Folate Coding Synonymous Data

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Gene Symbol	Chromosome	Start	End	rs ID	Strand	NCBI ref	Observed	Function	Submitter Count	Submitter	Frequency Count	Allele Frequency
ABCB1	chr 7	87138644	87138645	rs1045642	-	A	A/C/T	coding-synon	39	1000GENOMES,AFFY,AFFY_GWHS,BGI,BUSHMAN,CCHMC-CAE-PGCORE,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SN	4	0.006619
ABCB1	chr 7	87179600	87179601	rs1128503	-	A	C/T	coding-synon	38	1000GENOMES,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CCHMC-CAE-PGCORE,CGM_KYOTO,CLINSEQ_SNP,CNG,COMPLETE_GENOMICS	2	0.615974
ABCB1	chr 7	87178771	87178772	rs35633772	-	G	C/T	coding-synon	3	CORNELL,PHARMGKB_AB_DME,PHARMGKB_PMT,	2	0.985714
ABCC1	chr 16	16138312	16138313	rs2230669	+	G	A/G	coding-synon	12	1000GENOMES,BCMHGSC_JDW,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SNPS,ENSEMBL,ILLUMINA,NHLBI-ESP,PH	2	0.037047
ABCC1	chr 16	16228241	16228242	rs2230671	+	G	A/C/G	coding-synon	29	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,CSHL-HAPMAP,EGP_SNPS,ENSEMBL	4	0.144414
ABCC1	chr 16	16196493	16196494	rs2230672	+	C	C/T	coding-synon	9	1000GENOMES,CORNELL,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SNP500CANCER,WICVAR,	2	0.987063
ABCC1	chr 16	16138321	16138322	rs246221	+	T	C/T	coding-synon	27	1000GENOMES,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SNPS,ENSEMBL,GMI,HGSV,	2	0.437174
ABCC1	chr 16	16208722	16208723	rs28364000	+	C	C/T	coding-synon	1	PHARMGKB_PHAT,	2	0.982759
ABCC1	chr 16	16184365	16184366	rs28364004	+	G	G/T	coding-synon	6	1000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PHAT,PHARMGKB_PMT,	2	0.983466
ABCC1	chr 16	16232379	16232380	rs35148086	+	C	C/T	coding-synon	14	1000GENOMES,BUSHMAN,CLINSEQ_SNP,CORNELL,EGP_SNPS,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PHARMGKB_AB_DME	2	0.98967
ABCC1	chr 16	16139713	16139714	rs35587	+	T	C/T	coding-synon	26	1000GENOMES,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SNPS,GMI,HGSV,ILLUMIN	2	0.423778
ABCC1	chr 16	16162018	16162019	rs35605	+	T	C/T	coding-synon	34	1000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EGP_SN	2	0.816155
ABCC1	chr 16	16235122	16235123	rs35980404	+	C	C/T	coding-synon	1	PHARMGKB_PMT,	2	0.833333
ABCC1	chr 16	16196568	16196569	rs61731704	+	G	A/G	coding-synon	1	CORNELL,	2	0.01282
ABCC1	chr 16	16103718	16103719	rs61731710	+	A	A/G	coding-synon	2	AFFY_DM3_1,CORNELL,	2	0.982759
ABCC1	chr 16	16103655	16103656	rs61731711	+	C	C/T	coding-synon	2	AFFY_DM3_1,CORNELL,	2	0.985714
ABCC1	chr 16	16130356	16130357	rs8187849	+	C	C/T	coding-synon	8	1000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PHARMGKB_PMT,SNP500CANCER,TISHKOFF,	2	0.988762
ABCC1	chr 16	16139719	16139720	rs8187853	+	G	A/G	coding-synon	11	1000GENOMES,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,CORNELL,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGK	2	0.026831
ABCC1	chr 16	16162038	16162039	rs8187858	+	C	C/T	coding-synon	13	1000GENOMES,BCMHGSC_JDW,CLINSEQ_SNP,EGP_SNPS,ENSEMBL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGK	2	0.953007
ABCC1	chr 16	16173220	16173221	rs8187863	+	C	C/T	coding-synon	10	1000GENOMES,CLINSEQ_SNP,CORNELL,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_PHAT,PHARM	2	0.984105
ABCC1	chr 16	16219728	16219729	rs9933640	+	C	C/T	coding-synon	11	1000GENOMES,BCM_SSAHASNP,CORNELL,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_AB_DME,PHARMGKB_PM	2	0.979285
ABCC2	chr 10	101606860	101606861	rs1137968	+	G	G/T	coding-synon	15	1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,LEE,NHLBI-ESP,PHARMGKB_AB_DME,PHARMGKB_PMT,S	2	0.944109
ABCC2	chr 10	101563784	101563785	rs17216198	+	C	C/T	coding-synon	9	1000GENOMES,APPLERA_GI,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_AB_DME,PHARMGKB_PMT,SNP50	2	0.988994
ABCC2	chr 10	101605454	101605455	rs17216275	+	C	C/T	coding-synon	9	1000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PHARMGKB_PMT,SEATTLESEQ,TISHKOFF,	2	0.985061
ABCC2	chr 10	101604206	101604207	rs3740066	-	C	A/G	coding-synon	31	1000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGM_KYOTO,CLINSEQ_SNP,CNG,COMPLETE_GENOMICS,CS	2	0.321572
ABCC2	chr 10	101591417	101591418	rs3740070	-	G	A/C/G	coding-synon	12	1000GENOMES,GMI,IKP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,PHARMGKB_PMT,RIKENSNPRC,	2	0.988571
ABCC2	chr 10	101605502	101605503	rs7899457	+	C	C/T	coding-synon	12	1000GENOMES,AFFY,CLINSEQ_SNP,CORNELL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_AB_DME,PHARMGKB_PMT,SNP	2	0.965903
ABCC2	chr 10	101610454	101610455	rs8187706	+	G	A/G	coding-synon	12	1000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,P	2	0.035233
ABCC2	chr 10	101610532	101610533	rs8187707	+	C	C/T	coding-synon	17	1000GENOMES,APPLERA_GI,BUSHMAN,CGM_KYOTO,CLINSEQ_SNP,CNG,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN	2	0.949523
ALDH1L1	chr 3	125872292	125872293	rs16837178	+	G	A/G	coding-synon,nc	14	1000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEG	2	0.077844
ALDH1L1	chr 3	125856694	125856695	rs2305230	+	C	A/C	coding-synon,nc	22	1000GENOMES,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,EN	2	0.233075
AMT	chr 3	49455329	49455330	rs11715915	+	C	C/T	coding-synon,nc	21	1000GENOMES,ABI,AFFY,APPLERA_GI,BL,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,	2	0.735943
ATIC	chr 2	216211603	216211604	rs112288749	+	A	A/G	coding-synon	4	1000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,NHLBI-ESP,	2	0.986865
BHMT	chr 5	78423734	78423735	rs56915878	+	A	A/G	coding-synon	5	1000GENOMES,CLINSEQ_SNP,CORNELL,NHLBI-ESP,PHARMGKB_PPII,	2	0.989594
BHMT	chr 5	78423620	78423621	rs60340837	+	C	C/T	coding-synon	8	1000GENOMES,CLINSEQ_SNP,CORNELL,GMI,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SSMP,	2	0.977975
CBS	chr 21	44480615	44480616	rs1801181	-	G	C/T	coding-synon	23	1000GENOMES,ABI,APPLERA_GI,BGI,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE	2	0.719665
CBS	chr 21	44485349	44485350	rs234706	+	G	A/G	coding-synon	28	1000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,CSHL-HAPMAP	3	0.264448
CD320	chr 19	8367358	8367359	rs2227289	-	G	C/G	coding-synon	15	1000GENOMES,APPLERA_GI,BCM_SSAHASNP,BGI,CLINSEQ_SNP,GENAISSANCE,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PERLE	2	0.868887
CD320	chr 19	8368793	8368794	rs2232783	-	C	G/T	coding-synon	17	1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BGI,BL,CLINSEQ_SNP,GENAISSANCE,HGSV,ILLUMINA,KRIBB_YJKIM,NHL	2	0.864939
CD320	chr 19	8368757	8368758	rs2232784	-	G	C/T	coding-synon	18	1000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BGI,BL,CLINSEQ_SNP,GENAISSANCE,HGSV,ILLUMINA,NHLBI-ESP,PERLE	2	0.869539
CUBN	chr 10	16967324	16967325	rs11254278	+	C	C/T	coding-synon	11	1000GENOMES,BGI,BL,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SC_SNP,SSMP,TISHKOFF,	2	0.98637
CUBN	chr 10	16994371	16994372	rs114958584	+	G	A/G	coding-synon	4	1000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF,	2	0.010401
CUBN	chr 10	17146589	17146590	rs12571671	+	A	A/G	coding-synon	14	1000GENOMES,ABI,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SEAT	2	0.934781
CUBN	chr 10	17113478	17113479	rs17432826	+	G	A/G	coding-synon	8	1000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP,	2	0.014264
CUBN	chr 10	17152993	17152994	rs1801223	-	G	C/T	coding-synon	19	1000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,N	4	0.03628
CUBN	chr 10	17113562	17113563	rs1801225	-	C	A/G	coding-synon	24	1000GENOMES,ABI,BCMHGSC_JDW,BGI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JC	2	0.343285
CUBN	chr 10	17088005	17088006	rs1801228	-	T	A/G	coding-synon	11	1000GENOMES,BGI,CLINSEQ_SNP,HGBASE,ILLUMINA,NHLBI-ESP,PERLEGEN,RSG_JCVI,SI_EXO,SSMP,YUSUKE,	2	0.967861
CUBN	chr 10	17024614	17024615	rs1801229	-	A	A/T	coding-synon	26	1000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPM	2	0.708202
CUBN	chr 10	16870911	16870912	rs1801232	-	G	A/C/G	coding-synon,mi	19	1000GENOMES,ABI,AFFY,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA	2	0.0705
CUBN	chr 10	16979660	16979661	rs1801234	-	T	A/G	coding-synon	26	1000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBAS	3	0.474833

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