Folate SNPS Near Gene 5' Data


Gene SymbolChromosomeStartEndrs IDStrandNCBI refObservedFunctionSubmitter CountSubmitterFrequency CountAllele Frequency
DHFR chr 57995040279950403rs10168-CA/Gnear-gene-5,unt71000GENOMES,ABI,CGAP-GAI,EGP_SNPS,LEE,SEQUENOM,TSC-CSHL,20.195057
DHFR chr 57995038979950390rs151182735+C-/Cnear-gene-5,unt41000GENOMES,LUNTER,SSMP,WARNICH_LAB,20.204775
DHFR chr 57995025679950257rs61736208+CC/Gnear-gene-5,mis1CORNELL,20.016129
FPGS chr 9130565266130565267rs10760502+AA/Gnear-gene-5,mis201000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,CGAP-GAI,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANGENOME_JCV20.234411
MAT2A chr 28576628185766282rs2028106-CC/Gnear-gene-5,unt51000GENOMES,ABI,ILLUMINA,PHARMGKB_PPII,TSC-CSHL,20.020181
MTHFD1L chr 6151186865151186866rs191863790+GC/Gnear-gene-5,unt11000GENOMES,20.024793
MTRR chr 578709727870973rs1801394+AA/Gnear-gene-5,mis291000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMIC20.572342
MTRR chr 578692347869235rs72716536+TC/Tnear-gene-5,unt91000GENOMES,BL,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SSMP,TISHKOFF,20.170937
SHMT2 chr 125762336157623361rs201782086+--/Anear-gene-5,ncR11000GENOMES,20.985308
SHMT2 chr 125762336257623363rs28365862+AA/Gnear-gene-5,ncR81000GENOMES,BGI,GMI,ILLUMINA,KRIBB_YJKIM,KYUGEN,SSMP,TISHKOFF,20.914863
SHMT2 chr 125762351857623519rs28365863+GA/Gnear-gene-5,ncR111000GENOMES,BUSHMAN,CLINSEQ_SNP,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KYUGEN,NHLBI-ESP,SSMP,TISHKOFF,20.03104
TCN2 chr 223100313731003138rs2240433+AA/Gnear-gene-5,unt211000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,20.460802
TCN2 chr 223100310331003104rs79083159+CC/Tnear-gene-5,unt21000GENOMES,ILLUMINA,20.989547