Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
SUGCT | chr7 | 40781495 | 40781496 | rs116282987 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987603 |
SUGCT | chr7 | 40782023 | 40782024 | rs3857748 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.478082 |
SUGCT | chr7 | 40782421 | 40782422 | rs17171773 | + | C | C/T | single | intron | 6 | 1000GENOMES,AFFY,GMI,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.979280 |
SUGCT | chr7 | 40782571 | 40782572 | rs10499617 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,AFFY,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.066047 |
SUGCT | chr7 | 40783023 | 40783024 | rs114385327 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.975174 |
SUGCT | chr7 | 40783072 | 40783073 | rs80271582 | + | G | C/G | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.037859 |
SUGCT | chr7 | 40783175 | 40783176 | rs4720372 | + | T | G/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP,WI_SSAHASNP, | 2 | 0.035027 |
SUGCT | chr7 | 40783532 | 40783533 | rs4723975 | + | A | A/T | single | intron | 9 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.951737 |
SUGCT | chr7 | 40783623 | 40783624 | rs7794957 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.050964 |
SUGCT | chr7 | 40783806 | 40783807 | rs7795257 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BUSHMAN,CSHL-HAPMAP,PJP,WI_SSAHASNP, | 2 | 0.011927 |
SUGCT | chr7 | 40783905 | 40783906 | rs7781779 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BGI,BUSHMAN,CSHL-HAPMAP,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.046512 |
SUGCT | chr7 | 40785316 | 40785317 | rs10229743 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,WUGSC_SSAHASNP, | 2 | 0.013781 |
SUGCT | chr7 | 40786249 | 40786249 | rs147436292 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.980257 |
SUGCT | chr7 | 40786931 | 40786932 | rs7778021 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.637900 |
SUGCT | chr7 | 40787103 | 40787104 | rs17438725 | + | T | C/T | single | intron | 7 | 1000GENOMES,AFFY,GMI,HGSV,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.067320 |
SUGCT | chr7 | 40787383 | 40787383 | rs200244015 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
SUGCT | chr7 | 40787864 | 40787865 | rs77788648 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.028285 |
SUGCT | chr7 | 40788080 | 40788081 | rs56243010 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.932571 |
SUGCT | chr7 | 40788313 | 40788314 | rs144916205 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.015151 |
SUGCT | chr7 | 40788746 | 40788747 | rs12532716 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PERLEGEN,SSMP, | 2 | 0.036670 |
SUGCT | chr7 | 40788804 | 40788805 | rs12667729 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.041547 |
SUGCT | chr7 | 40789893 | 40789894 | rs10228025 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.380554 |
SUGCT | chr7 | 40790256 | 40790257 | rs6970061 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCM_SSAHASNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.628292 |
SUGCT | chr7 | 40790381 | 40790382 | rs6970230 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.878230 |
SUGCT | chr7 | 40791539 | 40791540 | rs17171774 | + | C | C/G | single | intron | 14 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.449293 |
SUGCT | chr7 | 40791859 | 40791860 | rs78580930 | + | T | G/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.037190 |
SUGCT | chr7 | 40791883 | 40791884 | rs59480061 | + | T | A/T | single | intron | 4 | 1000GENOMES,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.011468 |
SUGCT | chr7 | 40792003 | 40792004 | rs10265533 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.451097 |
SUGCT | chr7 | 40793090 | 40793091 | rs10240804 | + | G | A/G | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.311070 |
SUGCT | chr7 | 40793557 | 40793558 | rs3857749 | + | G | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.544440 |
SUGCT | chr7 | 40793695 | 40793696 | rs3857750 | + | G | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.536109 |
SUGCT | chr7 | 40793719 | 40793720 | rs6948947 | + | A | A/G | single | intron | 6 | 1000GENOMES,BCM_SSAHASNP,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.934565 |
SUGCT | chr7 | 40794524 | 40794525 | rs4723977 | + | A | A/T | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.468750 |
SUGCT | chr7 | 40795111 | 40795112 | rs17529882 | + | A | A/G | single | intron | 6 | 1000GENOMES,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.933814 |
SUGCT | chr7 | 40795199 | 40795200 | rs17439106 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,PERLEGEN,SSMP, | 2 | 0.933528 |
SUGCT | chr7 | 40796469 | 40796470 | rs12701830 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.466545 |
SUGCT | chr7 | 40796617 | 40796618 | rs1921752 | + | G | A/G | single | intron | 19 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,EXOME_CHIP,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.528100 |
SUGCT | chr7 | 40796625 | 40796626 | rs76104208 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962810 |
SUGCT | chr7 | 40796735 | 40796736 | rs766317 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.551020 |
SUGCT | chr7 | 40796888 | 40796889 | rs73125725 | + | G | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP, | 2 | 0.021540 |
SUGCT | chr7 | 40797218 | 40797219 | rs7802357 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.462597 |
SUGCT | chr7 | 40797447 | 40797448 | rs7802894 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.307516 |
SUGCT | chr7 | 40798034 | 40798035 | rs77041507 | + | A | A/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.961706 |
SUGCT | chr7 | 40798097 | 40798098 | rs17171779 | + | T | C/T | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.037565 |
SUGCT | chr7 | 40798148 | 40798149 | rs11981180 | + | A | A/G | single | intron | 9 | 1000GENOMES,AFFY,BGI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP, | 2 | 0.959249 |
SUGCT | chr7 | 40798266 | 40798267 | rs976829 | + | C | C/T | single | intron | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.010483 |
SUGCT | chr7 | 40798625 | 40798626 | rs79207887 | + | G | G/T | single | intron | 4 | 1000GENOMES,BL,ILLUMINA,SSMP, | 2 | 0.963990 |
SUGCT | chr7 | 40799171 | 40799172 | rs28521430 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.540219 |
SUGCT | chr7 | 40799176 | 40799177 | rs77874948 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40799889 | 40799890 | rs75081397 | + | T | C/T | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.038907 |
SUGCT | chr7 | 40800051 | 40800052 | rs1203736 | + | C | A/C/G | single | intron | 20 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 3 | 0.000912 |
SUGCT | chr7 | 40800495 | 40800496 | rs78944381 | + | C | C/T | single | intron | 4 | 1000GENOMES,BL,ILLUMINA,SSMP, | 2 | 0.959023 |
SUGCT | chr7 | 40801002 | 40801003 | rs12540647 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.963269 |
SUGCT | chr7 | 40801430 | 40801431 | rs12540736 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40801476 | 40801477 | rs12538260 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,ILLUMINA,SSMP, | 2 | 0.033074 |
SUGCT | chr7 | 40801626 | 40801627 | rs77229410 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.039600 |
SUGCT | chr7 | 40801871 | 40801872 | rs7796990 | + | G | A/G | single | intron | 16 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.490246 |
SUGCT | chr7 | 40801951 | 40801952 | rs143689207 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012856 |
SUGCT | chr7 | 40802191 | 40802192 | rs17171781 | + | T | C/T | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.035993 |
SUGCT | chr7 | 40802467 | 40802468 | rs140468682 | + | C | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.962351 |
SUGCT | chr7 | 40802736 | 40802737 | rs73125727 | + | T | G/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA, | 2 | 0.032637 |
SUGCT | chr7 | 40802859 | 40802860 | rs74338147 | + | A | A/G | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.883027 |
SUGCT | chr7 | 40802869 | 40802870 | rs12531154 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.965611 |
SUGCT | chr7 | 40803498 | 40803499 | rs76696531 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962141 |
SUGCT | chr7 | 40803535 | 40803536 | rs10486815 | + | T | C/T | single | intron | 6 | 1000GENOMES,AFFY,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.034908 |
SUGCT | chr7 | 40804062 | 40804063 | rs76236638 | + | A | A/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40804234 | 40804235 | rs79730736 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.068709 |
SUGCT | chr7 | 40804311 | 40804312 | rs77597943 | + | T | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.037424 |
SUGCT | chr7 | 40804394 | 40804395 | rs1203737 | + | C | C/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.375912 |
SUGCT | chr7 | 40804487 | 40804488 | rs4050962 | + | G | G/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.602740 |
SUGCT | chr7 | 40804588 | 40804589 | rs111363565 | + | A | A/G | single | intron | 4 | 1000GENOMES,BUSHMAN,ILLUMINA,TISHKOFF, | 2 | 0.985321 |
SUGCT | chr7 | 40805202 | 40805203 | rs4720373 | + | A | A/T | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.449407 |
SUGCT | chr7 | 40805314 | 40805315 | rs62449365 | + | C | C/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SSMP, | 2 | 0.729853 |
SUGCT | chr7 | 40805696 | 40805697 | rs12538533 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.463977 |
SUGCT | chr7 | 40805787 | 40805788 | rs137913499 | + | A | A/T | single | intron | 1 | 1000GENOMES, | 2 | 0.989899 |
SUGCT | chr7 | 40806018 | 40806019 | rs12539159 | + | G | C/G | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.036731 |
SUGCT | chr7 | 40806036 | 40806037 | rs148699381 | + | G | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017447 |
SUGCT | chr7 | 40806508 | 40806509 | rs17171782 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.964193 |
SUGCT | chr7 | 40806593 | 40806594 | rs80302463 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.029181 |
SUGCT | chr7 | 40807457 | 40807458 | rs13242768 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 3 | 0.614932 |
SUGCT | chr7 | 40807462 | 40807463 | rs12534713 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.963011 |
SUGCT | chr7 | 40807508 | 40807508 | rs34639624 | + | - | -/T | insertion | intron | 3 | 1000GENOMES,ABI,LUNTER, | 2 | 0.958219 |
SUGCT | chr7 | 40807539 | 40807540 | rs12534734 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.966511 |
SUGCT | chr7 | 40808517 | 40808518 | rs74642859 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA, | 2 | 0.044386 |
SUGCT | chr7 | 40809142 | 40809143 | rs2876978 | + | G | A/G | single | intron | 19 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.537721 |
SUGCT | chr7 | 40809286 | 40809287 | rs78100575 | + | A | A/G | single | intron | 3 | 1000GENOMES,BL,SSMP, | 2 | 0.963162 |
SUGCT | chr7 | 40809687 | 40809688 | rs77137181 | + | A | A/C | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962576 |
SUGCT | chr7 | 40810400 | 40810401 | rs6956585 | + | A | A/G | single | intron | 15 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.452511 |
SUGCT | chr7 | 40811234 | 40811235 | rs76020617 | + | G | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.037424 |
SUGCT | chr7 | 40812078 | 40812079 | rs12701832 | + | T | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.269424 |
SUGCT | chr7 | 40812158 | 40812159 | rs117512853 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.989991 |
SUGCT | chr7 | 40812487 | 40812488 | rs4720374 | + | T | G/T | single | intron | 7 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PJP,WI_SSAHASNP, | 2 | 0.038729 |
SUGCT | chr7 | 40812711 | 40812712 | rs80275678 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.072161 |
SUGCT | chr7 | 40815024 | 40815025 | rs17530165 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.664190 |
SUGCT | chr7 | 40815894 | 40815895 | rs17530213 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.329787 |
SUGCT | chr7 | 40815969 | 40815970 | rs116582634 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012631 |
SUGCT | chr7 | 40816392 | 40816393 | rs1921742 | + | C | C/G | single | intron | 3 | 1000GENOMES,SSMP,TSC-CSHL, | 2 | 0.984604 |
SUGCT | chr7 | 40816438 | 40816439 | rs4460274 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.333845 |
SUGCT | chr7 | 40816464 | 40816465 | rs2329877 | + | C | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.551538 |
SUGCT | chr7 | 40816515 | 40816516 | rs67368543 | + | T | -/T | deletion | intron | 4 | 1000GENOMES,DEVINE_LAB,LUNTER,SSMP, | 2 | 0.046373 |
SUGCT | chr7 | 40816579 | 40816580 | rs17530234 | + | T | G/T | single | intron | 9 | 1000GENOMES,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.080735 |
SUGCT | chr7 | 40816652 | 40816653 | rs17439448 | + | C | C/T | single | intron | 8 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.919825 |
SUGCT | chr7 | 40817061 | 40817062 | rs73125733 | + | T | A/T | single | intron | 7 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP, | 2 | 0.338060 |
SUGCT | chr7 | 40817571 | 40817572 | rs17439476 | + | C | C/T | single | intron | 3 | 1000GENOMES,PERLEGEN,SSMP, | 2 | 0.987786 |
SUGCT | chr7 | 40817836 | 40817836 | rs10667994 | + | - | -/TT | insertion | intron | 13 | 1000GENOMES,ABI,BGI,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.523352 |
SUGCT | chr7 | 40818201 | 40818202 | rs4720375 | + | G | C/G | single | intron | 8 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,PERLEGEN,SSMP,WI_SSAHASNP, | 2 | 0.035838 |
SUGCT | chr7 | 40818563 | 40818564 | rs79465884 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012195 |
SUGCT | chr7 | 40818698 | 40818699 | rs145497311 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989899 |
SUGCT | chr7 | 40818712 | 40818712 | rs78600658 | + | - | -/C | insertion | intron | 5 | 1000GENOMES,GMI,LUNTER,SSMP,TISHKOFF, | 2 | 0.745638 |
SUGCT | chr7 | 40818757 | 40818758 | rs73125734 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.988522 |
SUGCT | chr7 | 40819222 | 40819223 | rs17439553 | + | A | A/G | single | intron | 8 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.919825 |
SUGCT | chr7 | 40819310 | 40819311 | rs17439595 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.930029 |
SUGCT | chr7 | 40819900 | 40819901 | rs76773377 | + | G | A/G | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.067369 |
SUGCT | chr7 | 40820406 | 40820407 | rs55744420 | + | C | A/C | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.086921 |
SUGCT | chr7 | 40820640 | 40820641 | rs10499618 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.060897 |
SUGCT | chr7 | 40820782 | 40820783 | rs12155167 | + | G | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.066538 |
SUGCT | chr7 | 40820919 | 40820920 | rs12154576 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 2 | 0.929983 |
SUGCT | chr7 | 40821106 | 40821107 | rs34146903 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,SSMP, | 2 | 0.980752 |
SUGCT | chr7 | 40821224 | 40821225 | rs75181352 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.013761 |
SUGCT | chr7 | 40821857 | 40821858 | rs76243194 | + | T | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.073853 |
SUGCT | chr7 | 40821870 | 40821871 | rs78868512 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.074771 |
SUGCT | chr7 | 40822035 | 40822036 | rs17770820 | + | A | A/C | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.963793 |
SUGCT | chr7 | 40822120 | 40822121 | rs10231324 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.340197 |
SUGCT | chr7 | 40822283 | 40822286 | rs140108836 | + | ATC | -/ATC | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.020202 |
SUGCT | chr7 | 40822313 | 40822314 | rs13240894 | + | G | A/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.331839 |
SUGCT | chr7 | 40822486 | 40822487 | rs17714085 | + | G | G/T | single | intron | 3 | 1000GENOMES,GMI,PERLEGEN, | 2 | 0.987091 |
SUGCT | chr7 | 40822698 | 40822699 | rs78318304 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.016551 |
SUGCT | chr7 | 40822833 | 40822834 | rs4050963 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.339768 |
SUGCT | chr7 | 40823943 | 40823944 | rs17688144 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,PERLEGEN, | 2 | 0.019828 |
SUGCT | chr7 | 40824132 | 40824133 | rs1921743 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.759494 |
SUGCT | chr7 | 40824905 | 40824906 | rs17770843 | + | G | A/G | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.225709 |
SUGCT | chr7 | 40825555 | 40825556 | rs13225269 | + | A | A/C | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.902473 |
SUGCT | chr7 | 40825624 | 40825625 | rs79387281 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.011468 |
SUGCT | chr7 | 40825807 | 40825808 | rs7804009 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.338772 |
SUGCT | chr7 | 40825818 | 40825819 | rs78155765 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986510 |
SUGCT | chr7 | 40826040 | 40826041 | rs7807596 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.630874 |
SUGCT | chr7 | 40826270 | 40826271 | rs7808211 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.359677 |
SUGCT | chr7 | 40826273 | 40826274 | rs77426612 | + | A | A/C | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.972477 |
SUGCT | chr7 | 40826320 | 40826320 | rs11453803 | + | - | -/C | insertion | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP, | 2 | 0.632326 |
SUGCT | chr7 | 40826334 | 40826335 | rs113719362 | + | A | A/G | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.972477 |
SUGCT | chr7 | 40826387 | 40826388 | rs34213068 | + | A | A/T | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.897436 |
SUGCT | chr7 | 40826761 | 40826762 | rs1006376 | + | G | G/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.534884 |
SUGCT | chr7 | 40827057 | 40827075 | rs147097338 | + | AAGATCTCAGAGAAA | -/AAGATCTCAGAGA | deletion | intron | 3 | 1000GENOMES,GMI,LUNTER, | 2 | 0.456382 |
SUGCT | chr7 | 40827510 | 40827511 | rs35105954 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,BGI,GMI,SSMP, | 2 | 0.037859 |
SUGCT | chr7 | 40827650 | 40827651 | rs34994199 | + | C | A/C | single | intron | 7 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.084249 |
SUGCT | chr7 | 40827754 | 40827755 | rs1115714 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.360920 |
SUGCT | chr7 | 40827961 | 40827962 | rs1115715 | + | A | A/C | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.634979 |
SUGCT | chr7 | 40828525 | 40828526 | rs115712936 | + | T | G/T | single | intron | 3 | 1000GENOMES,ILLUMINA,SSMP, | 2 | 0.010889 |
SUGCT | chr7 | 40829119 | 40829120 | rs76787453 | + | T | G/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40829421 | 40829422 | rs723837 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BGI,GMI,PERLEGEN,SSMP,TSC-CSHL,WI_SSAHASNP, | 2 | 0.964193 |
SUGCT | chr7 | 40829443 | 40829444 | rs763714 | + | G | A/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.398266 |
SUGCT | chr7 | 40829485 | 40829486 | rs723838 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.430776 |
SUGCT | chr7 | 40829947 | 40829948 | rs7784052 | + | T | A/T | single | intron | 10 | 1000GENOMES,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.235832 |
SUGCT | chr7 | 40830112 | 40830113 | rs7801192 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.659666 |
SUGCT | chr7 | 40830304 | 40830305 | rs55641974 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.064156 |
SUGCT | chr7 | 40830422 | 40830423 | rs75667357 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.948718 |
SUGCT | chr7 | 40830631 | 40830632 | rs17714132 | + | G | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.033966 |
SUGCT | chr7 | 40830756 | 40830757 | rs7785245 | + | T | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,ILLUMINA,PERLEGEN,WI_SSAHASNP, | 2 | 0.044436 |
SUGCT | chr7 | 40830836 | 40830837 | rs12701835 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.341096 |
SUGCT | chr7 | 40831034 | 40831034 | rs202084171 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.663912 |
SUGCT | chr7 | 40831035 | 40831035 | rs35014593 | + | - | -/CATT | insertion | intron | 8 | 1000GENOMES,ABI,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.664070 |
SUGCT | chr7 | 40831134 | 40831135 | rs17439694 | + | G | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.013158 |
SUGCT | chr7 | 40831295 | 40831296 | rs10231545 | + | G | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.336000 |
SUGCT | chr7 | 40832143 | 40832144 | rs17688247 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.920010 |
SUGCT | chr7 | 40832365 | 40832366 | rs113528033 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40832581 | 40832582 | rs78155316 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.939669 |
SUGCT | chr7 | 40832596 | 40832597 | rs1203570 | + | A | A/C | single | intron | 23 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.332986 |
SUGCT | chr7 | 40833302 | 40833303 | rs114295515 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.984321 |
SUGCT | chr7 | 40833480 | 40833481 | rs55832912 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,HGSV,SSMP, | 2 | 0.939156 |
SUGCT | chr7 | 40833599 | 40833600 | rs35628600 | + | G | A/G | single | intron | 10 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP, | 2 | 0.398445 |
SUGCT | chr7 | 40833617 | 40833618 | rs34195626 | + | T | -/T | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,BUSHMAN,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,SSMP, | 2 | 0.437672 |
SUGCT | chr7 | 40834715 | 40834716 | rs17688285 | + | T | G/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.340197 |
SUGCT | chr7 | 40834824 | 40834824 | rs34859258 | + | - | -/A | insertion | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,DEVINE_LAB,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.657967 |
SUGCT | chr7 | 40835944 | 40835945 | rs1921746 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.424400 |
SUGCT | chr7 | 40836218 | 40836219 | rs1921747 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.661791 |
SUGCT | chr7 | 40836243 | 40836244 | rs1921748 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.669656 |
SUGCT | chr7 | 40836290 | 40836291 | rs1203569 | + | T | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.583353 |
SUGCT | chr7 | 40836520 | 40836521 | rs17620991 | + | G | C/G | single | intron | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.069260 |
SUGCT | chr7 | 40837141 | 40837142 | rs17621020 | + | G | C/G | single | intron | 4 | 1000GENOMES,GMI,PERLEGEN,SSMP, | 2 | 0.058759 |
SUGCT | chr7 | 40837313 | 40837314 | rs10226900 | + | A | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.666667 |
SUGCT | chr7 | 40837501 | 40837502 | rs78803386 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.023955 |
SUGCT | chr7 | 40837735 | 40837736 | rs10227384 | + | A | A/G | single | intron | 9 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,ILLUMINA,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.615949 |
SUGCT | chr7 | 40837736 | 40837737 | rs10272516 | + | T | C/T | single | intron | 8 | 1000GENOMES,BL,ENSEMBL,GMI,HGSV,PJP,SSMP,WUGSC_SSAHASNP, | 2 | 0.380037 |
SUGCT | chr7 | 40837965 | 40837966 | rs71536699 | + | G | A/G | single | intron | 4 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.021082 |
SUGCT | chr7 | 40838345 | 40838347 | rs35927386 | + | AT | -/AT | deletion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,GMI,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.394037 |
SUGCT | chr7 | 40838349 | 40838350 | rs71965598 | + | A | -/A/AT | in-del | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,DEVINE_LAB,GMI,PJP, | 2 | 0.338991 |
SUGCT | chr7 | 40838559 | 40838560 | rs17621030 | + | T | C/T | single | intron | 14 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 3 | 0.332849 |
SUGCT | chr7 | 40838613 | 40838614 | rs73689851 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.988532 |
SUGCT | chr7 | 40838956 | 40838957 | rs13237870 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.671674 |
SUGCT | chr7 | 40839308 | 40839309 | rs1203572 | - | T | A/C | single | intron | 9 | 1000GENOMES,AFFY,COMPLETE_GENOMICS,KRIBB_YJKIM,KWOK,PERLEGEN,SC_JCM,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.904141 |
SUGCT | chr7 | 40839646 | 40839647 | rs10243080 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.667019 |
SUGCT | chr7 | 40839928 | 40839929 | rs117406701 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986075 |
SUGCT | chr7 | 40840155 | 40840156 | rs10276001 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.664682 |
SUGCT | chr7 | 40840969 | 40840970 | rs17688414 | + | C | C/T | single | intron | 12 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.660952 |
SUGCT | chr7 | 40841038 | 40841039 | rs35712272 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.661180 |
SUGCT | chr7 | 40841133 | 40841134 | rs73312233 | + | G | G/T | single | intron | 2 | 1000GENOMES,COMPLETE_GENOMICS, | 2 | 0.988532 |
SUGCT | chr7 | 40841571 | 40841572 | rs1203573 | - | A | C/T | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.622940 |
SUGCT | chr7 | 40841618 | 40841619 | rs17714215 | + | C | C/G | single | intron | 5 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP, | 2 | 0.963362 |
SUGCT | chr7 | 40841727 | 40841728 | rs113038204 | + | T | C/T | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.010092 |
SUGCT | chr7 | 40841977 | 40841978 | rs10225209 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.665428 |
SUGCT | chr7 | 40842144 | 40842145 | rs10225445 | + | A | A/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.665821 |
SUGCT | chr7 | 40842291 | 40842292 | rs1203574 | + | C | C/G | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.015320 |
SUGCT | chr7 | 40842336 | 40842337 | rs1203575 | - | T | A/G | single | intron | 21 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.336731 |
SUGCT | chr7 | 40844274 | 40844275 | rs17621117 | + | G | C/G | single | intron | 5 | 1000GENOMES,GMI,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.058157 |
SUGCT | chr7 | 40844462 | 40844463 | rs1974547 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.391985 |
SUGCT | chr7 | 40845801 | 40845802 | rs10268219 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.606803 |
SUGCT | chr7 | 40846090 | 40846091 | rs12666544 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.334614 |
SUGCT | chr7 | 40846223 | 40846224 | rs117290020 | + | T | A/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.013490 |
SUGCT | chr7 | 40846481 | 40846482 | rs55764442 | + | A | A/G | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.939422 |
SUGCT | chr7 | 40846594 | 40846595 | rs10272186 | + | C | A/C | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.231731 |
SUGCT | chr7 | 40846862 | 40846863 | rs79585070 | + | A | A/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.937086 |
SUGCT | chr7 | 40847220 | 40847221 | rs17770991 | + | C | C/T | single | intron | 12 | 1000GENOMES,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.606032 |
SUGCT | chr7 | 40847267 | 40847268 | rs78818493 | + | C | C/T | single | intron | 5 | 1000GENOMES,BUSHMAN,GMI,SSMP,TISHKOFF, | 2 | 0.939450 |
SUGCT | chr7 | 40847482 | 40847483 | rs116907501 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.041667 |
SUGCT | chr7 | 40847638 | 40847639 | rs55834632 | + | A | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,SSMP,TISHKOFF, | 2 | 0.936672 |
SUGCT | chr7 | 40847647 | 40847648 | rs10276629 | + | G | A/G | single | intron | 10 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.334106 |
SUGCT | chr7 | 40847654 | 40847655 | rs76391180 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.961706 |
SUGCT | chr7 | 40847816 | 40847817 | rs145172435 | + | T | A/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.010101 |
SUGCT | chr7 | 40847831 | 40847832 | rs1203576 | + | A | A/T | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.227708 |
SUGCT | chr7 | 40847908 | 40847909 | rs2302025 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.392840 |
SUGCT | chr7 | 40847948 | 40847949 | rs2302026 | + | G | G/T | single | intron | 14 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.771368 |
SUGCT | chr7 | 40848205 | 40848206 | rs3815265 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.323921 |
SUGCT | chr7 | 40848402 | 40848403 | rs886831 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.332840 |
SUGCT | chr7 | 40848501 | 40848502 | rs78732158 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.937086 |
SUGCT | chr7 | 40848535 | 40848536 | rs111632611 | + | C | C/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40848551 | 40848552 | rs13225441 | + | A | A/G | single | intron | 7 | 1000GENOMES,ABI,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP, | 2 | 0.983945 |
SUGCT | chr7 | 40848558 | 40848559 | rs4720376 | + | G | A/G | single | intron | 9 | 1000GENOMES,AFFY,BGI,GMI,ILLUMINA,KRIBB_YJKIM,SC_SNP,SSMP,WI_SSAHASNP, | 2 | 0.039515 |
SUGCT | chr7 | 40849152 | 40849153 | rs1921745 | - | G | C/T | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.766934 |
SUGCT | chr7 | 40849939 | 40849940 | rs141786424 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.942608 |
SUGCT | chr7 | 40850195 | 40850196 | rs12540807 | + | T | G/T | single | intron | 5 | 1000GENOMES,ABI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.038294 |
SUGCT | chr7 | 40850789 | 40850790 | rs62449401 | + | C | C/T | single | intron | 10 | 1000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.661180 |
SUGCT | chr7 | 40851052 | 40851053 | rs2108375 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.368925 |
SUGCT | chr7 | 40851165 | 40851166 | rs2108376 | + | C | C/T | single | intron | 13 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.624829 |
SUGCT | chr7 | 40851241 | 40851242 | rs66651482 | + | G | G/T | single | intron | 5 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.915674 |
SUGCT | chr7 | 40851302 | 40851303 | rs76081195 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.936672 |
SUGCT | chr7 | 40851734 | 40851735 | rs67648979 | + | T | C/T | single | intron | 5 | 1000GENOMES,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.085701 |
SUGCT | chr7 | 40851921 | 40851922 | rs35146091 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.659516 |
SUGCT | chr7 | 40852632 | 40852633 | rs34689844 | + | G | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.375686 |
SUGCT | chr7 | 40853502 | 40853503 | rs35995194 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.563213 |
SUGCT | chr7 | 40853513 | 40853514 | rs75535261 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.018728 |
SUGCT | chr7 | 40853852 | 40853853 | rs78107670 | + | A | A/G | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.962810 |
SUGCT | chr7 | 40854094 | 40854095 | rs113845832 | + | A | A/G | single | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.989918 |
SUGCT | chr7 | 40854156 | 40854156 | rs199748013 | + | - | -/T | insertion | intron | 2 | 1000GENOMES,GMI, | 2 | 0.941690 |
SUGCT | chr7 | 40854303 | 40854304 | rs12701836 | + | C | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.606828 |
SUGCT | chr7 | 40854445 | 40854446 | rs55992488 | + | G | A/G | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA,SSMP, | 2 | 0.084034 |
SUGCT | chr7 | 40854634 | 40854635 | rs74758827 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.061258 |
SUGCT | chr7 | 40855328 | 40855329 | rs78487475 | + | G | G/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.937086 |
SUGCT | chr7 | 40855719 | 40855720 | rs12701837 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.610304 |
SUGCT | chr7 | 40855758 | 40855759 | rs75620270 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.937500 |
SUGCT | chr7 | 40856481 | 40856482 | rs35570092 | + | C | A/C | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSMP,TISHKOFF, | 2 | 0.329982 |
SUGCT | chr7 | 40856847 | 40856848 | rs10233069 | + | C | A/C | single | intron | 16 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.368498 |
SUGCT | chr7 | 40857120 | 40857121 | rs10252053 | + | T | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.324675 |
SUGCT | chr7 | 40857291 | 40857292 | rs17688549 | + | G | A/G | single | intron | 5 | 1000GENOMES,AFFY,GMI,PERLEGEN,SSMP, | 2 | 0.061679 |
SUGCT | chr7 | 40858003 | 40858004 | rs73125791 | + | C | C/G | single | intron | 7 | 1000GENOMES,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.771062 |
SUGCT | chr7 | 40858478 | 40858479 | rs62449405 | + | G | G/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.765811 |
SUGCT | chr7 | 40858577 | 40858578 | rs13243593 | + | C | A/C | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,GMI,PJP,SSAHASNP,SSMP, | 2 | 0.371442 |
SUGCT | chr7 | 40858841 | 40858842 | rs181339957 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.011019 |
SUGCT | chr7 | 40859728 | 40859729 | rs148512235 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.013315 |
SUGCT | chr7 | 40859879 | 40859880 | rs140376943 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,PJP,SSMP, | 2 | 0.108356 |
SUGCT | chr7 | 40860822 | 40860823 | rs77962412 | + | T | A/T | single | intron | 4 | 1000GENOMES,ENSEMBL,PJP,SSMP, | 2 | 0.016514 |
SUGCT | chr7 | 40860919 | 40860920 | rs142664696 | + | A | A/G | single | intron | 4 | 1000GENOMES,BL,GMI,SSMP, | 2 | 0.803949 |
SUGCT | chr7 | 40861083 | 40861084 | rs149346062 | + | A | A/T | single | intron | 4 | 1000GENOMES,GMI,PJP,SSMP, | 2 | 0.610193 |
SUGCT | chr7 | 40861180 | 40861181 | rs143041394 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.042241 |
SUGCT | chr7 | 40861277 | 40861278 | rs148192245 | + | C | C/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.953627 |
SUGCT | chr7 | 40861788 | 40861789 | rs140137796 | + | G | -/G | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.057392 |
SUGCT | chr7 | 40861828 | 40861829 | rs142530316 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.083563 |
SUGCT | chr7 | 40862050 | 40862051 | rs150558358 | + | G | A/G | single | intron | 4 | 1000GENOMES,GMI,MPI_MOLGEN,SSMP, | 2 | 0.062902 |
SUGCT | chr7 | 40862369 | 40862370 | rs10235458 | + | C | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.619390 |
SUGCT | chr7 | 40862444 | 40862445 | rs1203571 | + | A | A/G | single | intron | 8 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KWOK,PERLEGEN,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.929562 |
SUGCT | chr7 | 40862762 | 40862763 | rs17688571 | + | T | C/T | single | intron | 9 | 1000GENOMES,AFFY,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.072209 |
SUGCT | chr7 | 40862985 | 40862985 | rs201624198 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.983930 |
SUGCT | chr7 | 40863000 | 40863001 | rs77918995 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.946475 |
SUGCT | chr7 | 40863526 | 40863527 | rs73689856 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.988073 |
SUGCT | chr7 | 40864039 | 40864042 | rs145003095 | + | AGG | -/AGG | deletion | intron | 5 | 1000GENOMES,BILGI_BIOE,GMI,LUNTER,SSMP, | 2 | 0.060147 |
SUGCT | chr7 | 40865218 | 40865219 | rs13230202 | + | T | C/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.129296 |
SUGCT | chr7 | 40865302 | 40865303 | rs10951639 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.566064 |
SUGCT | chr7 | 40865509 | 40865510 | rs140208608 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
SUGCT | chr7 | 40865582 | 40865583 | rs1029620 | + | G | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.435418 |
SUGCT | chr7 | 40865599 | 40865600 | rs79354326 | + | G | G/T | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.939570 |
SUGCT | chr7 | 40865695 | 40865696 | rs17688583 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,AFFY,ENSEMBL,HGSV,HUMANGENOME_JCVI,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.871724 |
SUGCT | chr7 | 40865708 | 40865709 | rs1029621 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.701800 |
SUGCT | chr7 | 40866128 | 40866129 | rs145584896 | + | A | A/C | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.989899 |
SUGCT | chr7 | 40866234 | 40866235 | rs1012568 | - | T | A/T | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.857601 |
SUGCT | chr7 | 40866241 | 40866242 | rs1012567 | - | G | C/G | single | intron | 12 | 1000GENOMES,ABI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.864401 |
SUGCT | chr7 | 40866662 | 40866663 | rs17688601 | + | C | A/C | single | intron | 10 | 1000GENOMES,ABI,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.127451 |
SUGCT | chr7 | 40866845 | 40866846 | rs17688607 | + | G | A/C/G | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL,GMI,ILLUMINA,PERLEGEN, | 3 | 0.026258 |
SUGCT | chr7 | 40868140 | 40868141 | rs4723979 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.723138 |
SUGCT | chr7 | 40868430 | 40868431 | rs1013574 | + | C | C/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.722020 |
SUGCT | chr7 | 40868486 | 40868487 | rs79252614 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.058312 |
SUGCT | chr7 | 40868864 | 40868865 | rs1013575 | + | C | A/C | single | intron | 7 | 1000GENOMES,ABI,BGI,BUSHMAN,GMI,SC_JCM,TSC-CSHL, | 2 | 0.041538 |
SUGCT | chr7 | 40869155 | 40869156 | rs1013576 | + | A | A/T | single | intron | 6 | 1000GENOMES,ABI,BGI,GMI,SSMP,TSC-CSHL, | 2 | 0.962348 |
SUGCT | chr7 | 40869468 | 40869469 | rs80171869 | + | G | C/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.011314 |
SUGCT | chr7 | 40869490 | 40869491 | rs1203579 | + | G | A/G | single | intron | 5 | 1000GENOMES,KWOK,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.064950 |
SUGCT | chr7 | 40869753 | 40869754 | rs6462989 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.631113 |
SUGCT | chr7 | 40869917 | 40869918 | rs76731615 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.035248 |
SUGCT | chr7 | 40869965 | 40869966 | rs34565813 | + | C | C/T | single | intron | 11 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF, | 2 | 0.723870 |
SUGCT | chr7 | 40870197 | 40870198 | rs79182998 | + | C | C/T | single | intron | 3 | 1000GENOMES,BGI,GMI, | 2 | 0.962576 |
SUGCT | chr7 | 40870616 | 40870617 | rs10247138 | + | C | C/T | single | intron | 5 | 1000GENOMES,HGSV,PJP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.935434 |
SUGCT | chr7 | 40870770 | 40870771 | rs10247275 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.758306 |
SUGCT | chr7 | 40870934 | 40870935 | rs10279715 | + | A | A/G | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.570412 |
SUGCT | chr7 | 40871155 | 40871156 | rs12537964 | + | T | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.297345 |
SUGCT | chr7 | 40871385 | 40871386 | rs73689859 | + | A | A/G | single | intron | 4 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,TISHKOFF, | 2 | 0.987615 |
SUGCT | chr7 | 40871684 | 40871685 | rs17714394 | + | A | A/T | single | intron | 5 | 1000GENOMES,GMI,ILLUMINA,PERLEGEN,SSMP, | 2 | 0.940146 |
SUGCT | chr7 | 40871857 | 40871858 | rs13246232 | + | A | A/G | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.628854 |
SUGCT | chr7 | 40872173 | 40872174 | rs35107273 | + | C | C/T | single | intron | 8 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA, | 2 | 0.667430 |
SUGCT | chr7 | 40872173 | 40872174 | rs201151778 | + | C | -/C | deletion | intron | 1 | 1000GENOMES, | 2 | 0.332874 |
SUGCT | chr7 | 40872278 | 40872279 | rs76388533 | + | T | C/T | single | intron | 3 | 1000GENOMES,GMI,ILLUMINA-UK, | 2 | 0.068807 |
SUGCT | chr7 | 40872278 | 40872278 | rs199669253 | + | - | -/C | insertion | intron | 1 | 1000GENOMES, | 2 | 0.931589 |
SUGCT | chr7 | 40872427 | 40872428 | rs6949092 | + | T | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.287215 |
SUGCT | chr7 | 40873220 | 40873221 | rs1733483 | - | A | C/T | single | intron | 22 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.627907 |
SUGCT | chr7 | 40873386 | 40873388 | rs35074235 | + | AG | -/AG | deletion | intron | 11 | 1000GENOMES,ABI,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF, | 2 | 0.227314 |
SUGCT | chr7 | 40873915 | 40873916 | rs9639838 | + | C | C/T | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.638564 |
SUGCT | chr7 | 40874130 | 40874131 | rs76254322 | + | G | G/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.979983 |
SUGCT | chr7 | 40874144 | 40874145 | rs7809237 | + | A | A/C | single | intron | 14 | 1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.536775 |
SUGCT | chr7 | 40874375 | 40874376 | rs7809981 | + | G | G/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.603946 |
SUGCT | chr7 | 40875191 | 40875192 | rs17621345 | + | A | A/C | single | intron | 11 | 1000GENOMES,AFFY,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF, | 2 | 0.855509 |
SUGCT | chr7 | 40875457 | 40875458 | rs17714442 | + | A | A/T | single | intron | 10 | 1000GENOMES,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PERLEGEN,PJP,SSMP,TISHKOFF, | 2 | 0.685727 |
SUGCT | chr7 | 40875646 | 40875647 | rs74742717 | + | A | A/C | single | intron | 2 | 1000GENOMES,BL, | 2 | 0.976501 |
SUGCT | chr7 | 40876059 | 40876060 | rs12538907 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.599387 |
SUGCT | chr7 | 40876079 | 40876080 | rs12538949 | + | G | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,SSMP,TISHKOFF, | 2 | 0.399153 |
SUGCT | chr7 | 40876113 | 40876114 | rs12538933 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.588830 |
SUGCT | chr7 | 40876136 | 40876137 | rs12538963 | + | G | A/G | single | intron | 7 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,SSMP, | 2 | 0.042126 |
SUGCT | chr7 | 40876154 | 40876155 | rs12538965 | + | G | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.401533 |
SUGCT | chr7 | 40876785 | 40876786 | rs1921757 | - | A | C/T | single | intron | 15 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.391669 |
SUGCT | chr7 | 40877283 | 40877284 | rs117462113 | + | G | A/G | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.026545 |
SUGCT | chr7 | 40877396 | 40877397 | rs10246441 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_SNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.603109 |
SUGCT | chr7 | 40877472 | 40877473 | rs12701838 | + | A | A/G | single | intron | 9 | 1000GENOMES,ABI,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.843263 |
SUGCT | chr7 | 40877715 | 40877716 | rs12019351 | + | A | A/C | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,SC_SNP,SSMP,TISHKOFF, | 2 | 0.596235 |
SUGCT | chr7 | 40877718 | 40877719 | rs73689862 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.012385 |
SUGCT | chr7 | 40878017 | 40878018 | rs73689863 | + | G | G/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.927523 |
SUGCT | chr7 | 40878205 | 40878206 | rs78490985 | + | C | C/T | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.959095 |
SUGCT | chr7 | 40878714 | 40878715 | rs76844348 | + | C | C/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.925688 |
SUGCT | chr7 | 40878814 | 40878815 | rs55996031 | + | T | G/T | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA-UK,PJP,TISHKOFF, | 2 | 0.012385 |
SUGCT | chr7 | 40878895 | 40878896 | rs2108377 | + | T | C/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,SC_JCM,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.465478 |
SUGCT | chr7 | 40879567 | 40879567 | rs139342457 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.982094 |
SUGCT | chr7 | 40880199 | 40880200 | rs7777500 | + | G | A/G | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,WI_SSAHASNP, | 2 | 0.320769 |
SUGCT | chr7 | 40880498 | 40880498 | rs74810691 | + | - | -/T | insertion | intron | 4 | 1000GENOMES,GMI,LUNTER,SSMP, | 2 | 0.695592 |
SUGCT | chr7 | 40880590 | 40880591 | rs1921756 | - | T | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,SSMP,TSC-CSHL, | 4 | 0.519970 |
SUGCT | chr7 | 40880734 | 40880735 | rs17688697 | + | G | G/T | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SSMP, | 2 | 0.524680 |
SUGCT | chr7 | 40881613 | 40881614 | rs1921755 | - | T | A/C | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TSC-CSHL, | 2 | 0.526803 |
SUGCT | chr7 | 40881937 | 40881938 | rs67369140 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP, | 2 | 0.386061 |
SUGCT | chr7 | 40882642 | 40882643 | rs732890 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.357694 |
SUGCT | chr7 | 40882772 | 40882773 | rs758010 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.631675 |
SUGCT | chr7 | 40882839 | 40882840 | rs4723981 | + | G | A/G | single | intron | 10 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.060329 |
SUGCT | chr7 | 40882875 | 40882876 | rs2005766 | + | C | C/T | single | intron | 11 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.630306 |
SUGCT | chr7 | 40883101 | 40883103 | rs10533463 | + | TG | -/TG | deletion | intron | 4 | 1000GENOMES,BL,DEVINE_LAB,LUNTER, | 2 | 0.356290 |
SUGCT | chr7 | 40883235 | 40883236 | rs4425648 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.365253 |
SUGCT | chr7 | 40883282 | 40883283 | rs4265100 | + | G | C/G | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.363885 |
SUGCT | chr7 | 40883309 | 40883310 | rs4720378 | + | G | C/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.364797 |
SUGCT | chr7 | 40883433 | 40883434 | rs4723982 | + | G | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.365709 |
SUGCT | chr7 | 40883551 | 40883552 | rs4720379 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.364840 |
SUGCT | chr7 | 40884241 | 40884242 | rs1921754 | - | C | A/G | single | intron | 16 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364920 |
SUGCT | chr7 | 40884419 | 40884420 | rs1921753 | - | C | A/G | single | intron | 13 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364507 |
SUGCT | chr7 | 40884533 | 40884534 | rs4720380 | + | A | A/G | single | intron | 11 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.635160 |
SUGCT | chr7 | 40884618 | 40884619 | rs73689864 | + | A | A/T | single | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.988991 |
SUGCT | chr7 | 40884656 | 40884657 | rs55748232 | + | A | A/T | single | intron | 6 | 1000GENOMES,BGI,GMI,HGSV,ILLUMINA-UK,TISHKOFF, | 2 | 0.538991 |
SUGCT | chr7 | 40885093 | 40885094 | rs74471237 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.021109 |
SUGCT | chr7 | 40885227 | 40885228 | rs4720381 | + | G | G/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.638686 |
SUGCT | chr7 | 40885357 | 40885358 | rs73689865 | + | T | A/T | single | intron | 4 | 1000GENOMES,GMI,ILLUMINA-UK,SSMP, | 2 | 0.073394 |
SUGCT | chr7 | 40885512 | 40885513 | rs6952818 | + | T | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.367701 |
SUGCT | chr7 | 40885524 | 40885525 | rs4720382 | + | A | A/G | single | intron | 5 | 1000GENOMES,BGI,GMI,SSMP,WI_SSAHASNP, | 2 | 0.959530 |
SUGCT | chr7 | 40885657 | 40885658 | rs6952995 | + | T | C/T | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.365174 |
SUGCT | chr7 | 40885662 | 40885663 | rs6970936 | + | G | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.386654 |
SUGCT | chr7 | 40885830 | 40885831 | rs12531482 | + | G | A/G | single | intron | 6 | 1000GENOMES,BGI,CSHL-HAPMAP,GMI,SSAHASNP,SSMP, | 2 | 0.040470 |
SUGCT | chr7 | 40885933 | 40885934 | rs2876979 | + | G | A/G | single | intron | 16 | 1000GENOMES,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.357897 |
SUGCT | chr7 | 40886575 | 40886576 | rs7808121 | + | C | C/T | single | intron | 14 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.640816 |
SUGCT | chr7 | 40886679 | 40886680 | rs77686906 | + | A | A/C | single | intron | 4 | 1000GENOMES,BGI,GMI,SSMP, | 2 | 0.959530 |
SUGCT | chr7 | 40886715 | 40886716 | rs7808678 | + | G | A/G | single | intron | 12 | 1000GENOMES,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.364840 |
SUGCT | chr7 | 40886757 | 40886758 | rs7808304 | + | A | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.635036 |
SUGCT | chr7 | 40886853 | 40886853 | rs10676694 | + | - | -/ACTC | insertion | intron | 5 | 1000GENOMES,BL,BUSHMAN,DEVINE_LAB,LUNTER, | 2 | 0.542661 |
SUGCT | chr7 | 40886854 | 40886854 | rs35114282 | + | - | -/ACTC/CT | insertion | intron | 3 | 1000GENOMES,DEVINE_LAB,SSMP, | 2 | 0.560606 |
SUGCT | chr7 | 40886998 | 40887002 | rs201875749 | + | TTTC | -/TTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.340680 |
SUGCT | chr7 | 40887007 | 40887008 | rs148228342 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.016070 |
SUGCT | chr7 | 40887410 | 40887411 | rs28621645 | + | A | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.635036 |
SUGCT | chr7 | 40887694 | 40887695 | rs12532916 | + | G | A/G | single | intron | 6 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSMP, | 2 | 0.039486 |
SUGCT | chr7 | 40887705 | 40887706 | rs10237052 | + | C | C/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.634747 |
SUGCT | chr7 | 40887744 | 40887745 | rs10266350 | + | A | A/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.692132 |
SUGCT | chr7 | 40887862 | 40887869 | rs112291991 | + | ACCTGGC | -/ACCTGGC | deletion | intron | 5 | 1000GENOMES,BUSHMAN,GMI,LUNTER,PJP, | 2 | 0.361009 |
SUGCT | chr7 | 40888048 | 40888049 | rs4050966 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 2 | 0.460520 |
SUGCT | chr7 | 40888597 | 40888598 | rs3801239 | + | G | A/G | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.322171 |
SUGCT | chr7 | 40888933 | 40888934 | rs73689870 | + | T | C/T | single | intron | 7 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.095784 |
SUGCT | chr7 | 40889039 | 40889040 | rs6963162 | + | G | A/G | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.365253 |
SUGCT | chr7 | 40889555 | 40889556 | rs55836921 | + | C | C/T | single | intron | 5 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,SSMP, | 2 | 0.926147 |
SUGCT | chr7 | 40889984 | 40889985 | rs10226883 | + | G | A/G | single | intron | 13 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.461855 |
SUGCT | chr7 | 40890669 | 40890670 | rs10227436 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.536252 |
SUGCT | chr7 | 40891125 | 40891126 | rs4085300 | - | G | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,PERLEGEN,SC_JCM,SSMP,TISHKOFF,TSC-CSHL,WUGSC_SSAHASNP, | 3 | 0.653313 |
SUGCT | chr7 | 40891259 | 40891260 | rs7806152 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,ILLUMINA,KRIBB_YJKIM,TISHKOFF,WI_SSAHASNP, | 2 | 0.987901 |
SUGCT | chr7 | 40891683 | 40891684 | rs10231596 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.636502 |
SUGCT | chr7 | 40891811 | 40891812 | rs6957123 | + | T | G/T | single | intron | 16 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,KRIBB_YJKIM,PJP,SSMP,TISHKOFF, | 2 | 0.363359 |
SUGCT | chr7 | 40892227 | 40892228 | rs17714523 | + | G | G/T | single | intron | 6 | 1000GENOMES,BGI,BUSHMAN,GMI,ILLUMINA,PERLEGEN, | 2 | 0.951131 |
SUGCT | chr7 | 40892323 | 40892324 | rs17171784 | + | G | G/T | single | intron | 4 | 1000GENOMES,BUSHMAN,PERLEGEN,TISHKOFF, | 2 | 0.978036 |
SUGCT | chr7 | 40892727 | 40892728 | rs4723983 | + | A | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.533042 |
SUGCT | chr7 | 40892999 | 40893000 | rs4720383 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.039450 |
SUGCT | chr7 | 40893274 | 40893275 | rs112783894 | + | C | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.977982 |
SUGCT | chr7 | 40893529 | 40893530 | rs56190843 | + | T | -/T | deletion | intron | 5 | 1000GENOMES,GMI,HGSV,LUNTER,SSMP, | 2 | 0.051883 |
SUGCT | chr7 | 40893994 | 40893998 | rs145101175 | + | TTTC | -/TTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.113866 |
SUGCT | chr7 | 40894009 | 40894018 | rs200574362 | + | CTTTCTTTC | -/CTTTCTTTC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.468779 |
SUGCT | chr7 | 40894013 | 40894018 | rs200124150 | + | CTTTC | -/CTTTC | deletion | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.480257 |
SUGCT | chr7 | 40894017 | 40894018 | rs72153686 | + | C | -/C | deletion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,LUNTER,PJP, | 2 | 0.501835 |
SUGCT | chr7 | 40894082 | 40894083 | rs62449429 | + | C | C/T | single | intron | 3 | 1000GENOMES,BCMHGSC_JDW,ENSEMBL, | 2 | 0.960092 |
SUGCT | chr7 | 40894083 | 40894087 | rs150153135 | + | TCTT | -/TCTT | deletion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.038108 |
SUGCT | chr7 | 40894100 | 40894104 | rs199847011 | + | CTTG | -/CTTG | deletion | intron | 1 | 1000GENOMES, | 2 | 0.031221 |
SUGCT | chr7 | 40894467 | 40894468 | rs6952729 | + | G | C/G | single | intron | 12 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,SC_SNP,SSMP,TISHKOFF, | 2 | 0.311070 |
SUGCT | chr7 | 40894701 | 40894702 | rs1921751 | - | C | A/G | single | intron | 8 | 1000GENOMES,ABI,BGI,GMI,PERLEGEN,SC_JCM,SSMP,TSC-CSHL, | 2 | 0.037757 |
SUGCT | chr7 | 40895185 | 40895186 | rs17621508 | + | T | A/T | single | intron | 6 | 1000GENOMES,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP, | 2 | 0.075073 |
SUGCT | chr7 | 40896713 | 40896714 | rs10268023 | + | T | A/T | single | intron | 11 | 1000GENOMES,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.310997 |
SUGCT | chr7 | 40897003 | 40897004 | rs1203577 | + | T | C/T | single | intron | 8 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,KWOK,SC_JCM,TISHKOFF, | 2 | 0.085264 |
SUGCT | chr7 | 40897266 | 40897267 | rs10255986 | + | C | C/T | single | intron | 15 | 1000GENOMES,AFFY,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.682119 |
SUGCT | chr7 | 40897975 | 40897976 | rs28583134 | + | T | C/T | single | intron | 9 | 1000GENOMES,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.311070 |
SUGCT | chr7 | 40898069 | 40898070 | rs17171785 | + | C | C/T | single | intron | 7 | 1000GENOMES,AFFY,BUSHMAN,ILLUMINA,KRIBB_YJKIM,PERLEGEN,TISHKOFF, | 2 | 0.971154 |
SUGCT | chr7 | 40898137 | 40898138 | rs1203578 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.548742 |
SUGCT | chr7 | 40898681 | 40898681 | rs201150719 | + | - | -/A | insertion | intron | 2 | 1000GENOMES,LUNTER, | 2 | 0.981635 |
SUGCT | chr7 | 40899142 | 40899143 | rs73312299 | + | G | C/G | single | intron | 4 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.015110 |
SUGCT | chr7 | 40899645 | 40899646 | rs6971120 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.448091 |
SUGCT | chr7 | 40899651 | 40899652 | rs73689875 | + | C | C/T | single | intron | 6 | 1000GENOMES,BUSHMAN,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.904675 |
SLC25A32 | chr8 | 104412829 | 104412830 | rs10103739 | + | C | C/T | single | intron | 10 | 1000GENOMES,ABI,BUSHMAN,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.943707 |
SLC25A32 | chr8 | 104412830 | 104412831 | rs74387812 | + | G | A/G | single | intron | 2 | 1000GENOMES,GMI, | 2 | 0.010101 |
SLC25A32 | chr8 | 104412934 | 104412935 | rs2241778 | + | C | C/T | single | intron | 22 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.551762 |
SLC25A32 | chr8 | 104412983 | 104412984 | rs76049463 | + | G | C/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.017842 |
SLC25A32 | chr8 | 104413379 | 104413380 | rs3098260 | + | A | A/C | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.787691 |
SLC25A32 | chr8 | 104413500 | 104413501 | rs117366417 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.966928 |
SLC25A32 | chr8 | 104413535 | 104413535 | rs34813768 | + | - | -/C | insertion | intron | 9 | 1000GENOMES,ABI,BILGI_BIOE,BL,BUSHMAN,GMI,HUMANGENOME_JCVI,LUNTER,TISHKOFF, | 2 | 0.735105 |
SLC25A32 | chr8 | 104413733 | 104413734 | rs115968673 | + | G | G/T | single | intron | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,TISHKOFF, | 2 | 0.976508 |
SLC25A32 | chr8 | 104414337 | 104414338 | rs117399628 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.032202 |
SLC25A32 | chr8 | 104414437 | 104414438 | rs2118058 | + | G | A/G | single | intron | 4 | 1000GENOMES,ABI,SC_JCM,TSC-CSHL, | 2 | 0.012631 |
SLC25A32 | chr8 | 104414592 | 104414593 | rs72675449 | + | A | A/G | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,GMI,TISHKOFF, | 2 | 0.933486 |
SLC25A32 | chr8 | 104414660 | 104414661 | rs114488433 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.013066 |
SLC25A32 | chr8 | 104414674 | 104414675 | rs3133809 | + | A | A/G | single | intron | 16 | 1000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,WI_SSAHASNP, | 2 | 0.550228 |
SLC25A32 | chr8 | 104414781 | 104414782 | rs6995834 | + | G | A/G | single | intron | 3 | 1000GENOMES,BCM_SSAHASNP,TISHKOFF, | 2 | 0.017857 |
SLC25A32 | chr8 | 104415117 | 104415118 | rs3133810 | + | C | C/T | single | intron | 11 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM,SSMP, | 2 | 0.904344 |
SLC25A32 | chr8 | 104415694 | 104415695 | rs117846978 | + | T | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.012620 |
SLC25A32 | chr8 | 104416020 | 104416021 | rs147119462 | + | T | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.016529 |
SLC25A32 | chr8 | 104416251 | 104416252 | rs17228841 | + | T | C/T | single | intron | 2 | 1000GENOMES,PERLEGEN, | 2 | 0.034140 |
SLC25A32 | chr8 | 104416529 | 104416530 | rs117499883 | + | A | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983464 |
SLC25A32 | chr8 | 104416692 | 104416693 | rs1865853 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.734396 |
SLC25A32 | chr8 | 104416784 | 104416785 | rs1865854 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.733607 |
SLC25A32 | chr8 | 104416800 | 104416801 | rs71520812 | + | C | C/T | single | intron | 6 | 1000GENOMES,BL,ENSEMBL,HUMANGENOME_JCVI,SSMP,TISHKOFF, | 2 | 0.943171 |
SLC25A32 | chr8 | 104416832 | 104416833 | rs1865855 | + | A | A/C | single | intron | 15 | 1000GENOMES,ABI,BCM-HGSC-SUB,BL,BUSHMAN,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,TISHKOFF,TSC-CSHL, | 2 | 0.690141 |
SLC25A32 | chr8 | 104417044 | 104417045 | rs17803441 | + | C | C/T | single | intron,ncRNA,missense | 9 | 1000GENOMES,AFFY,APPLERA_GI,CLINSEQ_SNP,EXOME_CHIP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN, | 2 | 0.952397 |
SLC25A32 | chr8 | 104417349 | 104417350 | rs3133811 | + | A | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.733607 |
SLC25A32 | chr8 | 104417890 | 104417890 | rs201957062 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
SLC25A32 | chr8 | 104418192 | 104418193 | rs117357669 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.033507 |
SLC25A32 | chr8 | 104418294 | 104418295 | rs13272915 | + | A | A/G | single | intron | 10 | 1000GENOMES,BCM-HGSC-SUB,BGI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP, | 2 | 0.668801 |
SLC25A32 | chr8 | 104418309 | 104418310 | rs4734708 | + | C | C/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SSAHASNP,WI_SSAHASNP, | 2 | 0.094977 |
SLC25A32 | chr8 | 104418566 | 104418567 | rs7016654 | + | A | A/C | single | intron | 5 | 1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,ILLUMINA-UK,TISHKOFF, | 2 | 0.954629 |
SLC25A32 | chr8 | 104419143 | 104419144 | rs142337299 | + | A | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.988522 |
SLC25A32 | chr8 | 104419441 | 104419442 | rs3133813 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.261276 |
SLC25A32 | chr8 | 104420099 | 104420100 | rs3134254 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.232726 |
SLC25A32 | chr8 | 104420108 | 104420109 | rs138160805 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.032599 |
SLC25A32 | chr8 | 104420160 | 104420160 | rs200282193 | + | - | -/TA | insertion | intron | 1 | 1000GENOMES, | 2 | 0.988981 |
SLC25A32 | chr8 | 104420199 | 104420200 | rs3134255 | + | T | A/T | single | intron | 10 | 1000GENOMES,ABI,BCM_SSAHASNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM, | 2 | 0.260512 |
SLC25A32 | chr8 | 104420291 | 104420292 | rs3098245 | - | G | C/T | single | intron | 9 | 1000GENOMES,ABI,BCM-HGSC-SUB,ENSEMBL,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP, | 2 | 0.788919 |
SLC25A32 | chr8 | 104420746 | 104420747 | rs3134262 | + | C | C/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.764041 |
SLC25A32 | chr8 | 104420981 | 104420982 | rs3134266 | + | T | A/T | single | intron | 18 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.449078 |
SLC25A32 | chr8 | 104421327 | 104421328 | rs3098244 | - | G | C/T | single | intron | 16 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.764751 |
SLC25A32 | chr8 | 104421447 | 104421462 | rs138664135 | + | ATACCATTCTACATT | -/ATACCATTCTACA | deletion | intron | 3 | 1000GENOMES,BILGI_BIOE,LUNTER, | 2 | 0.168962 |
SLC25A32 | chr8 | 104421719 | 104421720 | rs3133814 | + | A | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.732109 |
SLC25A32 | chr8 | 104421901 | 104421902 | rs3134269 | + | C | C/T | single | intron | 6 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SC_JCM, | 2 | 0.967638 |
SLC25A32 | chr8 | 104422570 | 104422571 | rs3098243 | - | A | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.449408 |
SLC25A32 | chr8 | 104422571 | 104422572 | rs60977629 | + | C | C/T | single | intron | 2 | 1000GENOMES,HGSV, | 2 | 0.989547 |
SLC25A32 | chr8 | 104422814 | 104422815 | rs3134279 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,SC_JCM,SSMP,TISHKOFF, | 2 | 0.223190 |
SLC25A32 | chr8 | 104422853 | 104422854 | rs3133815 | + | A | A/G | single | intron | 12 | 1000GENOMES,ABI,BGI,BL,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.735133 |
SLC25A32 | chr8 | 104423010 | 104423011 | rs118081385 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.013490 |
SLC25A32 | chr8 | 104423172 | 104423173 | rs117849763 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.033507 |
SLC25A32 | chr8 | 104423173 | 104423174 | rs3134284 | + | T | C/T | single | intron | 2 | 1000GENOMES,SC_JCM, | 2 | 0.033507 |
SLC25A32 | chr8 | 104423293 | 104423294 | rs3134285 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.499426 |
SLC25A32 | chr8 | 104423310 | 104423311 | rs3134286 | + | T | A/T | single | intron | 15 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.233414 |
SLC25A32 | chr8 | 104423485 | 104423486 | rs3134287 | + | T | C/T | single | intron | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.509490 |
SLC25A32 | chr8 | 104423979 | 104423980 | rs3134289 | + | T | A/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.494600 |
SLC25A32 | chr8 | 104424021 | 104424022 | rs73287934 | + | G | A/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA-UK, | 2 | 0.022915 |
SLC25A32 | chr8 | 104424189 | 104424190 | rs3134290 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.550919 |
SLC25A32 | chr8 | 104424336 | 104424337 | rs3133816 | + | C | C/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.737226 |
SLC25A32 | chr8 | 104424390 | 104424391 | rs3098242 | - | G | C/T | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.549943 |
SLC25A32 | chr8 | 104425303 | 104425304 | rs3098241 | - | A | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.216899 |
SLC25A32 | chr8 | 104425608 | 104425609 | rs3134291 | + | C | C/T | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.547898 |
SLC25A32 | chr8 | 104425879 | 104425880 | rs115361595 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987369 |
SLC25A32 | chr8 | 104426044 | 104426045 | rs3134292 | + | C | A/C | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.258745 |
SLC25A32 | chr8 | 104426083 | 104426084 | rs3134293 | + | C | C/T | single | intron,near-gene-5 | 13 | 1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SSMP, | 2 | 0.793236 |
SLC25A32 | chr8 | 104426244 | 104426245 | rs3133817 | + | A | A/G | single | intron,near-gene-5 | 18 | 1000GENOMES,ABI,AFFY,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SSMP,TISHKOFF,YUSUKE, | 2 | 0.736441 |
SLC25A32 | chr8 | 104426530 | 104426531 | rs28630640 | + | C | C/T | single | intron,near-gene-5 | 10 | 1000GENOMES,ABI,BL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,PJP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.943681 |
SLC25A32 | chr8 | 104426791 | 104426792 | rs73699799 | + | C | C/T | single | intron,near-gene-5 | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.987615 |
SLC25A32 | chr8 | 104426797 | 104426798 | rs3134294 | + | A | A/C | single | intron,near-gene-5 | 2 | 1000GENOMES,SC_JCM, | 2 | 0.966057 |
SLC25A32 | chr8 | 104426909 | 104426910 | rs5893654 | + | T | -/T | deletion | intron,near-gene-5 | 3 | 1000GENOMES,ABI,DEVINE_LAB, | 2 | 0.443119 |
SLC52A2 | chr8 | 145582293 | 145582294 | rs115940535 | + | C | A/C | single | intron,near-gene-5,ncRNA,untranslated-5 | 1 | 1000GENOMES, | 2 | 0.030923 |
SLC52A2 | chr8 | 145582739 | 145582740 | rs114304511 | + | A | A/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
SLC52A2 | chr8 | 145582808 | 145582809 | rs115365198 | + | C | C/G | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.985927 |
SLC52A2 | chr8 | 145582838 | 145582839 | rs3817681 | + | T | C/T | single | intron,near-gene-5 | 15 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.417187 |
SLC52A2 | chr8 | 145584438 | 145584439 | rs72695500 | + | C | C/T | single | intron | 5 | 1000GENOMES,BCM-HGSC-SUB,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.988068 |
SLC52A2 | chr8 | 145577823 | 145577824 | rs880701 | + | C | C/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SSMP,TSC-CSHL,YUSUKE, | 2 | 0.509607 |
SLC52A2 | chr8 | 145577828 | 145577829 | rs880702 | + | A | A/C | single | intron | 13 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,SC_JCM,SSMP,TSC-CSHL,YUSUKE, | 2 | 0.510064 |
SLC52A2 | chr8 | 145577898 | 145577899 | rs116055973 | + | C | C/T | single | intron,ncRNA,missense | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.982578 |
SLC52A2 | chr8 | 145577998 | 145577999 | rs2272664 | - | T | A/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,PJP,SSMP,YUSUKE, | 2 | 0.507378 |
SLC52A2 | chr8 | 145579930 | 145579931 | rs200026961 | + | C | C/G | single | intron,near-gene-5 | 2 | BILGI_BIOE,CLINSEQ_SNP, | 2 | 0.820500 |
SLC52A2 | chr8 | 145579931 | 145579932 | rs200985955 | + | C | C/T | single | intron,near-gene-5 | 2 | BILGI_BIOE,CLINSEQ_SNP, | 2 | 0.834500 |
SLC52A2 | chr8 | 145579935 | 145579936 | rs112211890 | + | C | C/T | single | intron,near-gene-5 | 3 | CLINSEQ_SNP,COMPLETE_GENOMICS,TISHKOFF, | 2 | 0.773085 |
SLC52A2 | chr8 | 145579952 | 145579953 | rs4993862 | - | T | A/G/T | single | intron,near-gene-5 | 2 | CLINSEQ_SNP,DEVINE_LAB, | 3 | 0.617117 |
SLC52A2 | chr8 | 145580983 | 145580984 | rs2272666 | + | A | A/G | single | intron,near-gene-5 | 21 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.387120 |
SLC52A2 | chr8 | 145581004 | 145581005 | rs115001185 | + | G | G/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.981707 |
SLC52A2 | chr8 | 145581023 | 145581024 | rs116687799 | + | C | C/T | single | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.981707 |
SLC52A2 | chr8 | 145581556 | 145581557 | rs2280840 | + | G | A/G | single | intron,near-gene-5 | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.480154 |
RFK | chr9 | 79002633 | 79002637 | rs138282433 | + | GGCC | -/GGCC | deletion | intron | 4 | 1000GENOMES,LUNTER,SSMP,WARNICH_LAB, | 2 | 0.078053 |
RFK | chr9 | 79002774 | 79002775 | rs2490579 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.578396 |
RFK | chr9 | 79002854 | 79002855 | rs35207397 | + | C | C/T | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP, | 2 | 0.981685 |
RFK | chr9 | 79002885 | 79002886 | rs13296425 | + | T | C/T | single | intron | 7 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,HUMANGENOME_JCVI,PJP,SSAHASNP, | 2 | 0.032937 |
RFK | chr9 | 79003323 | 79003324 | rs2501926 | - | G | C/T | single | intron | 22 | 1000GENOMES,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.084778 |
RFK | chr9 | 79003412 | 79003413 | rs2501925 | - | G | A/C | single | intron | 20 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_JCM,SC_SNP,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.512960 |
RFK | chr9 | 79003439 | 79003440 | rs2501924 | - | G | C/T | single | intron | 23 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.065364 |
RFK | chr9 | 79003780 | 79003781 | rs2490580 | + | A | A/G | single | intron | 23 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,WUGSC_SSAHASNP, | 2 | 0.046761 |
RFK | chr9 | 79004212 | 79004213 | rs11144870 | + | C | C/T | single | intron | 13 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SC_SNP,SSMP,TISHKOFF, | 2 | 0.885888 |
RFK | chr9 | 79004465 | 79004466 | rs10429486 | + | A | A/G | single | intron | 7 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,HGSV,ILLUMINA-UK,PJP,TISHKOFF, | 2 | 0.977585 |
RFK | chr9 | 79005262 | 79005263 | rs4745541 | + | T | A/T | single | intron | 12 | 1000GENOMES,BCM-HGSC-SUB,BGI,BL,COMPLETE_GENOMICS,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.328139 |
RFK | chr9 | 79005389 | 79005390 | rs2501923 | - | T | A/C | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.420501 |
RFK | chr9 | 79005413 | 79005414 | rs72745150 | + | T | C/T | single | intron | 6 | 1000GENOMES,BCM-HGSC-SUB,BGI,GMI,SSMP,TISHKOFF, | 2 | 0.139196 |
RFK | chr9 | 79005657 | 79005657 | rs57799710 | + | - | -/AA/CA | insertion | intron | 6 | 1000GENOMES,GMI,HGSV,LUNTER,SSMP,TISHKOFF, | 2 | 0.564738 |
RFK | chr9 | 79006053 | 79006054 | rs35800025 | + | T | C/T | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,PJP, | 2 | 0.017874 |
RFK | chr9 | 79006240 | 79006241 | rs77002584 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCM-HGSC-SUB,BGI,GMI,ILLUMINA,SSMP,TISHKOFF, | 2 | 0.920944 |
RFK | chr9 | 79006960 | 79006961 | rs116615581 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.968206 |
RFK | chr9 | 79007264 | 79007265 | rs12349438 | + | C | C/T | single | intron | 6 | 1000GENOMES,HGSV,ILLUMINA-UK,PJP,SC_SNP,TISHKOFF, | 2 | 0.981651 |
RFK | chr9 | 79007607 | 79007608 | rs35031885 | + | G | A/G | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,HUMANGENOME_JCVI,SI_EXO, | 2 | 0.019231 |
RFK | chr9 | 79007717 | 79007718 | rs11144871 | + | G | A/G | single | intron | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA-UK,PJP,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.298467 |
RFK | chr9 | 79007739 | 79007740 | rs138869946 | + | C | C/T | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.987144 |
RFK | chr9 | 79007785 | 79007786 | rs11144872 | + | C | C/T | single | intron | 8 | 1000GENOMES,CSHL-HAPMAP,ENSEMBL,HGSV,ILLUMINA-UK,PJP,SC_SNP,TISHKOFF, | 2 | 0.980787 |
RFK | chr9 | 79007810 | 79007811 | rs2251604 | - | T | A/G | single | intron | 19 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL, | 2 | 0.419900 |
RFK | chr9 | 79008112 | 79008113 | rs146379228 | + | A | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.989899 |
RFK | chr9 | 79008242 | 79008243 | rs2501922 | - | T | A/G | single | intron | 11 | 1000GENOMES,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.421775 |
RFK | chr9 | 79008283 | 79008284 | rs2490581 | + | A | A/G | single | intron | 17 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HUMANGENOME_JCVI,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.072212 |
RFK | chr9 | 79008304 | 79008305 | rs35432738 | + | C | C/T | single | intron | 3 | 1000GENOMES,ABI,HUMANGENOME_JCVI, | 2 | 0.978440 |
RFK | chr9 | 79008450 | 79008451 | rs7022515 | + | C | C/T | single | intron | 4 | 1000GENOMES,BCM_SSAHASNP,ILLUMINA,TISHKOFF, | 2 | 0.989918 |
RFK | chr9 | 79008643 | 79008644 | rs62567919 | + | G | G/T | single | intron | 6 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,ENSEMBL,SSMP,TISHKOFF, | 2 | 0.801831 |
RFK | chr9 | 79008673 | 79008674 | rs7045064 | + | T | C/T | single | intron | 7 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,TISHKOFF, | 2 | 0.026690 |
RFK | chr9 | 79008946 | 79008947 | rs41288757 | + | C | C/T | single | intron | 3 | 1000GENOMES,HGSV,SI_EXO, | 2 | 0.983930 |
AIFM1 | chrX | 129264825 | 129264826 | rs139484016 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983071 |
AIFM1 | chrX | 129265393 | 129265394 | rs210023 | - | A | C/T | single | intron | 23 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 3 | 0.038061 |
AIFM1 | chrX | 129267708 | 129267709 | rs190380944 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.987908 |
AIFM1 | chrX | 129268388 | 129268389 | rs586041 | - | T | A/T | single | intron | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PERLEGEN,SC_JCM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL, | 3 | 0.010835 |
AIFM1 | chrX | 129269779 | 129269780 | rs209997 | + | G | C/G | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 3 | 0.005865 |
AIFM1 | chrX | 129269979 | 129269980 | rs209998 | + | G | A/G | single | intron | 24 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SC_SNP,SI_EXO,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 5 | 0.015764 |
AIFM1 | chrX | 129271797 | 129271798 | rs142046747 | + | G | A/G | single | intron,untranslated-5 | 1 | 1000GENOMES, | 2 | 0.012696 |
AIFM1 | chrX | 129272440 | 129272441 | rs12010190 | + | A | A/G | single | intron,near-gene-5 | 4 | 1000GENOMES,ABI,CSHL-HAPMAP,TISHKOFF, | 2 | 0.980048 |
AIFM1 | chrX | 129272448 | 129272449 | rs182805215 | + | T | A/T | single | intron,near-gene-5 | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.029021 |
AIFM1 | chrX | 129272448 | 129272449 | rs200686111 | + | T | -/T | deletion | intron,near-gene-5 | 1 | 1000GENOMES, | 2 | 0.024184 |
AIFM1 | chrX | 129272519 | 129272520 | rs12014323 | + | C | C/T | single | intron,near-gene-5 | 9 | 1000GENOMES,ABI,AFFY,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,TISHKOFF, | 2 | 0.968689 |
AIFM1 | chrX | 129272616 | 129272617 | rs12014115 | + | G | A/G | single | coding-synon,intron,near-gene-5 | 9 | 1000GENOMES,ABI,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,ILLUMINA,NHLBI-ESP,SSAHASNP,TISHKOFF, | 2 | 0.033072 |
AIFM1 | chrX | 129273247 | 129273248 | rs209999 | + | A | A/G | single | intron,near-gene-5 | 14 | 1000GENOMES,ABI,BCMHGSC_JDW,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.553679 |
AIFM1 | chrX | 129274955 | 129274956 | rs210000 | + | C | C/T | single | intron | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.003544 |
AIFM1 | chrX | 129277092 | 129277093 | rs188336 | + | T | G/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.444498 |
AIFM1 | chrX | 129277887 | 129277888 | rs176708 | + | G | G/T | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.522195 |
AIFM1 | chrX | 129277963 | 129277964 | rs5977212 | + | A | A/C | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.980048 |
AIFM1 | chrX | 129278201 | 129278202 | rs7050171 | + | C | C/G | single | intron | 4 | 1000GENOMES,AFFY,BCM_SSAHASNP,KRIBB_YJKIM, | 2 | 0.989401 |
AIFM1 | chrX | 129279022 | 129279023 | rs73225599 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.975816 |
AIFM1 | chrX | 129279647 | 129279648 | rs12559753 | + | C | C/T | single | intron | 7 | 1000GENOMES,BCMHGSC_JDW,CSHL-HAPMAP,ENSEMBL,ILLUMINA,SI_EXO,SSMP, | 2 | 0.922356 |
AIFM1 | chrX | 129280279 | 129280280 | rs210001 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,BCM_SSAHASNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 2 | 0.431184 |
AIFM1 | chrX | 129280719 | 129280720 | rs210002 | + | A | A/G | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 5 | 0.014127 |
AIFM1 | chrX | 129280767 | 129280768 | rs210003 | + | C | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.536552 |
AIFM1 | chrX | 129281845 | 129281846 | rs61730894 | + | C | C/T | single | intron,missense | 1 | CORNELL, | 2 | 0.987179 |
AIFM1 | chrX | 129281937 | 129281938 | rs149692850 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010278 |
AIFM1 | chrX | 129282230 | 129282231 | rs210004 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 3 | 0.014369 |
AIFM1 | chrX | 129282582 | 129282583 | rs188337 | + | C | C/T | single | intron | 9 | 1000GENOMES,BCMHGSC_JDW,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,SSMP,TISHKOFF, | 2 | 0.571687 |
AIFM1 | chrX | 129282803 | 129282804 | rs187065966 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.983071 |
AIFM1 | chrX | 129282999 | 129283000 | rs142298610 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.980048 |
AIFM1 | chrX | 129283124 | 129283125 | rs35075538 | + | G | A/G | single | intron | 8 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.445247 |
AIFM1 | chrX | 129283519 | 129283520 | rs1139851 | - | A | C/T | single | coding-synon,intron | 27 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,CANCER-GENOME,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SEQUENOM,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.003894 |
AIFM1 | chrX | 129283660 | 129283661 | rs150442514 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.016324 |
AIFM1 | chrX | 129283785 | 129283786 | rs3213522 | + | A | A/G | single | intron | 15 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 2 | 0.528537 |
AIFM1 | chrX | 129284395 | 129284396 | rs7058548 | + | T | C/T | single | intron | 8 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,HGSV,PJP,SSMP,TISHKOFF, | 2 | 0.082126 |
AIFM1 | chrX | 129284727 | 129284728 | rs149201346 | + | C | C/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.980048 |
AIFM1 | chrX | 129285138 | 129285139 | rs191687618 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.016929 |
AIFM1 | chrX | 129285408 | 129285409 | rs209535 | + | C | C/T | single | intron | 14 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.557160 |
AIFM1 | chrX | 129286649 | 129286650 | rs144561581 | + | G | A/G | single | intron | 3 | 1000GENOMES,GMI,SSMP, | 2 | 0.019952 |
AIFM1 | chrX | 129286718 | 129286719 | rs209536 | + | C | A/C | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 1.000000 |
AIFM1 | chrX | 129286854 | 129286855 | rs150754260 | + | C | C/T | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.983071 |
AIFM1 | chrX | 129287125 | 129287126 | rs209537 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.528597 |
AIFM1 | chrX | 129287322 | 129287323 | rs188222453 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.010883 |
AIFM1 | chrX | 129287515 | 129287516 | rs5932720 | + | C | C/G | single | intron | 7 | 1000GENOMES,AFFY,BCMHGSC_JDW,ENSEMBL,PJP,SC_SNP,SSMP, | 2 | 0.913693 |
AIFM1 | chrX | 129288673 | 129288674 | rs147876553 | + | C | C/G | single | intron | 4 | 1000GENOMES,GMI,SSMP,TISHKOFF, | 2 | 0.976421 |
AIFM1 | chrX | 129289011 | 129289012 | rs148519394 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.989117 |
AIFM1 | chrX | 129289945 | 129289945 | rs77468639 | + | - | -/C/T | insertion | intron | 2 | 1000GENOMES,BGI, | 2 | 0.000000 |
AIFM1 | chrX | 129289946 | 129289946 | rs57695061 | + | - | -/C | insertion | intron | 6 | 1000GENOMES,BILGI_BIOE,BUSHMAN,GMI,HGSV,TISHKOFF, | 2 | 0.000000 |
AIFM1 | chrX | 129290698 | 129290699 | rs189994 | + | T | C/T | single | intron | 20 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SI_EXO,SSMP,TISHKOFF, | 5 | 0.015760 |
AIFM1 | chrX | 129290753 | 129290754 | rs5977215 | + | C | C/T | single | intron | 9 | 1000GENOMES,AFFY,BCMHGSC_JDW,ENSEMBL,KRIBB_YJKIM,PERLEGEN,SC_SNP,SI_EXO,SSMP, | 3 | 0.033060 |
AIFM1 | chrX | 129291183 | 129291184 | rs5977216 | + | G | A/G | single | intron | 17 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 3 | 0.030817 |
AIFM1 | chrX | 129291710 | 129291711 | rs523234 | - | T | A/G | single | intron | 12 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,ENSEMBL,GMI,HGSV,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.545783 |
AIFM1 | chrX | 129292983 | 129292984 | rs694727 | + | A | A/T | single | intron | 15 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.556518 |
AIFM1 | chrX | 129293096 | 129293097 | rs12390789 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,SC_SNP,TISHKOFF, | 2 | 0.983543 |
AIFM1 | chrX | 129293760 | 129293761 | rs396278 | + | T | C/T | single | intron | 12 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.011439 |
AIFM1 | chrX | 129293897 | 129293898 | rs496225 | + | C | C/G | single | intron | 12 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PJP,SC_JCM,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.545509 |
AIFM1 | chrX | 129294301 | 129294302 | rs5930380 | + | T | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 3 | 0.030766 |
AIFM1 | chrX | 129295376 | 129295377 | rs191310973 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.984885 |
AIFM1 | chrX | 129295498 | 129295499 | rs634483 | - | A | G/T | single | intron | 3 | 1000GENOMES,KWOK,SC_JCM, | 2 | 0.048972 |
AIFM1 | chrX | 129295779 | 129295780 | rs142885842 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.974002 |
AIFM1 | chrX | 129296393 | 129296394 | rs23963 | - | T | A/G | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 3 | 0.038258 |
AIFM1 | chrX | 129296413 | 129296414 | rs23962 | - | G | C/G | single | intron | 22 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP, | 3 | 0.050814 |
AIFM1 | chrX | 129296593 | 129296594 | rs5975174 | + | T | A/T | single | intron | 5 | 1000GENOMES,AFFY,KRIBB_YJKIM,SC_SNP,TISHKOFF, | 2 | 0.018146 |
AIFM1 | chrX | 129296706 | 129296707 | rs209543 | - | C | A/G | single | intron | 18 | 1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.480088 |
AIFM1 | chrX | 129297109 | 129297110 | rs146843672 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.987908 |
AIFM1 | chrX | 129297274 | 129297275 | rs209542 | - | C | A/G | single | intron | 13 | 1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SC_SNP,TISHKOFF, | 2 | 0.466554 |
AIFM1 | chrX | 129297410 | 129297411 | rs58436038 | + | C | A/C | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,HGSV, | 2 | 0.022947 |
AIFM1 | chrX | 129297832 | 129297833 | rs141106030 | + | A | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.986699 |
AIFM1 | chrX | 129297857 | 129297858 | rs209541 | - | G | C/T | single | intron | 12 | 1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KWOK,PJP,SC_JCM,SSMP,TISHKOFF, | 2 | 0.556024 |
AIFM1 | chrX | 129298138 | 129298139 | rs209540 | - | C | A/G | single | intron | 12 | 1000GENOMES,ABI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,KWOK,PJP,SC_JCM,SSAHASNP,TISHKOFF,WI_SSAHASNP, | 2 | 0.435542 |
AIFM1 | chrX | 129299131 | 129299132 | rs147411389 | + | G | A/G | single | intron | 2 | 1000GENOMES,ILLUMINA, | 2 | 0.010278 |
CYBB | chrX | 37639746 | 37639747 | rs34798967 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,RSG_UW, | 3 | 0.007871 |
CYBB | chrX | 37640004 | 37640004 | rs199646090 | + | - | -/TCTA | insertion | intron | 1 | 1000GENOMES, | 2 | 0.870012 |
CYBB | chrX | 37640196 | 37640197 | rs140037852 | + | A | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.954655 |
CYBB | chrX | 37640744 | 37640745 | rs10442522 | + | T | C/T | single | intron | 3 | 1000GENOMES,SC_SNP,TISHKOFF, | 2 | 0.010883 |
CYBB | chrX | 37640952 | 37640952 | rs199659333 | + | - | -/G | insertion | intron | 1 | 1000GENOMES, | 2 | 0.967956 |
CYBB | chrX | 37640953 | 37640953 | rs200718778 | + | - | -/T | insertion | intron | 1 | 1000GENOMES, | 2 | 0.967956 |
CYBB | chrX | 37640954 | 37640954 | rs35508209 | + | - | -/T | insertion | intron | 2 | RSG_UW,TISHKOFF, | 3 | 0.869048 |
CYBB | chrX | 37641483 | 37641484 | rs7059081 | + | C | C/G | single | intron | 9 | 1000GENOMES,AFFY,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,RSG_UW,SNP500CANCER, | 3 | 0.005419 |
CYBB | chrX | 37641525 | 37641526 | rs4422908 | + | C | A/C | single | intron | 21 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,DEVINE_LAB,GMI,HGSV,ILLUMINA,ILLUMINA-UK,IMCJ-GDT,KRIBB_YJKIM,PJP,RSG_UW,SC_JCM,SC_SNP,SNP500CANCER,SSMP,TISHKOFF, | 3 | 0.027660 |
CYBB | chrX | 37641933 | 37641934 | rs35433602 | + | G | A/G | single | intron | 3 | 1000GENOMES,RSG_UW,TISHKOFF, | 3 | 0.010357 |
CYBB | chrX | 37642404 | 37642405 | rs4595265 | + | G | G/T | single | intron | 11 | 1000GENOMES,ABI,BGI,DEVINE_LAB,GMI,ILLUMINA,KRIBB_YJKIM,RSG_UW,SC_JCM,SC_SNP,SSMP, | 3 | 0.005102 |
CYBB | chrX | 37642602 | 37642603 | rs35687444 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,RSG_UW, | 3 | 0.010870 |
CYBB | chrX | 37642901 | 37642902 | rs6610661 | + | A | A/G | single | intron | 8 | 1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,RSG_UW,SC_SNP,SNP500CANCER, | 3 | 0.005994 |
CYBB | chrX | 37643241 | 37643242 | rs34556495 | + | T | G/T | single | intron | 3 | 1000GENOMES,ILLUMINA,RSG_UW, | 3 | 0.009759 |
CYBB | chrX | 37643378 | 37643379 | rs6417871 | + | C | C/T | single | intron | 18 | 1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.006356 |
CYBB | chrX | 37643667 | 37643668 | rs6651773 | + | A | A/G | single | intron | 11 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SC_SNP,SSMP,TISHKOFF, | 2 | 0.822430 |
CYBB | chrX | 37643953 | 37643954 | rs73632406 | + | T | A/T | single | intron | 2 | 1000GENOMES,ILLUMINA-UK, | 2 | 0.035024 |
CYBB | chrX | 37643954 | 37643954 | rs202233517 | + | - | -/A | insertion | intron | 1 | 1000GENOMES, | 2 | 0.971584 |
CYBB | chrX | 37644424 | 37644425 | rs6520785 | + | C | C/G | single | intron | 13 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.010471 |
CYBB | chrX | 37644605 | 37644606 | rs17312212 | + | A | A/G | single | intron | 5 | 1000GENOMES,CSHL-HAPMAP,ILLUMINA,PERLEGEN,SSMP, | 3 | 0.010407 |
CYBB | chrX | 37644711 | 37644712 | rs140248108 | + | T | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,TISHKOFF, | 2 | 0.017533 |
CYBB | chrX | 37645375 | 37645376 | rs151166183 | + | G | A/G | single | intron | 2 | 1000GENOMES,TISHKOFF, | 2 | 0.017533 |
CYBB | chrX | 37645726 | 37645727 | rs5964099 | + | T | C/T | single | intron | 15 | 1000GENOMES,BCM_SSAHASNP,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF, | 3 | 0.006086 |
CYBB | chrX | 37645884 | 37645885 | rs17146226 | + | G | A/G | single | intron | 3 | 1000GENOMES,PERLEGEN,TISHKOFF, | 3 | 0.010870 |
CYBB | chrX | 37647861 | 37647862 | rs140504495 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012092 |
CYBB | chrX | 37647941 | 37647942 | rs143681625 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.010883 |
CYBB | chrX | 37648572 | 37648574 | rs112829288 | + | AG | -/AG | deletion | intron | 2 | 1000GENOMES,BUSHMAN, | 2 | 0.059179 |
CYBB | chrX | 37648843 | 37648844 | rs148107944 | + | T | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012092 |
CYBB | chrX | 37648892 | 37648892 | rs78961174 | + | - | -/A | insertion | intron | 3 | 1000GENOMES,BGI,GMI, | 2 | 0.842201 |
CYBB | chrX | 37648972 | 37648973 | rs5964107 | + | G | A/G | single | intron | 10 | 1000GENOMES,BGI,BUSHMAN,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SC_SNP,SSMP, | 2 | 0.329960 |
CYBB | chrX | 37649934 | 37649935 | rs17146228 | + | G | G/T | single | intron | 2 | 1000GENOMES,PERLEGEN, | 3 | 0.010840 |
CYBB | chrX | 37650439 | 37650440 | rs138587474 | + | C | C/T | single | intron | 1 | 1000GENOMES, | 2 | 0.957074 |
CYBB | chrX | 37650692 | 37650693 | rs34019674 | + | G | A/G | single | intron | 2 | 1000GENOMES,RSG_UW, | 3 | 0.010333 |
CYBB | chrX | 37650758 | 37650759 | rs17146231 | + | T | A/T | single | intron | 3 | 1000GENOMES,PERLEGEN,RSG_UW, | 3 | 0.018519 |
CYBB | chrX | 37650904 | 37650905 | rs34077421 | + | A | A/C | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,RSG_UW, | 3 | 0.010297 |
CYBB | chrX | 37651008 | 37651009 | rs35840291 | + | T | C/T | single | intron | 2 | 1000GENOMES,RSG_UW, | 3 | 0.010870 |
CYBB | chrX | 37651468 | 37651469 | rs35651685 | + | T | A/T | single | intron | 2 | 1000GENOMES,RSG_UW, | 3 | 0.010907 |
CYBB | chrX | 37651662 | 37651663 | rs4827298 | + | T | C/T | single | intron | 17 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,PERLEGEN,PJP,RSG_UW,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.018583 |
CYBB | chrX | 37651718 | 37651719 | rs5964113 | + | G | A/G | single | intron | 5 | 1000GENOMES,ILLUMINA,RSG_UW,SC_SNP,TISHKOFF, | 3 | 0.008829 |
CYBB | chrX | 37652517 | 37652518 | rs5917471 | + | C | C/T | single | intron | 19 | 1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,RSG_UW,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 3 | 0.011189 |
CYBB | chrX | 37652613 | 37652614 | rs34097325 | + | A | A/G | single | intron | 5 | 1000GENOMES,ABI,ENSEMBL,ILLUMINA,RSG_UW, | 3 | 0.010845 |
CYBB | chrX | 37653140 | 37653141 | rs6610669 | + | C | C/T | single | intron | 9 | 1000GENOMES,BGI,GMI,PERLEGEN,RSG_UW,SC_SNP,SI_EXO,SSMP,TISHKOFF, | 3 | 0.022222 |
CYBB | chrX | 37653142 | 37653143 | rs35337171 | + | C | C/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,RSG_UW, | 3 | 0.202128 |
CYBB | chrX | 37653266 | 37653267 | rs17146242 | + | T | C/T | single | intron | 3 | 1000GENOMES,PERLEGEN,RSG_UW, | 3 | 0.018993 |
CYBB | chrX | 37654135 | 37654136 | rs12014060 | + | T | C/T | single | intron | 11 | 1000GENOMES,ABI,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,SSMP,TISHKOFF, | 2 | 0.165865 |
CYBB | chrX | 37654251 | 37654252 | rs112306617 | + | T | C/T | single | intron | 4 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,TISHKOFF, | 2 | 0.015710 |
CYBB | chrX | 37654359 | 37654360 | rs3935493 | - | C | C/G | single | intron | 5 | 1000GENOMES,AFFY,KRIBB_YJKIM,PERLEGEN,TSC-CSHL, | 3 | 0.015556 |
CYBB | chrX | 37654945 | 37654946 | rs35851882 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,RSG_UW,TISHKOFF, | 3 | 0.010857 |
CYBB | chrX | 37655021 | 37655022 | rs35578419 | + | A | A/G | single | intron | 3 | 1000GENOMES,GMI,RSG_UW, | 3 | 0.010870 |
CYBB | chrX | 37655654 | 37655655 | rs35959988 | + | A | A/C | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,RSG_UW,TISHKOFF, | 3 | 0.010870 |
CYBB | chrX | 37655735 | 37655739 | rs35574346 | + | AAAC | -/AAAC | deletion | intron | 3 | GMI,RSG_UW,SSMP, | 2 | 0.163043 |
CYBB | chrX | 37655740 | 37655744 | rs199704403 | + | AACC | -/AACC | deletion | intron | 1 | 1000GENOMES, | 2 | 0.123942 |
CYBB | chrX | 37655802 | 37655804 | rs200800216 | + | TT | -/TT | deletion | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.010278 |
CYBB | chrX | 37656565 | 37656566 | rs139892460 | + | C | C/T | single | intron | 2 | 1000GENOMES,SSMP, | 2 | 0.986094 |
CYBB | chrX | 37657891 | 37657892 | rs34052166 | + | T | A/T | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,RSG_UW,TISHKOFF, | 3 | 0.010857 |
CYBB | chrX | 37657911 | 37657912 | rs34602937 | + | T | G/T | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,RSG_UW, | 3 | 0.010857 |
CYBB | chrX | 37658061 | 37658062 | rs35015762 | + | A | A/G | single | intron | 5 | 1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,RSG_UW, | 3 | 0.008426 |
CYBB | chrX | 37658388 | 37658389 | rs34065977 | + | C | C/T | single | intron | 7 | 1000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,RSG_UW,SNP500CANCER, | 3 | 0.008197 |
CYBB | chrX | 37658454 | 37658455 | rs5964125 | + | A | A/G | single | intron | 14 | 1000GENOMES,ABI,BGI,CSHL-HAPMAP,ENSEMBL,GMI,IMCJ-GDT,PERLEGEN,RSG_UW,SC_SNP,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF, | 3 | 0.015566 |
CYBB | chrX | 37658724 | 37658725 | rs35037870 | + | C | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,RSG_UW, | 3 | 0.008821 |
CYBB | chrX | 37658746 | 37658747 | rs147083599 | + | T | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.012696 |
CYBB | chrX | 37659055 | 37659056 | rs5963309 | + | A | A/G | single | intron | 11 | 1000GENOMES,AFFY,BGI,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,RSG_UW,SC_SNP,SSMP,TISHKOFF, | 3 | 0.034033 |
CYBB | chrX | 37659252 | 37659253 | rs73632407 | + | A | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA-UK,TISHKOFF, | 2 | 0.966184 |
CYBB | chrX | 37659561 | 37659562 | rs5963310 | + | T | A/T | single | intron | 13 | 1000GENOMES,ABI,AFFY,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA-UK,PERLEGEN,SC_SNP,SSMP,TISHKOFF, | 3 | 0.017703 |
CYBB | chrX | 37660049 | 37660050 | rs144619445 | + | C | A/C | single | intron | 1 | 1000GENOMES, | 2 | 0.012092 |
CYBB | chrX | 37660209 | 37660210 | rs113353909 | + | T | C/T | single | intron | 3 | 1000GENOMES,BUSHMAN,TISHKOFF, | 2 | 0.027190 |
CYBB | chrX | 37660427 | 37660428 | rs35670962 | + | T | G/T | single | intron | 2 | 1000GENOMES,RSG_UW, | 3 | 0.009748 |
CYBB | chrX | 37660876 | 37660877 | rs191514138 | + | G | G/T | single | intron | 1 | 1000GENOMES, | 2 | 0.968561 |
CYBB | chrX | 37660918 | 37660919 | rs35839491 | + | G | A/G | single | intron | 3 | 1000GENOMES,RSG_UW,TISHKOFF, | 3 | 0.008631 |
CYBB | chrX | 37660941 | 37660942 | rs35316892 | + | G | A/G | single | intron | 3 | 1000GENOMES,ILLUMINA,RSG_UW, | 3 | 0.008631 |
CYBB | chrX | 37661362 | 37661363 | rs34876447 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,RSG_UW, | 3 | 0.010870 |
CYBB | chrX | 37661417 | 37661418 | rs34189524 | + | T | C/T | single | intron | 3 | 1000GENOMES,RSG_UW,TISHKOFF, | 3 | 0.010870 |
CYBB | chrX | 37661444 | 37661445 | rs34090774 | + | G | A/G | single | intron | 5 | 1000GENOMES,HGSV,ILLUMINA-UK,RSG_UW,TISHKOFF, | 3 | 0.010857 |
CYBB | chrX | 37662276 | 37662277 | rs139887290 | + | G | A/G | single | intron | 1 | 1000GENOMES, | 2 | 0.033253 |
CYBB | chrX | 37662368 | 37662369 | rs17146255 | + | C | C/T | single | intron | 6 | 1000GENOMES,BGI,GMI,PERLEGEN,SSMP,TISHKOFF, | 3 | 0.010840 |
CYBB | chrX | 37662577 | 37662579 | rs201808383 | + | CT | -/CT | deletion | intron | 1 | 1000GENOMES, | 2 | 0.033253 |
CYBB | chrX | 37664107 | 37664108 | rs35724386 | + | C | C/T | single | intron | 2 | 1000GENOMES,RSG_UW, | 3 | 0.010321 |
CYBB | chrX | 37664439 | 37664440 | rs34834015 | + | C | C/G/T | single | intron | 10 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,CORRELAGEN,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,RSG_UW,SNP500CANCER,TISHKOFF, | 4 | 0.009130 |
CYBB | chrX | 37664787 | 37664788 | rs34406087 | + | T | C/T | single | intron | 4 | 1000GENOMES,ILLUMINA-UK,RSG_UW,TISHKOFF, | 3 | 0.010321 |
CYBB | chrX | 37664810 | 37664811 | rs35773320 | + | A | A/G | single | intron | 6 | 1000GENOMES,BGI,GMI,RSG_UW,SSMP,TISHKOFF, | 3 | 0.010333 |
CYBB | chrX | 37664839 | 37664840 | rs34697490 | + | C | C/T | single | intron | 3 | 1000GENOMES,ILLUMINA,RSG_UW, | 3 | 0.010333 |
CYBB | chrX | 37664977 | 37664978 | rs12011274 | + | A | A/G | single | intron | 6 | 1000GENOMES,ABI,CSHL-HAPMAP,ENSEMBL,ILLUMINA,RSG_UW, | 3 | 0.008507 |
CYBB | chrX | 37665299 | 37665300 | rs35629501 | + | A | A/G | single | intron | 3 | 1000GENOMES,RSG_UW,TISHKOFF, | 3 | 0.009748 |
CYBB | chrX | 37665813 | 37665814 | rs35385341 | + | C | C/T | single | intron | 3 | 1000GENOMES,NHLBI-ESP,RSG_UW, | 3 | 0.010309 |
CYBB | chrX | 37665981 | 37665982 | rs34571491 | + | C | C/G | single | intron | 3 | 1000GENOMES,COMPLETE_GENOMICS,RSG_UW, | 3 | 0.010857 |
CYBB | chrX | 37666130 | 37666131 | rs5964146 | + | G | C/G | single | intron | 8 | 1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,RSG_UW,SC_SNP,TISHKOFF, | 3 | 0.010814 |
CYBB | chrX | 37666145 | 37666145 | rs200426524 | + | - | -/TC | insertion | intron | 1 | 1000GENOMES, | 2 | 0.890568 |
CYBB | chrX | 37666150 | 37666151 | rs72619429 | + | G | C/G | single | intron | 4 | 1000GENOMES,BGI,GMI,TISHKOFF, | 2 | 0.123337 |
CYBB | chrX | 37666244 | 37666245 | rs12848910 | + | A | A/G | single | intron | 8 | 1000GENOMES,ABI,ENSEMBL,ILLUMINA,PERLEGEN,PJP,RSG_UW,SSAHASNP, | 3 | 0.047876 |
CYBB | chrX | 37667430 | 37667431 | rs7886998 | + | T | C/T | single | intron | 8 | 1000GENOMES,BGI,GMI,HGSV,ILLUMINA-UK,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.159420 |
CYBB | chrX | 37669693 | 37669694 | rs5964149 | + | A | A/G | single | intron | 16 | 1000GENOMES,BGI,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KYUGEN,PERLEGEN,RSG_UW,SC_SNP,SNP500CANCER,SSMP,TISHKOFF, | 3 | 0.010017 |
CYBB | chrX | 37669698 | 37669699 | rs28667482 | + | G | G/T | single | intron | 6 | 1000GENOMES,BUSHMAN,RSG_UW,SNP500CANCER,SSAHASNP,TISHKOFF, | 3 | 0.009157 |