Cobalamin Intron Data

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Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
LMBRD1	chr6	70501660	70501661	rs9446161	+	T	G/T	intron	5	1000GENOMES,BL,SC_SNP,SSMP,TISHKOFF,	2	0.074146
LMBRD1	chr6	70389053	70389054	rs9454867	+	A	A/G	intron	16	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.120104
LMBRD1	chr6	70389809	70389810	rs9454868	+	C	A/C	intron	8	1000GENOMES,AFFY,HGSV,KRIBB_YJKIM,PERLEGEN,SC_SNP,SSMP,TISHKOFF,	2	0.071921
LMBRD1	chr6	70420538	70420539	rs9454873	+	C	C/T	intron	5	1000GENOMES,BL,SC_SNP,SSMP,TISHKOFF,	2	0.93652
LMBRD1	chr6	70426620	70426621	rs9454876	+	G	A/G	intron	3	1000GENOMES,SC_SNP,SSMP,	2	0.071649
LMBRD1	chr6	70427922	70427923	rs9454877	+	G	A/G	intron	3	1000GENOMES,ILLUMINA-UK,SC_SNP,	2	0.026944
LMBRD1	chr6	70435751	70435752	rs9454878	+	G	G/T	intron	3	1000GENOMES,SC_SNP,TISHKOFF,	2	0.989899
LMBRD1	chr6	70455445	70455446	rs9454880	+	G	A/G	intron	6	1000GENOMES,BL,GMI,SC_SNP,SSMP,TISHKOFF,	2	0.069006
LMBRD1	chr6	70456782	70456783	rs9454881	+	G	A/G	intron	7	1000GENOMES,BL,GMI,PERLEGEN,SC_SNP,SSMP,TISHKOFF,	2	0.07069
LMBRD1	chr6	70458344	70458345	rs9454882	+	G	A/G	intron	3	1000GENOMES,SC_SNP,TISHKOFF,	2	0.06664
LMBRD1	chr6	70468790	70468791	rs9454887	+	A	A/G	intron	7	1000GENOMES,BL,GMI,PERLEGEN,SC_SNP,SSMP,TISHKOFF,	2	0.930417
LMBRD1	chr6	70475119	70475120	rs9454889	+	C	A/C	intron	6	1000GENOMES,BL,GMI,SC_SNP,SSMP,TISHKOFF,	2	0.068612
LMBRD1	chr6	70489307	70489308	rs9454890	+	A	A/G	intron	6	1000GENOMES,BL,GMI,SC_SNP,SSMP,TISHKOFF,	2	0.931782
LMBRD1	chr6	70494212	70494213	rs9454892	+	C	C/T	intron	8	1000GENOMES,BL,GMI,ILLUMINA,PERLEGEN,SC_SNP,SSMP,TISHKOFF,	2	0.903791
LMBRD1	chr6	70496060	70496061	rs9454893	+	C	C/T	intron	8	1000GENOMES,BL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.930556
MUT	chr6	49400794	49400795	rs9463480	+	G	G/T	intron	11	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,SC_SNP,SSMP,TISHKOFF,	2	0.69151
MUT	chr6	49407068	49407069	rs9463482	+	T	C/T	intron	10	1000GENOMES,ABI,BCMHGSC_JDW,BL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.516971
MUT	chr6	49409847	49409848	rs9463483	+	T	A/T	intron	10	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,GMI,PJP,SC_SNP,SSMP,	2	0.309937
MTR	chr1	236996116	236996117	rs946403	+	T	C/T	intron	18	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,YUSUKE,	2	0.44869
MUT	chr6	49409486	49409487	rs9473555	+	G	C/G	intron	13	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,PJP,SC_SNP,SSMP,	2	0.30698
MUT	chr6	49409736	49409737	rs9473557	+	T	C/T	intron	12	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,ENSEMBL,GMI,PJP,SC_SNP,SI_EXO,SSMP,	2	0.33005
MUT	chr6	49422847	49422848	rs9473559	+	T	A/T	intron	6	1000GENOMES,BCMHGSC_JDW,BGI,GMI,SC_SNP,SSMP,	2	0.236593
MUT	chr6	49427917	49427918	rs9473560	+	A	A/G	intron	14	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.681941
MUT	chr6	49428754	49428755	rs9473561	+	G	A/G	intron	15	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.320478
MTR	chr1	236980503	236980504	rs955516	+	T	A/T	intron	10	1000GENOMES,BCMHGSC_JDW,BUSHMAN,GMI,HGSV,ILLUMINA-UK,PJP,SSMP,TISHKOFF,TSC-CSHL,	2	0.360908
LMBRD1	chr6	70413327	70413328	rs960144	-	T	A/G	intron	19	1000GENOMES,ABI,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,YUSUKE,	2	0.462882
CUBN	chr10	17012097	17012098	rs9633766	+	C	C/T	intron	15	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.58477
CUBN	chr10	17094784	17094785	rs9663167	+	A	A/G	intron	7	1000GENOMES,BUSHMAN,GMI,HGSV,PJP,SC_SNP,WI_SSAHASNP,	2	0.820642
CUBN	chr10	17099604	17099605	rs9664265	+	C	C/T	intron	5	1000GENOMES,COMPLETE_GENOMICS,SSAHASNP,TISHKOFF,WI_SSAHASNP,	2	0.977982
CUBN	chr10	17094648	17094649	rs9664321	+	C	C/T	intron	5	1000GENOMES,COMPLETE_GENOMICS,HGSV,TISHKOFF,WI_SSAHASNP,	2	0.977106
CUBN	chr10	17094674	17094675	rs9664323	+	C	A/C	intron	10	1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,KRIBB_YJKIM,PJP,SC_SNP,TISHKOFF,WI_SSAHASNP,	2	0.069818
CUBN	chr10	17104172	17104173	rs9665553	+	G	A/G	intron	23	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WI_SSAHASNP	2	0.792917
CUBN	chr10	17033953	17033954	rs9733534	+	G	A/C/G	intron	16	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,	2	0.785779
LMBRD1	chr6	70391649	70391650	rs980587	-	C	A/G	intron	12	1000GENOMES,ABI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SSMP,TSC-CSHL,WI_SSAHASNP,	2	0.128666
CUBN	chr10	17015560	17015561	rs9888018	+	G	C/G	intron	3	1000GENOMES,BCM_SSAHASNP,TISHKOFF,	2	0.037456
LMBRD1	chr6	70481219	70481220	rs991973	+	C	C/T	intron	12	1000GENOMES,ABI,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA-UK,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHASNP,	2	0.897692
MMAB	chr12	110004996	110004997	rs9919738	+	G	A/G	intron	10	1000GENOMES,BCM_SSAHASNP,COMPLETE_GENOMICS,GMI,ILLUMINA,PJP,RSG_JCVI,SC_SNP,SSMP,TISHKOFF,	2	0.332569
LMBRD1	chr6	70481266	70481267	rs991974	+	G	G/T	intron	13	1000GENOMES,ABI,AFFY,BCM_SSAHASNP,BUSHMAN,COMPLETE_GENOMICS,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,SSMP,TISHKOFF,TSC-CSHL,	2	0.856082
CUBN	chr10	17135907	17135908	rs994714	-	A	C/T	intron	19	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,PERLEGEN,PJP,SEQUENOM,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.544987
CUBN	chr10	17135866	17135867	rs994715	-	G	C/T	intron	21	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,PERLEGEN,PJP,SC_JCM,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL,	2	0.10111
CUBN	chr10	16987840	16987841	rs9971057	+	C	C/T	intron	6	1000GENOMES,HGSV,ILLUMINA-UK,PJP,TISHKOFF,WUGSC_SSAHASNP,	2	0.980734
MMAA	chr4	146569256	146569257	rs9990503	+	T	C/T	intron	7	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,GMI,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.123168
MMAA	chr4	146542024	146542025	rs9998804	+	T	A/T	intron	3	1000GENOMES,BUSHMAN,WI_SSAHASNP,	2	0.012844

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Coblamin

Cobalamin Intron Data