Cobalamin Intron Data

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Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
MMAA	chr4	146565629	146565630	rs10009151	+	C	C/G	intron	5	1000GENOMES,COMPLETE_GENOMICS,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.971101
MMAA	chr4	146558085	146558086	rs10014853	+	A	A/C	intron	4	1000GENOMES,BUSHMAN,TISHKOFF,WI_SSAHASNP,	2	0.957242
MMAA	chr4	146542420	146542421	rs10029927	+	C	C/T	intron	10	1000GENOMES,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,PJP,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.77254
MMAA	chr4	146565404	146565405	rs10030540	+	G	C/G	intron	6	1000GENOMES,COMPLETE_GENOMICS,ILLUMINA,SSMP,TISHKOFF,WI_SSAHASNP,	2	0.027714
MTRR	chr5	7882915	7882916	rs10040859	+	A	A/G	intron	9	1000GENOMES,AFFY,BUSHMAN,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,TISHKOFF,WI_SSAHASNP,	2	0.946136
MTRR	chr5	7875930	7875931	rs10063972	+	T	G/T	intron	6	1000GENOMES,BUSHMAN,ILLUMINA,ILLUMINA-UK,TISHKOFF,WI_SSAHASNP,	2	0.022456
MTRR	chr5	7889851	7889852	rs10069646	+	A	A/G	intron	5	1000GENOMES,ILLUMINA-UK,PJP,TISHKOFF,WI_SSAHASNP,	2	0.965138
MTR	chr1	237050681	237050682	rs10158222	+	C	C/T	intron	13	1000GENOMES,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,KRIBB_YJKIM,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.703986
MTR	chr1	237050175	237050176	rs10158822	+	T	G/T	intron	16	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.212537
CUBN	chr10	17133942	17133943	rs10159546	+	T	C/T	intron	13	1000GENOMES,BCMHGSC_JDW,BL,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,SC_SNP,SSAHASNP,SSMP,TISHKOFF,WUGSC_SSAHASNP,	2	0.546989
LMBRD1	chr6	70395032	70395033	rs1031629	-	T	A/G	intron	5	ABI,GMI,ILLUMINA,PERLEGEN,TSC-CSHL,	2	0.560748
LMBRD1	chr6	70395024	70395025	rs1031630	-	C	G/T	intron	16	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA-UK,PJP,SC_JCM,SC_SNP,SSAHASNP,TISHKOFF,TSC-CSHL,YUSUKE,	2	0.4
LMBRD1	chr6	70442865	70442866	rs1031631	+	C	C/T	intron	24	1000GENOMES,ABI,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,TSC-CSHL	3	0.443158
CUBN	chr10	17141951	17141952	rs1033765	-	C	G/T	intron	22	1000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TSC-CSHL,WI_SSAHAS	2	0.319562
MTR	chr1	236959081	236959082	rs10399834	+	C	C/T	intron	6	1000GENOMES,BCM_SSAHASNP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,TISHKOFF,	2	0.969751
CUBN	chr10	17149146	17149147	rs10437541	+	T	G/T	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,	2	0.563355
MMACHC	chr1	45976586	45976587	rs1044717	+	A	A/G	intron,untranslated-3	26	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SNPS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,LEE,PERLEGEN,PJP,SI_EXO,SSAH	2	0.182715
MMADHC	chr2	150427191	150427192	rs10469768	+	C	C/T	intron	13	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,PJP,SC_SNP,SSAHASNP,SSMP,	2	0.348402
MTRR	chr5	7898093	7898094	rs10475399	+	A	A/G	intron	18	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,	2	0.509606
MTR	chr1	236961354	236961355	rs10495384	+	G	G/T	intron	9	1000GENOMES,AFFY,BUSHMAN,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,	2	0.903585
MTR	chr1	236961815	236961816	rs10495385	+	C	C/T	intron	8	1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,	2	0.924713
MTR	chr1	237032807	237032808	rs10495386	+	G	A/G	intron	9	1000GENOMES,AFFY,BUSHMAN,GMI,HGSV,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,	2	0.096537
MTR	chr1	237037256	237037257	rs10495387	+	C	A/C	intron	9	1000GENOMES,AFFY,BUSHMAN,COMPLETE_GENOMICS,HGSV,ILLUMINA,PERLEGEN,SSMP,TISHKOFF,	2	0.074087
LMBRD1	chr6	70456677	70456678	rs10498869	+	G	A/G	intron	7	1000GENOMES,AFFY,BL,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,	2	0.028484
CUBN	chr10	16910299	16910300	rs10508515	+	G	A/G	intron	6	1000GENOMES,AFFY,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,	2	0.021597
CUBN	chr10	16925847	16925848	rs10508516	+	T	C/T	intron	5	1000GENOMES,AFFY,PERLEGEN,SSMP,TISHKOFF,	2	0.028858
CUBN	chr10	16997890	16997891	rs10508517	+	G	A/G	intron	12	1000GENOMES,AFFY,BGI,BUSHMAN,COMPLETE_GENOMICS,EXOME_CHIP,GMI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,SSMP,TISHKOFF,	2	0.185591
CUBN	chr10	17041472	17041473	rs10508518	+	T	G/T	intron	15	1000GENOMES,AFFY,BL,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,PERLEGEN,PJP,RSG_JCVI,SSMP,TISHKOFF,	2	0.269591
CUBN	chr10	17082550	17082551	rs10508519	+	T	C/T	intron	6	1000GENOMES,AFFY,COMPLETE_GENOMICS,HGSV,PERLEGEN,TISHKOFF,	2	0.03614
CUBN	chr10	17126877	17126878	rs10508520	+	C	C/T	intron	15	1000GENOMES,ABI,AFFY,BUSHMAN,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSAHASNP,SSMP,TISHKOFF,	2	0.825847
CUBN	chr10	17161748	17161749	rs10508521	+	G	A/G	intron	12	1000GENOMES,ABI,BCM-HGSC-SUB,COMPLETE_GENOMICS,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,PERLEGEN,PJP,SSMP,TISHKOFF,	2	0.099122
MTRR	chr5	7899908	7899909	rs10520874	-	G	C/G	intron	9	1000GENOMES,AFFY,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA-UK,PERLEGEN,SSMP,TISHKOFF,	2	0.434298
CUBN	chr10	17169187	17169191	rs10550609	+	TC	-/TCT	intron	3	1000GENOMES,DEVINE_LAB,SSMP,	2	0.097796
CUBN	chr10	17169209	17169211	rs10550610	+	TT	-/TT	intron	3	1000GENOMES,DEVINE_LAB,LUNTER,	2	0.100092
CUBN	chr10	16994001	16994004	rs10553704	+	TG	-/TGT	intron	7	1000GENOMES,BCMHGSC_JDW,BUSHMAN,DEVINE_LAB,LUNTER,SSMP,TISHKOFF,	2	0.047248
MTR	chr1	236961267	236961268	rs10561343	+	C	-/C/C	intron	4	1000GENOMES,DEVINE_LAB,LUNTER,SSMP,	2	0.630395
CUBN	chr10	17086127	17086130	rs10561723	+	TA	-/TAT	intron	7	1000GENOMES,ABI,BUSHMAN,DEVINE_LAB,HGSV,HUMANGENOME_JCVI,PJP,	2	0.131531
MTR	chr1	237009685	237009688	rs10581765	+	AG	-/AGC	intron	4	1000GENOMES,DEVINE_LAB,LUNTER,SSMP,	2	0.110652
CUBN	chr10	16977118	16977120	rs10597460	+	AT	-/AT	intron	6	1000GENOMES,ABI,DEVINE_LAB,LUNTER,SSMP,TISHKOFF,	2	0.0955
LMBRD1	chr6	70464043	70464043	rs10674361	+	-	-/AG	intron	9	1000GENOMES,BILGI_BIOE,BL,BUSHMAN,DEVINE_LAB,GMI,HGSV,LUNTER,TISHKOFF,	2	0.58578
CUBN	chr10	17052656	17052656	rs10677407	+	-	-/AA	intron	2	1000GENOMES,DEVINE_LAB,	2	0.879706
CUBN	chr10	17052658	17052658	rs10677408	+	-	-/AA	intron	2	1000GENOMES,DEVINE_LAB,	2	0.885216
MMAA	chr4	146567648	146567649	rs1068	-	T	A/G	intron	19	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SSMP,TISHKOFF,WIAF,WI_SSAHASNP,	2	0.419022
CUBN	chr10	17102095	17102096	rs10709908	+	T	-/T	intron	11	1000GENOMES,ABI,BILGI_BIOE,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,	2	0.434862
CUBN	chr10	17025006	17025007	rs10714215	+	A	-/A	intron	11	1000GENOMES,BILGI_BIOE,BUSHMAN,DEVINE_LAB,GMI,HGSV,HUMANGENOME_JCVI,LUNTER,PJP,SSMP,TISHKOFF,	2	0.613657
MTR	chr1	236963866	236963867	rs10733117	+	G	A/G	intron	21	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,	2	0.549082
MTR	chr1	236964009	236964010	rs10733118	+	T	C/T	intron	20	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.671166
CUBN	chr10	17000798	17000799	rs10737015	+	T	A/T	intron	17	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA-UK,PJP,SC_SNP,SSMP,TISHKOFF,	2	0.69755
CUBN	chr10	16906507	16906508	rs10752062	+	T	C/T	intron	19	1000GENOMES,ABI,BGI,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,PERLEGEN,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,	3	0.560133
CUBN	chr10	16955197	16955198	rs10752063	+	T	G/T	intron	21	1000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,KRIBB_YJKIM,PJP,SC_SNP,SSAHASNP,SSMP,TISHKOFF,	2	0.730704

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Coblamin

Cobalamin Intron Data