387550 | rs199138 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.703597 |
DUOX2 | chr15 | 45387898 | 45387899 | rs16977579 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.116008 |
DUOX2 | chr15 | 45388381 | 45388382 | rs2554451 | - | C | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.738897 |
DUOX2 | chr15 | 45388394 | 45388395 | rs73406323 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF, | 2 | 0.076853 |
DUOX2 | chr15 | 45388726 | 45388727 | rs73406325 | + | A | A/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.884369 |
DUOX2 | chr15 | 45390945 | 45390946 | rs111702374 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.015582 |
DUOX2 | chr15 | 45391210 | 45391211 | rs146865634 | + | C | -/C | deletion | intron | 1 | 1000GENOMES, | 2 | 0.039027 |
DUOX2 | chr15 | 45391293 | 45391294 | rs4774515 | + | C | C/T | single | intron | 4 | 1000GENOMES,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.960587 |
DUOX2 | chr15 | 45391454 | 45391455 | rs56833067 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.800824 |
DUOX2 | chr15 | 45391498 | 45391499 | rs113618416 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.961962 |
DUOX2 | chr15 | 45391524 | 45391525 | rs111613241 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984418 |
DUOX2 | chr15 | 45392154 | 45392155 | rs143612396 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
DUOX2 | chr15 | 45392516 | 45392517 | rs77512689 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.031794 |
DUOX2 | chr15 | 45392777 | 45392778 | rs79374174 | + | G | C/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.014679 |
DUOX2 | chr15 | 45392811 | 45392812 | rs76356689 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.037580 |
DUOX2 | chr15 | 45392900 | 45392901 | rs75048501 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.984876 |
DUOX2 | chr15 | 45393360 | 45393361 | rs111706445 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,NHLBI-ESP, | 2 | 0.010092 |
DUOX2 | chr15 | 45393666 | 45393667 | rs953733 | + | A | A/G | single | intron | 11 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.848717 |
DUOX2 | chr15 | 45393929 | 45393930 | rs78256554 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.037580 |
DUOX2 | chr15 | 45394405 | 45394406 | rs269866 | - | G | C/T | single | intron | 22 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.466145 |
DUOX2 | chr15 | 45394518 | 45394519 | rs116562151 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016551 |
DUOX2 | chr15 | 45394582 | 45394583 | rs111477569 | + | G | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.031193 |
DUOX2 | chr15 | 45394811 | 45394812 | rs112473943 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.015124 |
DUOX2 | chr15 | 45394920 | 45394921 | rs56838826 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.091491 |
DUOX2 | chr15 | 45395583 | 45395584 | rs61626661 | + | A | A/G | single | intron | 9 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.924943 |
DUOX2 | chr15 | 45395644 | 45395644 | rs143847058 | + | - | -/T | insertion | intron | 2 | 1000GENOMES,BL, | 2 | 0.980257 |
DUOX2 | chr15 | 45395795 | 45395796 | rs112432895 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984418 |
DUOX2 | chr15 | 45396288 | 45396289 | rs113684942 | + | T | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.016972 |
DUOX2 | chr15 | 45396611 | 45396612 | rs80095330 | + | T | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.030488 |
DUOX2 | chr15 | 45396749 | 45396750 | rs113078084 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.984418 |
DUOX2 | chr15 | 45397202 | 45397203 | rs141433708 | + | G | A/G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.028007 |
DUOX2 | chr15 | 45397565 | 45397566 | rs269863 | - | G | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.265925 |
DUOX2 | chr15 | 45397830 | 45397831 | rs73406330 | + | G | A/G | single | intron | 11 | 1000GENOMES,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.120867 |
DUOX2 | chr15 | 45398088 | 45398089 | rs79849154 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982143 |
DUOX2 | chr15 | 45398126 | 45398127 | rs115012702 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.988676 |
DUOX2 | chr15 | 45398230 | 45398231 | rs73406335 | + | T | G/T | single | intron | 8 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.123400 |
DUOX2 | chr15 | 45398313 | 45398314 | rs73406337 | + | G | A/G | single | intron | 11 | 1000GENOMES,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.071040 |
DUOX2 | chr15 | 45398628 | 45398629 | rs79757509 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.024390 |
DUOX2 | chr15 | 45398964 | 45398965 | rs269862 | - | G | A/C | single | intron | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.825515 |
DUOX2 | chr15 | 45399310 | 45399311 | rs78922026 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.975610 |
DUOX2 | chr15 | 45399466 | 45399467 | rs190599 | - | A | C/T | single | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.865771 |
DUOX2 | chr15 | 45399532 | 45399533 | rs76411432 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.975610 |
DUOX2 | chr15 | 45399991 | 45399992 | rs166574 | - | T | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.252737 |
DUOX2 | chr15 | 45400013 | 45400014 | rs142530819 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986226 |
DUOX2 | chr15 | 45400121 | 45400122 | rs116831463 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.023955 |
DUOX2 | chr15 | 45400163 | 45400164 | rs269861 | - | T | A/G | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.164695 |
DUOX2 | chr15 | 45400448 | 45400449 | rs117599686 | + | G | A/G | single | intron | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SSMP, | 2 | 0.011127 |
DUOX2 | chr15 | 45400449 | 45400450 | rs79570265 | + | C | C/T | single | intron | 3 | 1000GENOMES,NHLBI-ESP,SSMP, | 2 | 0.975610 |
DUOX2 | chr15 | 45400611 | 45400611 | rs200873281 | + | - | -/G | insertion | intron | 1 | 1000GENOMES, | 2 | 0.910468 |
DUOX2 | chr15 | 45400613 | 45400613 | rs144393243 | + | - | -/C | insertion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.921947 |
DUOX2 | chr15 | 45401635 | 45401636 | rs1961660 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.808531 |
DUOX2 | chr15 | 45402318 | 45402319 | rs111737855 | + | T | C/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.072377 |
DUOX2 | chr15 | 45402428 | 45402429 | rs72724247 | + | T | G/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.011019 |
DUOX2 | chr15 | 45402478 | 45402479 | rs113324656 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.985321 |
DUOX2 | chr15 | 45402939 | 45402940 | rs269859 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KWOK,NHLBI-ESP,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.814868 |
DUOX2 | chr15 | 45402964 | 45402965 | rs114240217 | + | G | G/T | single | intron | 3 | 1000GENOMES,NHLBI-ESP,TISHKOFF, | 2 | 0.969948 |
DUOX2 | chr15 | 45402989 | 45402990 | rs80231352 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.012620 |
DUOX2 | chr15 | 45403016 | 45403017 | rs74011359 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,SSMP, | 2 | 0.985780 |
DUOX2 | chr15 | 45403036 | 45403037 | rs113800136 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.011468 |
DUOX2 | chr15 | 45403095 | 45403096 | rs2412956 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.983516 |
DUOX2 | chr15 | 45403511 | 45403512 | rs200998617 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.045454 |
DUOX2 | chr15 | 45403916 | 45403917 | rs181503132 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984848 |
DUOX2 | chr15 | 45404692 | 45404693 | rs751151 | - | C | A/G | single | intron,near-gene-5 | 8 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.051817 |
DUOX2 | chr15 | 45404698 | 45404699 | rs76180151 | + | C | C/T | single | intron,near-gene-5 | 7 | 1000GENOMES,BL,CLINSEQ_SNP,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.968483 |
DUOX2 | chr15 | 45404996 | 45404997 | rs113700172 | + | C | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.985321 |
DUOX2 | chr15 | 45405145 | 45405146 | rs74367551 | + | G | G/T | single | intron,near-gene-5 | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.971127 |
DUOX2 | chr15 | 45405322 | 45405323 | rs77078382 | + | C | A/C | single | intron,near-gene-5 | 3 | 1000GENOMES,NHLBI-ESP,TISHKOFF, | 2 | 0.029617 |
DUOX2 | chr15 | 45405413 | 45405414 | rs75354193 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.969948 |
DUOX2 | chr15 | 45405462 | 45405463 | rs269856 | + | G | G/T | single | intron,near-gene-5 | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.141864 |
DUOX2 | chr15 | 45405986 | 45405987 | rs269855 | - | G | C/T | single | intron,near-gene-5 | 22 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.038063 |
ETFA | chr15 | 76510035 | 76510036 | rs116724809 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.012631 |
ETFA | chr15 | 76510072 | 76510073 | rs1533600 | - | G | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.029300 |
ETFA | chr15 | 76510240 | 76510241 | rs79195417 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012631 |
ETFA | chr15 | 76510303 | 76510304 | rs12916022 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.391781 |
ETFA | chr15 | 76510524 | 76510525 | rs114145226 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.026568 |
ETFA | chr15 | 76510581 | 76510582 | rs2245180 | - | G | C/T | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.027350 |
ETFA | chr15 | 76510695 | 76510696 | rs2469570 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.964025 |
ETFA | chr15 | 76510699 | 76510700 | rs62030229 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.748168 |
ETFA | chr15 | 76511404 | 76511405 | rs80154152 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.972561 |
ETFA | chr15 | 76511980 | 76511981 | rs79641522 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027439 |
ETFA | chr15 | 76512026 | 76512027 | rs2456039 | - | A | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.978578 |
ETFA | chr15 | 76512356 | 76512357 | rs72736862 | + | A | A/G | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.942467 |
ETFA | chr15 | 76512406 | 76512407 | rs11853864 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,CSHL-HAPMAP,ENSEMBL, | 2 | 0.983516 |
ETFA | chr15 | 76512975 | 76512976 | rs117827176 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986510 |
ETFA | chr15 | 76512999 | 76513000 | rs117973661 | + | T | G/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA,SSMP, | 2 | 0.023499 |
ETFA | chr15 | 76513239 | 76513240 | rs34213321 | + | A | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.591241 |
ETFA | chr15 | 76513552 | 76513553 | rs2469571 | + | G | A/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.924125 |
ETFA | chr15 | 76513626 | 76513627 | rs62030230 | + | A | A/C | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.936239 |
ETFA | chr15 | 76513965 | 76513966 | rs76634793 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.973868 |
ETFA | chr15 | 76514360 | 76514361 | rs11072578 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP, | 2 | 0.670815 |
ETFA | chr15 | 76514589 | 76514591 | rs199626564 | + | AA | -/AA | deletion | intron | 1 | 1000GENOMES, | 2 | 0.016070 |
ETFA | chr15 | 76514667 | 76514668 | rs11475733 | + | T | -/T | deletion | intron | 7 | 1000GENOMES,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,PJP,SSMP, | 2 | 0.350781 |
ETFA | chr15 | 76514895 | 76514896 | rs77815174 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.051282 |
ETFA | chr15 | 76514944 | 76514945 | rs55772702 | + | C | C/T | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,HGSV,ILLUMINA,SSMP, | 2 | 0.926147 |
ETFA | chr15 | 76515031 | 76515031 | rs147485608 | + | - | -/A | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.973829 |
ETFA | chr15 | 76515119 | 76515120 | rs883993 | + | G | C/G | single | intron | 10 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,GMI,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.353994 |
ETFA | chr15 | 76515280 | 76515281 | rs1810347 | - | A | G/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.943431 |
ETFA | chr15 | 76515703 | 76515704 | rs7175022 | + | A | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.941797 |
ETFA | chr15 | 76517047 | 76517048 | rs3784449 | + | G | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.354613 |
ETFA | chr15 | 76517166 | 76517167 | rs2456038 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.946574 |
ETFA | chr15 | 76517876 | 76517877 | rs56233972 | + | G | A/G/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,HGSV,SSMP,TISHKOFF, | 2 | 0.060092 |
ETFA | chr15 | 76517893 | 76517894 | rs145400891 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.051423 |
ETFA | chr15 | 76518345 | 76518345 | rs200152795 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.049587 |
ETFA | chr15 | 76518639 | 76518640 | rs62030232 | + | T | G/T | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SSMP, | 2 | 0.351487 |
ETFA | chr15 | 76518940 | 76518941 | rs148568611 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.984389 |
ETFA | chr15 | 76518948 | 76518949 | rs141994554 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
ETFA | chr15 | 76519075 | 76519076 | rs150704896 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.987603 |
ETFA | chr15 | 76519133 | 76519134 | rs11631764 | + | G | A/G | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,SSAHASNP,SSMP, | 2 | 0.320642 |
ETFA | chr15 | 76519135 | 76519136 | rs11631690 | + | C | C/T | single | intron | 9 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,SSAHASNP,SSMP, | 2 | 0.684404 |
ETFA | chr15 | 76519205 | 76519206 | rs2957036 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP, | 2 | 0.962997 |
ETFA | chr15 | 76519480 | 76519481 | rs75375526 | + | A | A/G | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,GMI, | 2 | 0.984769 |
ETFA | chr15 | 76519559 | 76519560 | rs144051186 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.014692 |
ETFA | chr15 | 76520363 | 76520364 | rs78057253 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.039199 |
ETFA | chr15 | 76520675 | 76520676 | rs1518964 | - | C | A/G | single | intron | 5 | 1000GENOMES,ABI,BUSHMAN,TISHKOFF,TSC-CSHL, | 2 | 0.015396 |
ETFA | chr15 | 76520841 | 76520842 | rs74762436 | + | A | A/C | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.984404 |
ETFA | chr15 | 76521769 | 76521770 | rs3898352 | - | G | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.663866 |
ETFA | chr15 | 76521797 | 76521798 | rs959991 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.638609 |
ETFA | chr15 | 76522039 | 76522040 | rs1047357 | - | G | C/T | single | intron | 4 | 1000GENOMES,AFFY,LEE,TISHKOFF, | 2 | 0.967432 |
ETFA | chr15 | 76522103 | 76522104 | rs4886783 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.699279 |
ETFA | chr15 | 76522205 | 76522206 | rs78528554 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.011760 |
ETFA | chr15 | 76522856 | 76522857 | rs186147590 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.200643 |
ETFA | chr15 | 76522941 | 76522942 | rs2405326 | - | T | A/G | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,SSAHASNP,SSMP,TSC-CSHL, | 2 | 0.051645 |
ETFA | chr15 | 76522981 | 76522982 | rs7175442 | + | G | G/T | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.966024 |
ETFA | chr15 | 76523273 | 76523274 | rs76155326 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.975688 |
ETFA | chr15 | 76523619 | 76523620 | rs76403342 | + | C | A/C | single | intron | 5 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,NHLBI-ESP,TISHKOFF, | 2 | 0.025263 |
ETFA | chr15 | 76523770 | 76523771 | rs62030234 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,NHLBI-ESP,SSMP, | 2 | 0.057798 |
ETFA | chr15 | 76524058 | 76524059 | rs111591775 | + | T | G/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.031207 |
ETFA | chr15 | 76524138 | 76524139 | rs76505232 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.988240 |
ETFA | chr15 | 76524449 | 76524450 | rs2469536 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.021806 |
ETFA | chr15 | 76524643 | 76524644 | rs4886784 | + | T | G/T | single | intron | 8 | 1000GENOMES,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,TISHKOFF,WI_SSAHASNP, | 2 | 0.350688 |
ETFA | chr15 | 76525222 | 76525223 | rs77358466 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027439 |
ETFA | chr15 | 76525257 | 76525258 | rs76200311 | + | T | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,GMI,ILLUMINA,SSMP, | 2 | 0.023934 |
ETFA | chr15 | 76525425 | 76525426 | rs7177923 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.361261 |
ETFA | chr15 | 76525832 | 76525833 | rs145567147 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.030762 |
ETFA | chr15 | 76526409 | 76526410 | rs16968016 | + | C | C/G | single | intron | 8 | 1000GENOMES,BGI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.951419 |
ETFA | chr15 | 76526906 | 76526907 | rs2456058 | - | T | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.018679 |
ETFA | chr15 | 76526911 | 76526912 | rs2456057 | - | G | C/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.409112 |
ETFA | chr15 | 76527084 | 76527085 | rs78538242 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.038328 |
ETFA | chr15 | 76527629 | 76527630 | rs8033494 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.346413 |
ETFA | chr15 | 76527954 | 76527955 | rs4886484 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.429201 |
ETFA | chr15 | 76528040 | 76528041 | rs79095910 | + | A | A/C | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.973455 |
ETFA | chr15 | 76528159 | 76528160 | rs8033926 | + | A | A/G | single | intron | 3 | 1000GENOMES,TISHKOFF,WI_SSAHASNP, | 2 | 0.963790 |
ETFA | chr15 | 76528830 | 76528831 | rs12595211 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.653198 |
ETFA | chr15 | 76529033 | 76529034 | rs111849590 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.025700 |
ETFA | chr15 | 76529047 | 76529048 | rs62030235 | + | G | C/G | single | intron | 4 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP, | 2 | 0.041284 |
ETFA | chr15 | 76529478 | 76529479 | rs199935072 | + | T | -/T | deletion | intron | 1 | 1000GENOMES, | 2 | 0.014692 |
ETFA | chr15 | 76529722 | 76529723 | rs2176622 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.978161 |
ETFA | chr15 | 76530102 | 76530103 | rs57182285 | + | G | C/G | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.324634 |
ETFA | chr15 | 76530216 | 76530217 | rs77022998 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.985192 |
ETFA | chr15 | 76530266 | 76530267 | rs2460143 | - | C | G/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.032860 |
ETFA | chr15 | 76530433 | 76530434 | rs117556108 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.978677 |
ETFA | chr15 | 76530839 | 76530840 | rs2456056 | - | T | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.019985 |
ETFA | chr15 | 76531449 | 76531450 | rs11072579 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.655547 |
ETFA | chr15 | 76531519 | 76531520 | rs4886485 | + | A | A/C | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.704656 |
ETFA | chr15 | 76531640 | 76531641 | rs57634299 | + | C | C/G | single | intron | 5 | 1000GENOMES,BGI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.948624 |
ETFA | chr15 | 76531660 | 76531661 | rs2460142 | - | G | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA-UK,SC_JCM,TISHKOFF, | 2 | 0.935839 |
ETFA | chr15 | 76532669 | 76532670 | rs75830587 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.026110 |
ETFA | chr15 | 76532844 | 76532845 | rs2460141 | - | G | C/G | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.097826 |
ETFA | chr15 | 76533515 | 76533516 | rs117181475 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989556 |
ETFA | chr15 | 76533916 | 76533917 | rs11637855 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.309808 |
ETFA | chr15 | 76534061 | 76534062 | rs147396188 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.061983 |
ETFA | chr15 | 76534120 | 76534121 | rs188134178 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.971534 |
ETFA | chr15 | 76534182 | 76534183 | rs114463047 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.964721 |
ETFA | chr15 | 76535611 | 76535611 | rs139381703 | + | - | -/A | insertion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.680441 |
ETFA | chr15 | 76535695 | 76535696 | rs5012144 | + | C | C/T | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,DEVINE_LAB,GMI,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.650172 |
ETFA | chr15 | 76535742 | 76535743 | rs2456070 | + | C | C/T | single | intron | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.885568 |
ETFA | chr15 | 76535902 | 76535903 | rs59783688 | + | C | -/C | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,GMI,HGSV,LUNTER,SSMP, | 2 | 0.309917 |
ETFA | chr15 | 76535922 | 76535923 | rs114566411 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.974303 |
ETFA | chr15 | 76535973 | 76535974 | rs60017340 | + | T | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SSMP, | 2 | 0.314390 |
ETFA | chr15 | 76536157 | 76536157 | rs199573968 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.947658 |
ETFA | chr15 | 76536161 | 76536161 | rs150900759 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,BL, | 2 | 0.468779 |
ETFA | chr15 | 76536164 | 76536164 | rs71140202 | + | - | -/C | insertion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER, | 2 | 0.584785 |
ETFA | chr15 | 76536336 | 76536337 | rs2456071 | + | C | C/T | single | intron | 12 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP, | 2 | 0.376884 |
ETFA | chr15 | 76536505 | 76536506 | rs60290059 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP, | 2 | 0.347527 |
ETFA | chr15 | 76536650 | 76536651 | rs62030240 | + | A | A/T | single | intron | 5 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.938532 |
ETFA | chr15 | 76537475 | 76537476 | rs77387260 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.950000 |
ETFA | chr15 | 76538400 | 76538401 | rs76518305 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.964721 |
ETFA | chr15 | 76538458 | 76538459 | rs77633900 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.050868 |
ETFA | chr15 | 76538989 | 76538990 | rs56313024 | + | G | C/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,HGSV,SSMP,TISHKOFF, | 2 | 0.068411 |
ETFA | chr15 | 76539489 | 76539490 | rs2244050 | + | G | A/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.972485 |
ETFA | chr15 | 76539837 | 76539838 | rs4886787 | + | C | C/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.663336 |
ETFA | chr15 | 76539941 | 76539941 | rs202207851 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.984389 |
ETFA | chr15 | 76540230 | 76540231 | rs11072580 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.419636 |
ETFA | chr15 | 76540597 | 76540598 | rs116241547 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.035714 |
ETFA | chr15 | 76541100 | 76541101 | rs6495197 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.647623 |
ETFA | chr15 | 76541224 | 76541224 | rs200384853 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,GMI, | 2 | 0.803949 |
ETFA | chr15 | 76541625 | 76541626 | rs192838995 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.027089 |
ETFA | chr15 | 76541874 | 76541875 | rs186642524 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986226 |
ETFA | chr15 | 76542113 | 76542114 | rs12438741 | + | C | A/C | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.397448 |
ETFA | chr15 | 76542563 | 76542563 | rs11445780 | + | - | -/A | insertion | intron | 10 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.378552 |
ETFA | chr15 | 76542618 | 76542619 | rs117800361 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.968668 |
ETFA | chr15 | 76542879 | 76542880 | rs78529875 | + | G | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS, | 2 | 0.043080 |
ETFA | chr15 | 76543909 | 76543910 | rs2469548 | - | A | G/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.622567 |
ETFA | chr15 | 76543943 | 76543944 | rs11634472 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.649183 |
ETFA | chr15 | 76544123 | 76544124 | rs16968032 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.969438 |
ETFA | chr15 | 76544999 | 76545000 | rs114430298 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.033101 |
ETFA | chr15 | 76545843 | 76545844 | rs2456072 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.830008 |
ETFA | chr15 | 76546020 | 76546021 | rs2247488 | + | C | C/T | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.021789 |
ETFA | chr15 | 76546714 | 76546715 | rs76915335 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.988251 |
ETFA | chr15 | 76546730 | 76546731 | rs114031114 | + | C | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.988676 |
ETFA | chr15 | 76546932 | 76546933 | rs1914816 | - | G | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.814407 |
ETFA | chr15 | 76547417 | 76547418 | rs118119371 | + | C | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.971715 |
ETFA | chr15 | 76547946 | 76547947 | rs7167004 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,CSHL-HAPMAP,ENSEMBL,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.077532 |
ETFA | chr15 | 76548136 | 76548137 | rs59573516 | + | A | A/G | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA,TISHKOFF, | 2 | 0.986934 |
ETFA | chr15 | 76548578 | 76548579 | rs7166675 | + | A | A/G | single | intron | 4 | 1000GENOMES,BCM_SSAHASNP,HGSV,TISHKOFF, | 2 | 0.964711 |
ETFA | chr15 | 76548624 | 76548625 | rs2456073 | + | T | G/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP, | 2 | 0.928832 |
ETFA | chr15 | 76549531 | 76549532 | rs2469546 | - | C | A/G | single | intron | 19 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.972534 |
ETFA | chr15 | 76549534 | 76549535 | rs72736875 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.984848 |
ETFA | chr15 | 76549800 | 76549801 | rs138659405 | + | A | A/G | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.940771 |
ETFA | chr15 | 76550063 | 76550064 | rs4592616 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,GMI,HGSV,SC_JCM,SSMP,TISHKOFF, | 2 | 0.305225 |
ETFA | chr15 | 76550274 | 76550275 | rs111231955 | + | A | A/C | single | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,GMI,SSMP, | 2 | 0.693756 |
ETFA | chr15 | 76550932 | 76550933 | rs117050622 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.053090 |
ETFA | chr15 | 76550937 | 76550938 | rs2469545 | - | C | A/G | single | intron | 24 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.978219 |
ETFA | chr15 | 76550972 | 76550973 | rs11636851 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF, | 2 | 0.665261 |
ETFA | chr15 | 76551694 | 76551695 | rs111734384 | + | A | A/G | single | intron,ncRNA | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.965138 |
ETFA | chr15 | 76551776 | 76551777 | rs116240154 | + | G | A/G | single | intron,ncRNA | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.010453 |
ETFA | chr15 | 76551851 | 76551852 | rs12913096 | + | G | A/G | single | intron,ncRNA | 16 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.344171 |
ETFA | chr15 | 76551971 | 76551972 | rs76319667 | + | G | A/G | single | intron,ncRNA | 2 | 1000GENOMES,ENSEMBL, | 2 | 0.039908 |
ETFA | chr15 | 76552486 | 76552486 | rs199562413 | + | - | -/C | insertion | intron,ncRNA | 1 | 1000GENOMES, | 2 | 0.969697 |
ETFA | chr15 | 76553332 | 76553333 | rs62030244 | + | C | C/T | single | intron,near-gene-5 | 7 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.873052 |
ETFA | chr15 | 76553498 | 76553499 | rs62030245 | + | C | C/G | single | intron,near-gene-5 | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.682234 |
ETFA | chr15 | 76553587 | 76553588 | rs62030246 | + | G | A/G | single | intron,near-gene-5 | 8 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,ENSEMBL,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.306141 |
ETFA | chr15 | 76553789 | 76553790 | rs35831705 | + | C | C/T | single | intron,near-gene-5 | 10 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,ENSEMBL,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.690018 |
ETFA | chr15 | 76553889 | 76553890 | rs62027004 | + | C | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.954587 |
ETFA | chr15 | 76554670 | 76554670 | rs201202605 | + | - | -/A | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.952250 |
ETFA | chr15 | 76554754 | 76554755 | rs2460146 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.831195 |
ETFA | chr15 | 76554789 | 76554790 | rs12592501 | + | C | A/C | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.359165 |
ETFA | chr15 | 76554990 | 76554991 | rs2938697 | + | T | C/T | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.575785 |
ETFA | chr15 | 76555013 | 76555014 | rs60060261 | + | G | A/G | single | intron | 3 | 1000GENOMES,HGSV,TISHKOFF, | 2 | 0.030303 |
ETFA | chr15 | 76555028 | 76555029 | rs2957035 | + | A | A/T | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.053857 |
ETFA | chr15 | 76555420 | 76555421 | rs72475988 | + | C | A/C | single | intron | 6 | 1000GENOMES,BGI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.051835 |
ETFA | chr15 | 76555538 | 76555539 | rs2139190 | + | G | C/G | single | intron | 17 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.384077 |
ETFA | chr15 | 76555598 | 76555599 | rs2456074 | + | T | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.117216 |
ETFA | chr15 | 76555687 | 76555688 | rs150863351 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,TISHKOFF, | 2 | 0.012856 |
ETFA | chr15 | 76555719 | 76555720 | rs12050896 | + | T | C/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.364896 |
ETFA | chr15 | 76555985 | 76555986 | rs2456075 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.822374 |
ETFA | chr15 | 76556129 | 76556130 | rs56220133 | + | T | C/T | single | intron | 6 | 1000GENOMES,BL,ENSEMBL,HGSV,SSMP,TISHKOFF, | 2 | 0.056881 |
ETFA | chr15 | 76556698 | 76556699 | rs2404974 | + | T | G/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.356852 |
ETFA | chr15 | 76557475 | 76557476 | rs2469542 | - | A | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.566938 |
ETFA | chr15 | 76557551 | 76557551 | rs34840661 | + | - | -/G | insertion | intron | 2 | 1000GENOMES,ABI, | 2 | 0.934343 |
ETFA | chr15 | 76557552 | 76557553 | rs2456076 | + | T | G/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.544460 |
ETFA | chr15 | 76557554 | 76557555 | rs11856358 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,CSHL-HAPMAP,ENSEMBL,HGSV, | 2 | 0.944597 |
ETFA | chr15 | 76557554 | 76557555 | rs200473372 | + | C | -/C | deletion | intron | 2 | 1000GENOMES,ABI, | 2 | 0.054637 |
ETFA | chr15 | 76557896 | 76557897 | rs77539682 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.012631 |
ETFA | chr15 | 76557933 | 76557934 | rs79171859 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.012856 |
ETFA | chr15 | 76558142 | 76558143 | rs11072583 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.367229 |
ETFA | chr15 | 76558168 | 76558169 | rs2456077 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.017735 |
ETFA | chr15 | 76558490 | 76558491 | rs11072585 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.325787 |
ETFA | chr15 | 76558869 | 76558870 | rs2456078 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.177574 |
ETFA | chr15 | 76559481 | 76559482 | rs191390770 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
ETFA | chr15 | 76559605 | 76559606 | rs114969382 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.987369 |
ETFA | chr15 | 76559943 | 76559944 | rs74960895 | + | G | G/T | single | intron | 4 | 1000GENOMES,ENSEMBL,ILLUMINA,SSMP, | 2 | 0.957339 |
ETFA | chr15 | 76560264 | 76560265 | rs34893715 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.381976 |
ETFA | chr15 | 76561543 | 76561544 | rs4886788 | + | C | C/T | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.677829 |
ETFA | chr15 | 76561544 | 76561545 | rs191803651 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011019 |
ETFA | chr15 | 76562117 | 76562118 | rs2469541 | - | C | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.526661 |
ETFA | chr15 | 76562188 | 76562189 | rs78247410 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.016988 |
ETFA | chr15 | 76562737 | 76562738 | rs8042654 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,BL,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.095269 |
ETFA | chr15 | 76563477 | 76563478 | rs12592222 | + | T | C/T | single | intron | 5 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL,GMI,SSMP, | 2 | 0.031164 |
ETFA | chr15 | 76564066 | 76564067 | rs115292371 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.014373 |
ETFA | chr15 | 76564391 | 76564392 | rs77622645 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.016055 |
ETFA | chr15 | 76565025 | 76565026 | rs35707798 | + | G | C/G | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.387112 |
ETFA | chr15 | 76565602 | 76565603 | rs4886789 | + | G | A/G | single | intron | 12 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.355361 |
ETFA | chr15 | 76565715 | 76565716 | rs145934500 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.013774 |
ETFA | chr15 | 76565930 | 76565931 | rs114566574 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.973432 |
ETFA | chr15 | 76566068 | 76566068 | rs35093755 | + | - | -/A | insertion | intron | 8 | 1000GENOMES,ABI,BILGI_BIOE,GMI,HUMANGENOME_JCVI,LUNTER,SSMP,TISHKOFF, | 2 | 0.614679 |
ETFA | chr15 | 76566854 | 76566855 | rs2460160 | - | G | A/C | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,SC_JCM, | 2 | 0.010889 |
ETFA | chr15 | 76567137 | 76567138 | rs75809712 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
ETFA | chr15 | 76567141 | 76567142 | rs12442266 | + | T | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.384784 |
ETFA | chr15 | 76567327 | 76567328 | rs62027007 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.923395 |
ETFA | chr15 | 76567398 | 76567399 | rs182084708 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.023875 |
ETFA | chr15 | 76567483 | 76567484 | rs2469539 | - | A | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.108468 |
ETFA | chr15 | 76568208 | 76568209 | rs2456027 | + | G | A/G | single | intron | 12 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.230238 |
ETFA | chr15 | 76568397 | 76568398 | rs35771066 | + | T | A/T | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,SSMP, | 2 | 0.141812 |
ETFA | chr15 | 76568578 | 76568579 | rs2176623 | - | G | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.633833 |
ETFA | chr15 | 76568791 | 76568792 | rs55805818 | + | C | C/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.684235 |
ETFA | chr15 | 76568964 | 76568965 | rs57505558 | + | G | G/T | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,TISHKOFF, | 2 | 0.652294 |
ETFA | chr15 | 76568965 | 76568966 | rs56215269 | + | T | C/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.046373 |
ETFA | chr15 | 76568972 | 76568973 | rs60561507 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,TISHKOFF, | 2 | 0.336389 |
ETFA | chr15 | 76568974 | 76568977 | rs199816275 | + | TTT | -/TTT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.253444 |
ETFA | chr15 | 76568976 | 76568977 | rs55794488 | + | T | G/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,TISHKOFF, | 2 | 0.357012 |
ETFA | chr15 | 76569150 | 76569151 | rs72736888 | + | C | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.921772 |
ETFA | chr15 | 76569468 | 76569469 | rs115752468 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016115 |
ETFA | chr15 | 76569824 | 76569824 | rs35360285 | + | - | -/T | insertion | intron | 5 | 1000GENOMES,ABI,GMI,SSMP,TISHKOFF, | 2 | 0.865932 |
ETFA | chr15 | 76569914 | 76569915 | rs62027010 | + | C | A/C | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.076606 |
ETFA | chr15 | 76570142 | 76570143 | rs2469538 | - | C | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SC_JCM,SSMP,TISHKOFF, | 2 | 0.116812 |
ETFA | chr15 | 76570590 | 76570591 | rs2469537 | - | C | A/G | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.978951 |
ETFA | chr15 | 76570842 | 76570843 | rs2037306 | - | G | C/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.031567 |
ETFA | chr15 | 76571052 | 76571053 | rs11072587 | + | A | A/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.634305 |
ETFA | chr15 | 76571110 | 76571111 | rs7177769 | + | G | C/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.012393 |
ETFA | chr15 | 76571123 | 76571124 | rs1850722 | - | C | A/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,DEVINE_LAB,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.317379 |
ETFA | chr15 | 76571367 | 76571368 | rs59691037 | + | C | A/C | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.079817 |
ETFA | chr15 | 76571609 | 76571610 | rs8042255 | + | C | C/T | single | intron | 14 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.831241 |
ETFA | chr15 | 76571673 | 76571674 | rs11856470 | + | T | G/T | single | intron | 9 | 1000GENOMES,ABI,BL,CSHL-HAPMAP,ENSEMBL,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.079140 |
ETFA | chr15 | 76571858 | 76571871 | rs202185977 | + | CCTCCCACTTTGG | -/CCTCCCACTTTGG | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.028007 |
ETFA | chr15 | 76572985 | 76572986 | rs78540560 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.973868 |
ETFA | chr15 | 76574231 | 76574232 | rs12898415 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,SSAHASNP,TISHKOFF, | 2 | 0.624710 |
ETFA | chr15 | 76574627 | 76574628 | rs2469214 | + | G | A/G | single | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SC_JCM,SSMP,TISHKOFF, | 2 | 0.172157 |
ETFA | chr15 | 76575020 | 76575021 | rs17458234 | + | C | C/T | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.928700 |
ETFA | chr15 | 76575053 | 76575054 | rs2456030 | + | C | C/G | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.021057 |
ETFA | chr15 | 76575708 | 76575709 | rs6495199 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,WI_SSAHASNP, | 2 | 0.013502 |
ETFA | chr15 | 76576059 | 76576060 | rs78052129 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,NHLBI-ESP, | 2 | 0.968668 |
ETFA | chr15 | 76576633 | 76576634 | rs8040590 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WI_SSAHASNP, | 2 | 0.971560 |
ETFA | chr15 | 76576711 | 76576712 | rs114078184 | + | T | A/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027439 |
ETFA | chr15 | 76578383 | 76578384 | rs117401465 | + | C | A/C | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA,SSMP, | 2 | 0.023064 |
ETFA | chr15 | 76578996 | 76578997 | rs2456069 | - | C | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.984268 |
ETFA | chr15 | 76579089 | 76579090 | rs10519134 | + | G | A/G | single | intron | 9 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.049715 |
ETFA | chr15 | 76579233 | 76579234 | rs2291449 | + | A | A/G | single | intron | 8 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,GMI,KRIBB_YJKIM,PERLEGEN,SSMP,YUSUKE, | 2 | 0.956042 |
ETFA | chr15 | 76579285 | 76579286 | rs116391007 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.973868 |
ETFA | chr15 | 76579377 | 76579377 | rs147918951 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.975207 |
ETFA | chr15 | 76579535 | 76579536 | rs11631874 | + | G | G/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.669406 |
ETFA | chr15 | 76579663 | 76579664 | rs2469221 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.982265 |
ETFA | chr15 | 76580526 | 76580527 | rs8039063 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.645585 |
ETFA | chr15 | 76580546 | 76580547 | rs2456068 | - | C | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.978169 |
ETFA | chr15 | 76581197 | 76581198 | rs2469549 | - | C | A/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.976601 |
ETFA | chr15 | 76581367 | 76581368 | rs62027014 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.922936 |
ETFA | chr15 | 76581417 | 76581418 | rs2456067 | - | G | C/T | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.883135 |
ETFA | chr15 | 76581591 | 76581592 | rs12908334 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.615712 |
ETFA | chr15 | 76582741 | 76582742 | rs146840833 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016529 |
ETFA | chr15 | 76583007 | 76583008 | rs62027016 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.076606 |
ETFA | chr15 | 76583291 | 76583292 | rs56737606 | + | T | C/T | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.353480 |
ETFA | chr15 | 76583789 | 76583789 | rs200988812 | + | - | -/AG | insertion | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
ETFA | chr15 | 76583946 | 76583947 | rs2460150 | - | C | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.809763 |
ETFA | chr15 | 76584044 | 76584065 | rs201405241 | + | TGGCGCCACTGCACT | -/TGGCGCCACTGCA | deletion | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.033976 |
ETFA | chr15 | 76584686 | 76584686 | rs3215000 | + | - | -/A | insertion | intron | 12 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.585243 |
ETFA | chr15 | 76585788 | 76585789 | rs74026416 | + | A | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK, | 2 | 0.988543 |
ETFA | chr15 | 76585796 | 76585797 | rs75007725 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.987369 |
ETFA | chr15 | 76586332 | 76586332 | rs11384573 | + | - | -/A | insertion | intron | 9 | 1000GENOMES,BGI,BILGI_BIOE,DEVINE_LAB,GMI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.648760 |
ETFA | chr15 | 76586379 | 76586380 | rs74843424 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.026568 |
ETFA | chr15 | 76586982 | 76586983 | rs62027018 | + | A | A/C | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.646654 |
ETFA | chr15 | 76587157 | 76587158 | rs147769885 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.023875 |
ETFA | chr15 | 76587318 | 76587319 | rs8028504 | + | G | C/G | single | intron | 13 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.362699 |
ETFA | chr15 | 76587370 | 76587371 | rs2456066 | - | T | A/G | single | intron | 9 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.884666 |
ETFA | chr15 | 76587486 | 76587487 | rs8029637 | + | T | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.353825 |
ETFA | chr15 | 76587776 | 76587777 | rs3759853 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.631396 |
ETFA | chr15 | 76588321 | 76588322 | rs7173941 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.023875 |
ETFA | chr15 | 76588343 | 76588347 | rs199862952 | + | GCGT | -/GCGT | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.166208 |
ETFA | chr15 | 76588346 | 76588347 | rs2456065 | - | T | A/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP, | 2 | 0.065356 |
ETFA | chr15 | 76588805 | 76588806 | rs72736892 | + | T | C/T | single | intron | 4 | 1000GENOMES,BL,SSMP,TISHKOFF, | 2 | 0.080712 |
ETFA | chr15 | 76588853 | 76588854 | rs11633405 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.354631 |
ETFA | chr15 | 76589261 | 76589262 | rs4381566 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.610858 |
ETFA | chr15 | 76589278 | 76589279 | rs16968083 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.340131 |
ETFA | chr15 | 76589315 | 76589316 | rs7179750 | + | A | A/G | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.645189 |
ETFA | chr15 | 76589494 | 76589495 | rs7180462 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.349976 |
ETFA | chr15 | 76589766 | 76589767 | rs12907668 | + | A | A/T | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP, | 2 | 0.621894 |
ETFA | chr15 | 76589866 | 76589867 | rs55910716 | + | A | A/T | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,HGSV,SSMP, | 2 | 0.926639 |
ETFA | chr15 | 76590222 | 76590223 | rs116223507 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.970383 |
ETFA | chr15 | 76590401 | 76590403 | rs145669299 | + | GA | -/GA | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.307163 |
ETFA | chr15 | 76590407 | 76590408 | rs146303441 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010101 |
ETFA | chr15 | 76590564 | 76590565 | rs200388945 | + | G | -/G | deletion | intron | 1 | 1000GENOMES, | 2 | 0.010560 |
ETFA | chr15 | 76590849 | 76590850 | rs2456064 | - | G | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.028082 |
ETFA | chr15 | 76590944 | 76590945 | rs11854972 | + | G | A/G | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,CSHL-HAPMAP,ENSEMBL,HGSV,SSMP,TISHKOFF, | 2 | 0.073988 |
ETFA | chr15 | 76591085 | 76591086 | rs2469208 | + | C | C/G | single | intron | 23 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.120626 |
ETFA | chr15 | 76591109 | 76591110 | rs117143808 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.979112 |
ETFA | chr15 | 76591192 | 76591193 | rs8030454 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.634573 |
ETFA | chr15 | 76591273 | 76591274 | rs2460159 | + | C | C/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.016559 |
ETFA | chr15 | 76591356 | 76591357 | rs115302461 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027003 |
ETFA | chr15 | 76591819 | 76591820 | rs3991794 | - | T | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.646898 |
ETFA | chr15 | 76591886 | 76591887 | rs3958426 | - | G | C/T | single | intron | 12 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.646386 |
ETFA | chr15 | 76592048 | 76592049 | rs73453361 | + | G | A/G | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.073786 |
ETFA | chr15 | 76592667 | 76592668 | rs60261704 | + | C | A/C | single | intron | 5 | 1000GENOMES,BL,HGSV,SSMP,TISHKOFF, | 2 | 0.077815 |
ETFA | chr15 | 76592737 | 76592738 | rs11636278 | + | G | C/G | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.353346 |
ETFA | chr15 | 76593626 | 76593627 | rs79615818 | + | T | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027439 |
ETFA | chr15 | 76593639 | 76593640 | rs3915459 | + | G | G/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.647590 |
ETFA | chr15 | 76593653 | 76593654 | rs3915460 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.647210 |
ETFA | chr15 | 76593777 | 76593778 | rs62027019 | + | G | A/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BL,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.080734 |
ETFA | chr15 | 76593875 | 76593876 | rs3927263 | + | A | A/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.647894 |
ETFA | chr15 | 76593877 | 76593878 | rs3927264 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.647894 |
ETFA | chr15 | 76593999 | 76594000 | rs11857880 | + | G | A/G | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,BL,CSHL-HAPMAP,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.079285 |
ETFA | chr15 | 76594594 | 76594595 | rs74805465 | + | A | A/C | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.948165 |
ETFA | chr15 | 76594917 | 76594918 | rs59673486 | + | T | -/T | deletion | intron | 6 | 1000GENOMES,GMI,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.115243 |
ETFA | chr15 | 76594952 | 76594953 | rs3991793 | - | C | G/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.646386 |
ETFA | chr15 | 76595168 | 76595169 | rs80112208 | + | A | A/C | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.971715 |
ETFA | chr15 | 76595238 | 76595239 | rs3991792 | - | G | C/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.647301 |
ETFA | chr15 | 76595403 | 76595404 | rs62027047 | + | G | C/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.352752 |
ETFA | chr15 | 76595538 | 76595539 | rs62027048 | + | T | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.351835 |
ETFA | chr15 | 76595548 | 76595549 | rs2456063 | - | T | A/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.889060 |
ETFA | chr15 | 76595550 | 76595551 | rs12443449 | + | C | C/T | single | intron | 9 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,SSMP,TISHKOFF, | 2 | 0.645413 |
ETFA | chr15 | 76595715 | 76595716 | rs2469209 | + | A | A/G | single | intron | 21 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.026671 |
ETFA | chr15 | 76595860 | 76595861 | rs144886912 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.153811 |
ETFA | chr15 | 76596092 | 76596093 | rs117257475 | + | T | C/T | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.053090 |
ETFA | chr15 | 76596214 | 76596215 | rs4886486 | + | G | C/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.351327 |
ETFA | chr15 | 76596249 | 76596250 | rs4886791 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.681403 |
ETFA | chr15 | 76596489 | 76596490 | rs4886487 | + | A | A/G | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.647032 |
ETFA | chr15 | 76596532 | 76596532 | rs146031895 | + | - | -/A | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.975207 |
ETFA | chr15 | 76596699 | 76596700 | rs4886488 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.348352 |
ETFA | chr15 | 76597056 | 76597057 | rs2469210 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.547969 |
ETFA | chr15 | 76597252 | 76597253 | rs138139478 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.019743 |
ETFA | chr15 | 76597254 | 76597255 | rs113986711 | + | G | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.010092 |
ETFA | chr15 | 76597315 | 76597316 | rs2456062 | - | A | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.982216 |
ETFA | chr15 | 76598551 | 76598552 | rs61018254 | + | T | C/T | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,BGI,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.352294 |
ETFA | chr15 | 76598642 | 76598643 | rs2456061 | - | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP, | 2 | 0.970252 |
ETFA | chr15 | 76598693 | 76598694 | rs139997620 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.025253 |
ETFA | chr15 | 76598917 | 76598918 | rs11634796 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.670174 |
ETFA | chr15 | 76599040 | 76599041 | rs2956875 | + | A | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.884793 |
ETFA | chr15 | 76599269 | 76599273 | rs139997371 | + | CTCT | -/CTCT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.023875 |
ETFA | chr15 | 76599395 | 76599396 | rs79172652 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.024390 |
ETFA | chr15 | 76599500 | 76599503 | rs141739111 | + | TTC | -/TTC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.010101 |
ETFA | chr15 | 76599524 | 76599525 | rs2460156 | + | G | A/G | single | intron | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM, | 2 | 0.013444 |
ETFA | chr15 | 76599600 | 76599601 | rs2460157 | + | G | G/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.017743 |
ETFA | chr15 | 76599828 | 76599829 | rs57149671 | + | C | -/C | deletion | intron | 4 | 1000GENOMES,HGSV,LUNTER,SSMP, | 2 | 0.078053 |
ETFA | chr15 | 76599891 | 76599892 | rs2469211 | + | A | A/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.885481 |
ETFA | chr15 | 76599915 | 76599916 | rs11634060 | + | T | C/T | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.364302 |
ETFA | chr15 | 76599994 | 76599994 | rs139280317 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,BL,LUNTER, | 2 | 0.910468 |
ETFA | chr15 | 76600221 | 76600222 | rs2460158 | + | A | A/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP, | 2 | 0.852096 |
ETFA | chr15 | 76600630 | 76600631 | rs2469572 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.021806 |
ETFA | chr15 | 76600853 | 76600854 | rs73453374 | + | A | A/G | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.926214 |
ETFA | chr15 | 76600914 | 76600914 | rs142574858 | + | - | -/C | insertion | intron | 3 | 1000GENOMES,LUNTER,TISHKOFF, | 2 | 0.975207 |
ETFA | chr15 | 76601048 | 76601049 | rs2469573 | + | T | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.130952 |
ETFA | chr15 | 76601074 | 76601075 | rs2469212 | + | A | A/C | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.866300 |
ETFA | chr15 | 76601215 | 76601216 | rs77197552 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.974303 |
ETFA | chr15 | 76601515 | 76601516 | rs2056251 | - | C | A/G | single | intron | 18 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.543508 |
ETFA | chr15 | 76601870 | 76601871 | rs17361504 | + | A | A/G | single | intron | 14 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.618816 |
ETFA | chr15 | 76602043 | 76602044 | rs78977445 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.013502 |
ETFA | chr15 | 76602130 | 76602131 | rs2469574 | + | T | C/T | single | intron | 20 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.965561 |
ETFA | chr15 | 76602211 | 76602212 | rs2404972 | - | G | C/T | single | intron | 12 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BGI,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.637807 |
ETFA | chr15 | 76602345 | 76602346 | rs2404971 | - | G | C/T | single | intron | 5 | 1000GENOMES,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.872018 |
ETFA | chr15 | 76602489 | 76602490 | rs11631935 | + | G | A/G | single | intron | 3 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL, | 2 | 0.013303 |
ETFA | chr15 | 76602613 | 76602618 | rs150922545 | + | AAACA | -/AAACA | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.016070 |
ETFA | chr15 | 76602936 | 76602937 | rs12439484 | + | A | A/C | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 3 | 0.614859 |
ETFA | chr15 | 76603163 | 76603164 | rs56372945 | + | A | A/G | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.869963 |
ETFA | chr15 | 76603168 | 76603169 | rs57217518 | + | T | C/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,HGSV,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.103575 |
ETFA | chr15 | 76603338 | 76603339 | rs114715150 | + | C | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.027439 |
ETFA | chr15 | 76603456 | 76603457 | rs118111581 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989121 |
ETFA | chr15 | 76603610 | 76603611 | rs3215142 | + | A | -/A | deletion | intron | 7 | 1000GENOMES,BL,GMI,LUNTER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.292470 |
ETFA | chr15 | 76603678 | 76603679 | rs62027051 | + | G | C/G | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.132326 |
IVD | chr15 | 40698227 | 40698228 | rs111440850 | + | A | A/G | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.981643 |
IVD | chr15 | 40698805 | 40698805 | rs112373695 | + | - | -/G | insertion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,LUNTER,SSMP,TISHKOFF, | 2 | 0.890367 |
IVD | chr15 | 40698923 | 40698924 | rs116696916 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010017 |
IVD | chr15 | 40698975 | 40698976 | rs73383129 | + | G | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.984862 |
IVD | chr15 | 40699372 | 40699373 | rs1984793 | + | C | A/C | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.650148 |
IVD | chr15 | 40699726 | 40699727 | rs80175544 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010017 |
IVD | chr15 | 40699839 | 40699840 | rs34695403 | + | C | C/G/T | single | intron,missense | 4 | APPLERA_GI,ILLUMINA,NHLBI-ESP,OMIM-CURATED-RECORDS, | 2 | 0.986842 |
IVD | chr15 | 40699939 | 40699940 | rs2289331 | - | T | A/G | single | intron | 20 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.342334 |
IVD | chr15 | 40700021 | 40700022 | rs10518693 | + | C | C/T | single | intron | 17 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.542650 |
IVD | chr15 | 40700069 | 40700070 | rs76137091 | + | T | C/T | single | intron | 2 | 1000GENOMES,NHLBI-ESP, | 2 | 0.010017 |
IVD | chr15 | 40700119 | 40700120 | rs78272986 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,NHLBI-ESP, | 2 | 0.010453 |
IVD | chr15 | 40700482 | 40700483 | rs68169695 | + | T | G/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.108257 |
IVD | chr15 | 40700593 | 40700594 | rs114794219 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989547 |
IVD | chr15 | 40700674 | 40700675 | rs80084737 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989983 |
IVD | chr15 | 40700766 | 40700767 | rs16970660 | + | G | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.085766 |
IVD | chr15 | 40701633 | 40701634 | rs56793772 | + | C | C/G | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,HGSV,TISHKOFF, | 2 | 0.981210 |
IVD | chr15 | 40701965 | 40701966 | rs73383135 | + | G | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.116300 |
IVD | chr15 | 40702037 | 40702038 | rs112391853 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,GMI, | 2 | 0.133028 |
IVD | chr15 | 40702037 | 40702037 | rs202230027 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.858127 |
IVD | chr15 | 40702195 | 40702196 | rs34321039 | + | C | C/T | single | intron | 6 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.964286 |
IVD | chr15 | 40702255 | 40702256 | rs4244578 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.307306 |
IVD | chr15 | 40702269 | 40702270 | rs4924464 | + | C | C/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.682068 |
IVD | chr15 | 40702286 | 40702287 | rs4924465 | + | A | A/G | single | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.254902 |
IVD | chr15 | 40702293 | 40702294 | rs4244579 | + | C | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.265418 |
IVD | chr15 | 40702508 | 40702509 | rs72733442 | + | T | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.093034 |
IVD | chr15 | 40702600 | 40702601 | rs74763151 | + | T | C/T | single | intron | 3 | 1000GENOMES,BGI,SSMP, | 2 | 0.011749 |
IVD | chr15 | 40703113 | 40703114 | rs8033938 | + | A | A/G | single | intron | 8 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,HGSV,PERLEGEN,PJP,SSMP,WI_SSAHASNP, | 2 | 0.940598 |
IVD | chr15 | 40703122 | 40703123 | rs113720703 | + | A | A/C | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.985335 |
IVD | chr15 | 40703200 | 40703201 | rs76063119 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.986934 |
IVD | chr15 | 40703210 | 40703211 | rs9635324 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.530116 |
IVD | chr15 | 40703242 | 40703243 | rs73383142 | + | T | A/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.014665 |
IVD | chr15 | 40703338 | 40703339 | rs8034416 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.348708 |
IVD | chr15 | 40703608 | 40703609 | rs4924466 | + | A | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.022997 |
IVD | chr15 | 40703689 | 40703690 | rs8039298 | + | G | C/G | single | intron | 2 | 1000GENOMES,WI_SSAHASNP, | 2 | 0.012702 |
IVD | chr15 | 40703694 | 40703695 | rs74011152 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.983945 |
IVD | chr15 | 40704012 | 40704013 | rs73383148 | + | G | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.985335 |
IVD | chr15 | 40704393 | 40704394 | rs12440317 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.224439 |
IVD | chr15 | 40704596 | 40704597 | rs74659386 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986063 |
IVD | chr15 | 40705104 | 40705105 | rs2289330 | - | A | C/T | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.697005 |
IVD | chr15 | 40705158 | 40705159 | rs2289329 | - | T | A/G | single | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.550768 |
IVD | chr15 | 40705351 | 40705352 | rs73385108 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.976627 |
IVD | chr15 | 40705416 | 40705417 | rs2289328 | - | G | C/T | single | intron | 13 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,YUSUKE, | 2 | 0.898093 |
IVD | chr15 | 40705740 | 40705741 | rs73385110 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.976147 |
IVD | chr15 | 40705774 | 40705775 | rs114297147 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985192 |
IVD | chr15 | 40705863 | 40705863 | rs200207728 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.970615 |
IVD | chr15 | 40705878 | 40705882 | rs148431196 | + | TTTG | -/TTTG | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.638659 |
IVD | chr15 | 40705910 | 40705911 | rs143235545 | + | A | A/C | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986685 |
IVD | chr15 | 40706013 | 40706014 | rs111758723 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.977982 |
IVD | chr15 | 40706100 | 40706101 | rs113638727 | + | C | C/G | single | intron | 4 | 1000GENOMES,BCM-HGSC-SUB,BL,SSMP, | 2 | 0.941274 |
IVD | chr15 | 40706243 | 40706244 | rs34870475 | + | G | C/G | single | intron | 6 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,TISHKOFF, | 2 | 0.019248 |
IVD | chr15 | 40706409 | 40706410 | rs73385112 | + | C | C/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.984862 |
IVD | chr15 | 40706544 | 40706545 | rs73385114 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.975688 |
IVD | chr15 | 40706666 | 40706667 | rs9672893 | + | G | C/G | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.033282 |
IVD | chr15 | 40707455 | 40707456 | rs875767 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.891736 |
IVD | chr15 | 40707883 | 40707884 | rs112852617 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013761 |
IVD | chr15 | 40708421 | 40708422 | rs11070270 | + | A | A/G | single | intron | 18 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.367098 |
IVD | chr15 | 40708454 | 40708455 | rs113309937 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.050000 |
IVD | chr15 | 40708483 | 40708484 | rs115077254 | + | C | C/T | single | intron | 6 | 1000GENOMES,GMI,ILLUMINA,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.973510 |
IVD | chr15 | 40708638 | 40708639 | rs78717580 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.012195 |
IVD | chr15 | 40708643 | 40708644 | rs112366697 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,SSMP, | 2 | 0.940383 |
IVD | chr15 | 40708700 | 40708701 | rs111540938 | + | C | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,SSMP, | 2 | 0.942202 |
IVD | chr15 | 40709334 | 40709335 | rs149653163 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.022498 |
IVD | chr15 | 40709359 | 40709360 | rs111870720 | + | G | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.014220 |
IVD | chr15 | 40709403 | 40709403 | rs200004085 | + | - | -/G | insertion | intron | 1 | 1000GENOMES, | 2 | 0.974747 |
IVD | chr15 | 40709428 | 40709429 | rs112571916 | + | G | A/G | single | intron | 3 | 1000GENOMES,BL,COMPLETE_GENOMICS, | 2 | 0.070183 |
IVD | chr15 | 40709574 | 40709575 | rs148359169 | + | T | C/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.088154 |
IVD | chr15 | 40709578 | 40709579 | rs7172000 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM_SSAHASNP,BL,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.911468 |
IVD | chr15 | 40709685 | 40709686 | rs2412523 | + | C | C/G | single | intron | 17 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.341697 |
IVD | chr15 | 40710100 | 40710101 | rs11070271 | + | G | G/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.482900 |
IVD | chr15 | 40710107 | 40710108 | rs11638033 | + | A | A/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.547032 |
IVD | chr15 | 40710150 | 40710151 | rs59636068 | + | C | A/C | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.023853 |
DHODH | chr16 | 72042824 | 72042825 | rs3213423 | + | T | G/T | single | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.875822 |
DHODH | chr16 | 72042959 | 72042960 | rs113616219 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.015138 |
DHODH | chr16 | 72042994 | 72042995 | rs113000464 | + | C | A/C | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.015138 |
DHODH | chr16 | 72043038 | 72043039 | rs4788597 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.512125 |
DHODH | chr16 | 72043287 | 72043288 | rs182289896 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.033976 |
DHODH | chr16 | 72043343 | 72043344 | rs187293195 | + | G | C/G | single | intron | 1 | 1000GENOMES, | 2 | 0.018366 |
DHODH | chr16 | 72043352 | 72043353 | rs140629801 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.039486 |
DHODH | chr16 | 72043545 | 72043546 | rs12149380 | + | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP, | 2 | 0.846715 |
DHODH | chr16 | 72044004 | 72044005 | rs2052579 | - | A | C/T | single | intron | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.969986 |
DHODH | chr16 | 72044237 | 72044238 | rs4788598 | + | G | C/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.466437 |
DHODH | chr16 | 72044494 | 72044495 | rs61302939 | + | T | C/T | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA,ILLUMINA-UK, | 2 | 0.018807 |
DHODH | chr16 | 72044646 | 72044647 | rs186136040 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.011938 |
DHODH | chr16 | 72044923 | 72044924 | rs11326070 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,DEVINE_LAB,LUNTER,SSMP,TISHKOFF, | 2 | 0.089991 |
DHODH | chr16 | 72045185 | 72045186 | rs2878404 | - | T | A/G | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.598610 |
DHODH | chr16 | 72045436 | 72045437 | rs28483075 | + | G | C/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,SSAHASNP, | 2 | 0.031651 |
DHODH | chr16 | 72045762 | 72045765 | rs199731139 | + | GAA | -/GAA | deletion | intron | 3 | 1000GENOMES,BILGI_BIOE,SSMP, | 2 | 0.020202 |
DHODH | chr16 | 72045786 | 72045787 | rs144600696 | + | T | A/T | single | intron | 2 | 1000GENOMES,WARNICH_LAB, | 2 | 0.010560 |
DHODH | chr16 | 72046200 | 72046201 | rs113393105 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.014220 |
DHODH | chr16 | 72046210 | 72046211 | rs8057016 | + | G | G/T | single | intron | 14 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.889571 |
DHODH | chr16 | 72046267 | 72046268 | rs1465457 | - | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.405457 |
DHODH | chr16 | 72046304 | 72046305 | rs8058214 | + | T | G/T | single | intron | 12 | 1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.110712 |
DHODH | chr16 | 72046460 | 72046461 | rs8061140 | + | A | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.901268 |
DHODH | chr16 | 72046476 | 72046477 | rs8061292 | + | C | A/C | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA,WI_SSAHASNP, | 2 | 0.035714 |
DHODH | chr16 | 72046679 | 72046680 | rs111665880 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.970183 |
DHODH | chr16 | 72047061 | 72047064 | rs67332755 | + | TCT | -/TCT | deletion | intron | 4 | 1000GENOMES,DEVINE_LAB,LUNTER,SSMP, | 2 | 0.098255 |
DHODH | chr16 | 72047107 | 72047109 | rs66927897 | + | CT | -/CT | deletion | intron | 3 | 1000GENOMES,DEVINE_LAB,LUNTER, | 2 | 0.031221 |
DHODH | chr16 | 72047169 | 72047170 | rs752434 | - | T | A/G/T | single | intron | 18 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SEQUENOM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 4 | 0.475914 |
DHODH | chr16 | 72047285 | 72047286 | rs4788456 | + | G | A/G | single | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.400947 |
DHODH | chr16 | 72047498 | 72047499 | rs16973619 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,COMPLETE_GENOMICS,PERLEGEN, | 2 | 0.964260 |
DHODH | chr16 | 72047750 | 72047751 | rs8046916 | + | C | C/G | single | intron | 21 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.058901 |
DHODH | chr16 | 72047848 | 72047849 | rs78383425 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.970642 |
DHODH | chr16 | 72048079 | 72048080 | rs4788600 | + | G | G/T | single | intron | 17 | 1000GENOMES,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.489891 |
DHODH | chr16 | 72048331 | 72048332 | rs3764310 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.383809 |
DHODH | chr16 | 72048631 | 72048632 | rs8062895 | + | A | A/G | single | intron | 14 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.612483 |
DHODH | chr16 | 72048754 | 72048755 | rs190857490 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.988522 |
DHODH | chr16 | 72049211 | 72049212 | rs7184117 | + | G | G/T | single | intron | 8 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP, | 2 | 0.891320 |
DHODH | chr16 | 72049620 | 72049621 | rs3812988 | - | T | A/G | single | intron | 20 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.109939 |
DHODH | chr16 | 72049797 | 72049798 | rs78356840 | + | G | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.029358 |
DHODH | chr16 | 72049798 | 72049799 | rs8048262 | + | A | A/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.595696 |
DHODH | chr16 | 72049884 | 72049887 | rs150303975 | + | TAT | -/TAT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.028926 |
DHODH | chr16 | 72050479 | 72050480 | rs11864453 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.629961 |
DHODH | chr16 | 72050505 | 72050506 | rs73586368 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.935410 |
DHODH | chr16 | 72050884 | 72050885 | rs11075914 | + | G | C/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,NHLBI-ESP,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 1.000000 |
DHODH | chr16 | 72050903 | 72050904 | rs2278028 | - | G | C/T | single | intron | 7 | 1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SSMP,YUSUKE, | 2 | 0.976472 |
DHODH | chr16 | 72051368 | 72051369 | rs2278027 | - | A | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.374829 |
DHODH | chr16 | 72051772 | 72051773 | rs11865639 | + | C | C/G | single | intron | 6 | 1000GENOMES,BUSHMAN,CSHL-HAPMAP,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.980311 |
DHODH | chr16 | 72051982 | 72051983 | rs116851654 | + | T | G/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.016971 |
DHODH | chr16 | 72052007 | 72052008 | rs34273235 | + | G | -/G | deletion | intron | 10 | 1000GENOMES,ABI,BL,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.472018 |
DHODH | chr16 | 72052033 | 72052034 | rs11647889 | + | C | C/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,CSHL-HAPMAP,SSMP,TISHKOFF, | 2 | 0.927064 |
DHODH | chr16 | 72052298 | 72052299 | rs75329497 | + | A | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.834404 |
DHODH | chr16 | 72052347 | 72052348 | rs11648003 | + | A | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP, | 2 | 0.805759 |
DHODH | chr16 | 72052364 | 72052365 | rs8061439 | + | G | C/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,PERLEGEN,WI_SSAHASNP, | 2 | 0.030603 |
DHODH | chr16 | 72052624 | 72052625 | rs8045316 | + | G | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,WI_SSAHASNP, | 2 | 0.044989 |
DHODH | chr16 | 72052890 | 72052891 | rs10048144 | + | C | C/G | single | intron | 16 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.454877 |
DHODH | chr16 | 72052956 | 72052957 | rs111993259 | + | C | C/T | single | intron | 4 | 1000GENOMES,BUSHMAN,SSMP,TISHKOFF, | 2 | 0.971088 |
DHODH | chr16 | 72052967 | 72052968 | rs112506454 | + | T | G/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.032110 |
DHODH | chr16 | 72053140 | 72053141 | rs10048111 | + | T | C/T | single | intron | 14 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.490868 |
DHODH | chr16 | 72053913 | 72053914 | rs113348449 | + | C | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.888176 |
DHODH | chr16 | 72054051 | 72054052 | rs112128680 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF, | 2 | 0.076147 |
DHODH | chr16 | 72054065 | 72054066 | rs141305769 | + | T | G/T | single | intron | 3 | 1000GENOMES,SSMP,TISHKOFF, | 2 | 0.074839 |
DHODH | chr16 | 72054200 | 72054200 | rs200480530 | + | - | -/TA | insertion | intron | 1 | 1000GENOMES, | 2 | 0.958678 |
DHODH | chr16 | 72054617 | 72054618 | rs76575311 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.970183 |
DHODH | chr16 | 72054927 | 72054928 | rs118112818 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986510 |
DHODH | chr16 | 72054983 | 72054984 | rs1862752 | - | G | A/C | single | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.482227 |
DHODH | chr16 | 72055335 | 72055336 | rs56387295 | + | C | A/C | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.066972 |
DHODH | chr16 | 72055531 | 72055532 | rs2081223 | - | A | G/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.530724 |
DHODH | chr16 | 72055648 | 72055649 | rs2081222 | - | A | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.598993 |
DHODH | chr16 | 72055855 | 72055856 | rs74803415 | + | G | A/G | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.164070 |
DHODH | chr16 | 72056383 | 72056384 | rs114267707 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.015244 |
DHODH | chr16 | 72056756 | 72056757 | rs12446480 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.567204 |
DHODH | chr16 | 72057281 | 72057282 | rs2288002 | - | A | C/T | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.528989 |
GFER | chr16 | 2034660 | 2034661 | rs2075812 | + | T | C/T | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,HGBASE,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SSMP,YUSUKE, | 2 | 0.419587 |
GFER | chr16 | 2035252 | 2035253 | rs34973300 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM, | 2 | 0.044633 |
GFER | chr16 | 2035295 | 2035296 | rs72766612 | + | C | A/C | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BL,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.105963 |
GFER | chr16 | 2035389 | 2035390 | rs2075813 | + | G | A/G | single | intron | 7 | 1000GENOMES,GMI,HGBASE,ILLUMINA,KRIBB_YJKIM,SSMP,YUSUKE, | 2 | 0.032890 |
GFER | chr16 | 2035414 | 2035415 | rs2072684 | + | G | C/G | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.448697 |
GFER | chr16 | 2035613 | 2035614 | rs61572004 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,HGSV,TISHKOFF, | 2 | 0.050871 |
GFER | chr16 | 2035761 | 2035762 | rs72766613 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.105963 |
GFER | chr16 | 2035783 | 2035784 | rs72766615 | + | C | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF, | 2 | 0.887615 |
ACADVL | chr17 | 7121104 | 7121105 | rs72839706 | + | C | A/C | single | coding-synon,intron,near-gene-5 | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.020017 |
ACADVL | chr17 | 7121538 | 7121539 | rs41283399 | + | C | C/T | single | intron,near-gene-5 | 6 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SI_EXO,TISHKOFF, | 2 | 0.980941 |
ACADVL | chr17 | 7121784 | 7121785 | rs2521985 | + | T | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SI_EXO,SSMP,TISHKOFF, | 2 | 0.692197 |
ACADVL | chr17 | 7122339 | 7122340 | rs41283401 | + | G | A/G | single | intron,near-gene-5,untranslated-5 | 4 | 1000GENOMES,ILLUMINA,SI_EXO,TISHKOFF, | 2 | 0.018712 |
ACADVL | chr17 | 7122376 | 7122377 | rs739669 | + | G | A/G | single | intron,near-gene-5,untranslated-5 | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KYUGEN,PJP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.715864 |
ACADVL | chr17 | 7122561 | 7122562 | rs73976748 | + | G | A/G | single | intron,near-gene-5,untranslated-5 | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.071101 |
ACADVL | chr17 | 7122623 | 7122624 | rs2017365 | + | G | A/G | single | intron,near-gene-5,untranslated-5 | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,KYUGEN,PJP,SI_EXO,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.490992 |
ACADVL | chr17 | 7122827 | 7122828 | rs41283403 | + | C | C/T | single | intron,near-gene-5,untranslated-5 | 4 | 1000GENOMES,ILLUMINA,SI_EXO,TISHKOFF, | 2 | 0.975579 |
ACADVL | chr17 | 7122955 | 7122956 | rs79809891 | + | G | A/G | single | intron,near-gene-5,untranslated-5 | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.027003 |
ACADVL | chr17 | 7123009 | 7123010 | rs79281055 | + | C | C/T | single | intron,near-gene-5,untranslated-5 | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.986498 |
ACADVL | chr17 | 7123240 | 7123240 | rs421019 | - | - | A/G | single | intron,untranslated-5 | 2 | SC_JCM,SEQUENOM, | 2 | 0.750000 |
ACADVL | chr17 | 7123351 | 7123352 | rs2230179 | + | C | C/T | single | intron,missense,untranslated-5 | 9 | 1000GENOMES,APPLERA_GI,CGAP-GAI,EXOME_CHIP,GENEREVIEWS,ILLUMINA,NHLBI-ESP,TISHKOFF,WICVAR, | 2 | 0.976632 |
ACADVL | chr17 | 7123614 | 7123615 | rs77289756 | + | T | G/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.033101 |
ACADVL | chr17 | 7123837 | 7123838 | rs28934585 | + | C | C/T | single | intron,near-gene-5,missense,untranslated-5 | 11 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,GENEREVIEWS,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,OMICIA,PERLEGEN,SEATTLESEQ, | 2 | 0.970896 |
ACADVL | chr17 | 7124505 | 7124506 | rs77680021 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.041775 |
ACADVL | chr17 | 7124687 | 7124688 | rs8074626 | + | C | A/C | single | intron,near-gene-5 | 4 | 1000GENOMES,COMPLETE_GENOMICS,TISHKOFF,WI_SSAHASNP, | 2 | 0.020015 |
ACADVL | chr17 | 7124790 | 7124791 | rs76640635 | + | A | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,ENSEMBL, | 2 | 0.975252 |
ACADVL | chr17 | 7124834 | 7124836 | rs60400822 | + | CA | -/CA | deletion | intron,near-gene-5 | 5 | 1000GENOMES,HGSV,LUNTER,TISHKOFF,WARNICH_LAB, | 2 | 0.066575 |
ACADVL | chr17 | 7125077 | 7125078 | rs76224236 | + | T | C/T | single | intron,near-gene-5 | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.012185 |
ACADVL | chr17 | 7125215 | 7125216 | rs79120091 | + | G | A/G | single | intron,near-gene-5 | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.024826 |
ACADVL | chr17 | 7125653 | 7125654 | rs145589195 | + | T | G/T | single | intron | 4 | 1000GENOMES,CLINSEQ_SNP,NHLBI-ESP,SSMP, | 2 | 0.011512 |
ACADVL | chr17 | 7125826 | 7125827 | rs74562836 | + | C | C/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.988686 |
ACADVL | chr17 | 7125904 | 7125905 | rs116038940 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.975610 |
ACADVL | chr17 | 7125935 | 7125936 | rs11870841 | + | G | G/T | single | intron | 5 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL,ILLUMINA,NHLBI-ESP, | 2 | 0.975710 |
ACADVL | chr17 | 7127717 | 7127718 | rs17671352 | + | T | C/T | single | intron,near-gene-5 | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,NHLBI-ESP,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.529262 |
ACOX1 | chr17 | 73942962 | 73942963 | rs28590720 | + | T | G/T | single | intron | 3 | 1000GENOMES,SSAHASNP,SSMP, | 2 | 0.039735 |
ACOX1 | chr17 | 73942975 | 73942976 | rs2666003 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.432088 |
ACOX1 | chr17 | 73943067 | 73943068 | rs28395254 | + | G | A/G | single | intron | 3 | 1000GENOMES,SSAHASNP,SSMP, | 2 | 0.038493 |
ACOX1 | chr17 | 73943070 | 73943071 | rs28496893 | + | T | G/T | single | intron | 3 | 1000GENOMES,SSAHASNP,SSMP, | 2 | 0.038493 |
ACOX1 | chr17 | 73943349 | 73943350 | rs2168855 | - | C | A/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,GMI,HGSV,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.192308 |
ACOX1 | chr17 | 73943397 | 73943398 | rs147326228 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.021120 |
ACOX1 | chr17 | 73943570 | 73943571 | rs148844589 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.953627 |
ACOX1 | chr17 | 73943941 | 73943942 | rs1463486 | - | G | C/T | single | intron | 10 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,GMI,HGSV,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.807868 |
ACOX1 | chr17 | 73944568 | 73944569 | rs12051891 | + | A | A/C | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.890060 |
ACOX1 | chr17 | 73944595 | 73944596 | rs2666005 | + | T | G/T | single | intron | 11 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.234218 |
ACOX1 | chr17 | 73944889 | 73944890 | rs76447063 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.927264 |
ACOX1 | chr17 | 73944933 | 73944937 | rs200821416 | + | TTTC | -/TTTC | deletion | intron | 3 | 1000GENOMES,LUNTER,SSMP, | 2 | 0.109275 |
ACOX1 | chr17 | 73944985 | 73944986 | rs113620479 | + | G | A/G | single | intron | 6 | 1000GENOMES,BL,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.108765 |
ACOX1 | chr17 | 73945236 | 73945237 | rs8079543 | + | A | A/G | single | intron | 8 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA-UK,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.926417 |
ACOX1 | chr17 | 73945528 | 73945529 | rs8082018 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.093474 |
ACOX1 | chr17 | 73945744 | 73945745 | rs9901420 | + | T | C/T | single | intron | 10 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF, | 2 | 0.059827 |
ACOX1 | chr17 | 73946602 | 73946603 | rs138269925 | + | T | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016070 |