Gene Symbol | Chromosome | Start | End | rs ID | Strand | NCBI ref | Observed | Class | Function | Submitter Count | Submitter | Frequency Count | Allele Frequency |
---|
TXNRD2 | chr22 | 19867770 | 19867771 | rs1139795 | - | C | A/G | single | coding-synon | 20 | 1000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LEE,NHLBI-ESP,PJP,SEATTLESEQ,SEQUENOM,SI_EXO,SSMP,TISHKOFF, | 2 | 0.217342 |
TXNRD2 | chr22 | 19868227 | 19868228 | rs35544159 | - | G | C/T | single | coding-synon | 6 | 1000GENOMES,APPLERA_GI,CLINSEQ_SNP,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ, | 2 | 0.986312 |
TXNRD2 | chr22 | 19906510 | 19906511 | rs11541479 | - | G | C/T | single | coding-synon | 17 | 1000GENOMES,ABI,BCMHGSC_JDW,CGAP-GAI,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SSMP, | 2 | 0.828670 |
TXNRD2 | chr22 | 19907117 | 19907118 | rs5748470 | + | G | A/G | single | coding-synon | 21 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.581461 |
ACAD9 | chr3 | 128614184 | 128614185 | rs1680778 | + | A | A/C | single | coding-synon,ncRNA | 24 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SEATTLESEQ,SSMP,TISHKOFF, | 3 | 0.501608 |
ACAD9 | chr3 | 128618282 | 128618283 | rs1979529 | + | T | C/T | single | coding-synon,ncRNA | 10 | 1000GENOMES,BCMHGSC_JDW,CLINSEQ_SNP,CORNELL,CSHL-HAPMAP,ENSEMBL,ILLUMINA,NHLBI-ESP,SSMP,TSC-CSHL, | 2 | 0.028382 |
ACAD9 | chr3 | 128627932 | 128627933 | rs876755 | + | C | C/T | single | coding-synon,ncRNA | 24 | 1000GENOMES,ABI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE, | 2 | 0.722999 |
ACOX2 | chr3 | 58512236 | 58512237 | rs1127745 | - | A | C/T | single | coding-synon | 21 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,NHLBI-ESP,PERLEGEN,PJP,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF, | 2 | 0.281897 |
ACOX2 | chr3 | 58512284 | 58512285 | rs13097249 | + | T | C/T | single | coding-synon | 12 | 1000GENOMES,AFFY,CLINSEQ_SNP,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PJP,SEATTLESEQ,SSAHASNP,TISHKOFF, | 2 | 0.068391 |
ACOX2 | chr3 | 58512374 | 58512375 | rs1127743 | - | T | A/G | single | coding-synon | 14 | 1000GENOMES,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,GMI,HGSV,ILLUMINA,LEE,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 4 | 0.826120 |
ACOX2 | chr3 | 58517519 | 58517520 | rs57216393 | + | A | A/G | single | coding-synon | 9 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.923032 |
MTRR | chr5 | 7866966 | 7866967 | rs162030 | + | G | C/G | single | coding-synon,intron | 27 | 1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.822946 |
MTRR | chr5 | 7867026 | 7867027 | rs77130393 | + | A | A/G | single | coding-synon,intron | 4 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.983853 |
MTRR | chr5 | 7878191 | 7878192 | rs161870 | + | T | C/T | single | coding-synon | 23 | 1000GENOMES,ABI,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,NHLBI-ESP,PERLEGEN,PHARMGKB_PPII,PJP,SC_JCM,SEATTLESEQ,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.216049 |
MTRR | chr5 | 7889215 | 7889216 | rs2287779 | + | G | A/G | single | coding-synon | 16 | 1000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_PPII,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE, | 2 | 0.049650 |
MTRR | chr5 | 7892932 | 7892933 | rs35890938 | - | A | C/T | single | coding-synon | 8 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO, | 2 | 0.018837 |
MTRR | chr5 | 7893004 | 7893005 | rs34172797 | - | C | A/G | single | coding-synon | 8 | 1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO, | 2 | 0.019431 |
MTRR | chr5 | 7897060 | 7897061 | rs6874544 | + | T | C/T | single | coding-synon | 12 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,EXOME_CHIP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SNP500CANCER, | 2 | 0.018671 |
MTRR | chr5 | 7897282 | 7897283 | rs12347 | - | G | C/T | single | coding-synon | 26 | 1000GENOMES,ABI,APPLERA_GI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,LEE,NHLBI-ESP,PHARMGKB_PPII,PJP,SC_JCM,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.782141 |
MTRR | chr5 | 7897318 | 7897319 | rs1802059 | + | G | A/G | single | coding-synon | 23 | 1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_PPII,PJP,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF, | 2 | 0.296916 |
SDHA | chr5 | 224632 | 224633 | rs1139424 | + | A | A/G | single | coding-synon | 11 | 1000GENOMES,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,LEE,MGC_GENOME_DIFF,NHLBI-ESP,PJP,SI_EXO,SSMP,WI_SSAHASNP, | 2 | 0.780042 |
SDHA | chr5 | 226159 | 226160 | rs6555055 | + | A | A/C | single | coding-synon | 21 | 1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,CANCER-GENOME,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LARRIBA,NHLBI-ESP,PJP,SEATTLESEQ,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.750778 |
SDHA | chr5 | 228361 | 228362 | rs2115272 | - | T | A/G | single | coding-synon | 18 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,HGSV,ILLUMINA-UK,LARRIBA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE, | 2 | 0.754177 |
SDHA | chr5 | 231041 | 231042 | rs34771391 | + | C | C/T | single | coding-synon | 5 | 1000GENOMES,CLINSEQ_SNP,ILLUMINA,LARRIBA,NHLBI-ESP, | 2 | 0.989329 |
SDHA | chr5 | 231110 | 231111 | rs1126417 | + | T | C/T | single | coding-synon | 25 | 1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LARRIBA,LEE,MGC_GENOME_DIFF,NHLBI-ESP,PJP,SEATTLESEQ,SEQUENOM,SSAHASNP,SSMP,YUSUKE, | 2 | 0.727076 |
SDHA | chr5 | 233691 | 233692 | rs1062467 | + | T | C/T | single | coding-synon | 2 | LEE,SEQUENOM, | 2 | 0.810000 |
SDHA | chr5 | 233733 | 233734 | rs1041949 | + | C | C/G | single | coding-synon | 18 | 1000GENOMES,BCMHGSC_JDW,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,LARRIBA,LEE,NHLBI-ESP,PJP,SEATTLESEQ,SEQUENOM,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP, | 2 | 0.724995 |
SDHA | chr5 | 235363 | 235364 | rs35277230 | + | C | C/T | single | coding-synon | 9 | 1000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,HGSV,ILLUMINA-UK,LARRIBA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.898970 |
SDHA | chr5 | 236586 | 236587 | rs150831951 | + | G | G/T | single | coding-synon | 4 | 1000GENOMES,CLINSEQ_SNP,NHLBI-ESP,SSMP, | 2 | 0.986471 |
SDHA | chr5 | 236616 | 236617 | rs200223188 | + | G | A/G/T | single | coding-synon | 1 | CLINSEQ_SNP, | 3 | 0.002000 |
SDHA | chr5 | 236652 | 236653 | rs75091805 | + | C | A/C | single | coding-synon | 3 | 1000GENOMES,CLINSEQ_SNP,GMI, | 2 | 0.116910 |
SDHA | chr5 | 251468 | 251469 | rs10039029 | + | G | A/G | single | coding-synon | 7 | 1000GENOMES,BCMHGSC_JDW,CLINSEQ_SNP,ILLUMINA-UK,SI_EXO,SSMP,WI_SSAHASNP, | 2 | 0.165050 |
SDHA | chr5 | 251507 | 251508 | rs17415917 | + | G | A/G | single | coding-synon | 1 | SEQUENOM, | 2 | 0.030000 |
SDHA | chr5 | 251540 | 251541 | rs77210621 | + | A | A/G | single | coding-synon | 8 | 1000GENOMES,BCM-HGSC-SUB,BUSHMAN,CLINSEQ_SNP,ENSEMBL,NHLBI-ESP,SEATTLESEQ,SSMP, | 2 | 0.757013 |
SDHA | chr5 | 251564 | 251565 | rs1126538 | + | T | C/T | single | coding-synon | 6 | 1000GENOMES,EXOME_CHIP,LEE,NHLBI-ESP,SEATTLESEQ,SEQUENOM, | 2 | 0.014217 |
SDHA | chr5 | 254608 | 254609 | rs17415225 | + | T | C/T | single | coding-synon | 1 | SEQUENOM, | 2 | 0.620000 |
SDHA | chr5 | 256471 | 256472 | rs6961 | + | G | A/G | single | coding-synon | 18 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,LARRIBA,LEE,NHLBI-ESP,PJP,SEATTLESEQ,SEQUENOM,SSMP,WI_SSAHASNP, | 2 | 0.322600 |
SDHA | chr5 | 256513 | 256514 | rs1042446 | + | G | A/C/G | single | coding-synon | 4 | CLINSEQ_SNP,LEE,NHLBI-ESP,SEQUENOM, | 2 | 0.026873 |
ENPP1 | chr6 | 132190540 | 132190541 | rs9483347 | + | A | A/G | single | coding-synon | 5 | 1000GENOMES,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SC_SNP, | 2 | 0.985970 |
ENPP1 | chr6 | 132190552 | 132190553 | rs113723070 | + | T | C/T | single | coding-synon | 5 | 1000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP, | 2 | 0.014997 |
ENPP1 | chr6 | 132203489 | 132203490 | rs7750837 | + | T | C/T | single | coding-synon | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,WI_SSAHASNP, | 2 | 0.014780 |
ENPP1 | chr6 | 132211533 | 132211534 | rs1804025 | + | A | A/G | single | coding-synon | 15 | 1000GENOMES,ABI,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,HGBASE,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.915084 |
ENPP3 | chr6 | 131995312 | 131995313 | rs9493048 | + | A | A/G | single | coding-synon | 21 | 1000GENOMES,AFFY,APPLERA_GI,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF, | 2 | 0.739617 |
ENPP3 | chr6 | 132022418 | 132022419 | rs201739285 | + | G | A/G | single | coding-synon,intron | 2 | CLINSEQ_SNP,GMI, | 2 | 0.112500 |
ENPP3 | chr6 | 132030036 | 132030037 | rs56095307 | + | T | C/T | single | coding-synon,intron | 5 | 1000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP, | 2 | 0.053730 |
IYD | chr6 | 150719239 | 150719240 | rs73619510 | + | G | A/G | single | coding-synon,missense,untranslated-3 | 7 | 1000GENOMES,COMPLETE_GENOMICS,EXOME_CHIP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.016934 |
DLD | chr7 | 107542819 | 107542820 | rs2228664 | + | T | A/C/T | single | coding-synon | 10 | 1000GENOMES,BUSHMAN,CANCER-GENOME,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SEATTLESEQ,TISHKOFF,WIAF-CSNP, | 3 | 0.000126 |
DLD | chr7 | 107546803 | 107546804 | rs73726765 | + | T | C/T | single | coding-synon | 6 | 1000GENOMES,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ,TISHKOFF, | 2 | 0.015084 |
DLD | chr7 | 107556042 | 107556043 | rs1065762 | + | A | A/G | single | coding-synon | 9 | 1000GENOMES,BUSHMAN,CANCER-GENOME,ILLUMINA,NHLBI-ESP,PERLEGEN,SEATTLESEQ,TISHKOFF,WIAF-CSNP, | 2 | 0.988701 |
DLD | chr7 | 107558482 | 107558483 | rs1803921 | + | C | C/T | single | coding-synon | 9 | 1000GENOMES,CORNELL,HGBASE,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,TISHKOFF,WI_SSAHASNP, | 2 | 0.939288 |
DLD | chr7 | 107569516 | 107569517 | rs1131398 | - | A | C/T | single | coding-synon | 26 | 1000GENOMES,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,NHLBI-ESP,PERLEGEN,PJP,SEATTLESEQ,SEQUENOM,SI_EXO,SSAHASNP,SSMP,TISHKOFF,YUSUKE, | 2 | 0.452699 |
POR | chr7 | 75583324 | 75583325 | rs10262966 | + | A | A/G | single | coding-synon | 13 | 1000GENOMES,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,EGP_SNPS,HGSV,ILLUMINA,NHLBI-ESP,PHARMGKB_PMT,SSMP,TISHKOFF,WUGSC_SSAHASNP, | 2 | 0.933901 |
POR | chr7 | 75609676 | 75609677 | rs1135612 | + | A | A/G/T | single | coding-synon | 22 | 1000GENOMES,ABI,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,LEE,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,PHARMGKB_PMT,SNP500CANCER,SSMP,WIAF-CSNP,YUSUKE, | 3 | 0.715455 |
POR | chr7 | 75614952 | 75614953 | rs2228104 | + | T | C/T | single | coding-synon | 24 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,MGC_GENOME_DIFF,NHLBI-ESP,PHARMGKB_PMT,PJP,SSAHASNP,SSMP,TISHKOFF,WIAF-CSNP,WUGSC_SSAHASNP, | 2 | 0.822355 |
POR | chr7 | 75615286 | 75615287 | rs1057870 | + | G | A/G | single | coding-synon | 23 | 1000GENOMES,ABI,BCM-HGSC-SUB,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,LEE,NHLBI-ESP,PHARMGKB_AB_DME,PHARMGKB_PMT,PJP,SEQUENOM,SNP500CANCER,SSAHASNP,SSMP,TISHKOFF,WIAF-CSNP, | 2 | 0.173680 |
SUGCT | chr7 | 40174672 | 40174673 | rs7793074 | + | C | A/C | single | coding-synon,near-gene-5 | 4 | 1000GENOMES,ILLUMINA,NHLBI-ESP,WI_SSAHASNP, | 2 | 0.035714 |
SUGCT | chr7 | 40314164 | 40314165 | rs12669315 | + | G | A/G | single | coding-synon,intron | 13 | 1000GENOMES,ABI,AFFY,APPLERA_GI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SSMP,TISHKOFF, | 2 | 0.317389 |
SUGCT | chr7 | 40314242 | 40314243 | rs4637704 | + | A | A/G | single | coding-synon,intron | 15 | 1000GENOMES,ABI,BGI,BL,CLINSEQ_SNP,CSHL-HAPMAP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_JCM,SSMP,TISHKOFF, | 2 | 0.667015 |
SUGCT | chr7 | 40899966 | 40899967 | rs2010706 | + | G | C/G | single | coding-synon | 22 | 1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,WUGSC_SSAHASNP,YUSUKE, | 2 | 0.444095 |
SUGCT | chr7 | 40899987 | 40899988 | rs35870589 | + | G | A/G | single | coding-synon | 1 | APPLERA_GI, | 2 | 0.012820 |
SLC52A2 | chr8 | 145578295 | 145578296 | rs2272663 | - | A | C/T | single | coding-synon,ncRNA | 16 | 1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,WI_SSAHASNP,YUSUKE, | 2 | 0.549065 |
SLC52A2 | chr8 | 145579963 | 145579964 | rs75159950 | + | A | A/G | single | coding-synon,near-gene-5 | 4 | CLINSEQ_SNP,ENSEMBL,EXOME_CHIP,ILLUMINA, | 2 | 0.927680 |
SLC52A2 | chr8 | 145579966 | 145579967 | rs77157066 | + | T | C/T | single | coding-synon,near-gene-5 | 2 | CLINSEQ_SNP,ENSEMBL, | 2 | 0.073788 |
RFK | chr9 | 79003515 | 79003516 | rs10781358 | + | C | C/G | single | coding-synon | 17 | 1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,HGSV,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SI_EXO,SSMP,TISHKOFF, | 2 | 0.833527 |
AIFM1 | chrX | 129271131 | 129271132 | rs12007545 | + | T | C/T | single | coding-synon,untranslated-3,untranslated-5 | 9 | 1000GENOMES,ABI,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,TISHKOFF, | 2 | 0.032759 |
AIFM1 | chrX | 129272616 | 129272617 | rs12014115 | + | G | A/G | single | coding-synon,intron,near-gene-5 | 9 | 1000GENOMES,ABI,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,ILLUMINA,NHLBI-ESP,SSAHASNP,TISHKOFF, | 2 | 0.033072 |
AIFM1 | chrX | 129283519 | 129283520 | rs1139851 | - | A | C/T | single | coding-synon,intron | 27 | 1000GENOMES,ABI,AFFY,BCMHGSC_JDW,BUSHMAN,CANCER-GENOME,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SEATTLESEQ,SEQUENOM,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE, | 3 | 0.003894 |
CYBB | chrX | 37663233 | 37663234 | rs2228117 | + | G | A/G | single | coding-synon | 13 | 1000GENOMES,AFFY,CORNELL,HGSV,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,RSG_UW,SEATTLESEQ,SNP500CANCER,TISHKOFF,WIAF-CSNP, | 3 | 0.006435 |