Folate Coding Synonymous Data


Gene SymbolChromosomeStartEndrs IDStrandNCBI refObservedFunctionSubmitter CountSubmitterFrequency CountAllele Frequency
CUBN chr 101691897116918972rs1801241-AC/Tcoding-synon191000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NH20.185771
CUBN chr 101708715517087156rs1873469+GA/Gcoding-synon131000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SEATTLESEQ,SI_EX20.098406
CUBN chr 101699055116990552rs2271468+GA/Gcoding-synon131000GENOMES,AFFY,BGI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF,20.08031
CUBN chr 101694954916949550rs3740165-TA/Gcoding-synon131000GENOMES,BGI,BL,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF,WI_SSAHASNP,Y20.91081
CUBN chr 101713019817130199rs41289311+GA/Gcoding-synon81000GENOMES,BGI,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,RSG_JCVI,SI_EXO,SSMP,20.032441
CUBN chr 101715757117157572rs41289313+GA/Gcoding-synon91000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,RSG_JCVI,SI_EXO,SSMP,20.06451
CUBN chr 101698927116989272rs61841454+GA/Gcoding-synon91000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,ILLUMINA,NHLBI-ESP,SSMP,20.057037
CUBN chr 101688251716882518rs703064-TA/Gcoding-synon241000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HG20.313265
DHFR chr 57995071679950717rs201906899+CC/Tcoding-synon,un11000GENOMES,20.979339
DHFR chr 57995070779950708rs2405875+TC/Tcoding-synon,un31000GENOMES,SSMP,TSC-CSHL,20.218549
DMGDH chr 57832855978328560rs1805072-GC/Tcoding-synon201000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA,IL20.796173
DMGDH chr 57835163578351636rs2253262+AA/Ccoding-synon251000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAP20.3638
DMGDH chr 57834025678340257rs248385-CC/Gcoding-synon261000GENOMES,BCM-HGSC-SUB,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENO20.572749
DNMT1 chr 191026707610267077rs2228611-TA/Gcoding-synon271000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BGI,BL,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS30.475085
DNMT1 chr 191026559210265593rs2228613-GA/C/Gcoding-synon,mi111000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP,TISHKOFF,WIAF-30.06326
DNMT1 chr 191026531110265312rs721186+TC/Tcoding-synon231000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-20.989835
DNMT3A chr 22546950125469502rs2276598+CC/Tcoding-synon171000GENOMES,APPLERA_GI,BGI,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,N20.792311
DNMT3A chr 22553682625536827rs41284843+GA/Gcoding-synon61000GENOMES,BUSHMAN,CANCER-GENOME,NHLBI-ESP,SI_EXO,SSMP,20.084862
DNMT3A chr 22546962725469628rs77345627+CC/Tcoding-synon41000GENOMES,BUSHMAN,CLINSEQ_SNP,NHLBI-ESP,20.983865
DNMT3B chr 203138807631388077rs17123655+CC/Tcoding-synon81000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PERLEGEN,TISHKOFF,20.976115
DNMT3B chr 203138807931388080rs17123657+CC/Tcoding-synon101000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PERLEGEN,SEATTLES20.944407
DNMT3B chr 203138644831386449rs2424922+TC/Tcoding-synon261000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,EX20.64639
DNMT3B chr 203136794731367948rs6058885+CC/Tcoding-synon,in111000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SC_SNP,SEATTLESEQ,SI_EXO,SSMP,TISHKOF20.921428
DNMT3B chr 203138634631386347rs6058891+TC/Tcoding-synon241000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENS20.64577
DNMT3B chr 203138502731385028rs6119965+CC/Tcoding-synon71000GENOMES,APPLERA_GI,BUSHMAN,ILLUMINA,NHLBI-ESP,SC_SNP,TISHKOFF,20.985473
FOLH1 chr 114919741549197416rs144950409+AA/Gcoding-synon51000GENOMES,CLINSEQ_SNP,GMI,NHLBI-ESP,SSMP,20.914139
FOLH1 chr 114920731449207315rs182169-AC/Tcoding-synon,in161000GENOMES,ABI,BCMHGSC_JDW,BL,CLINSEQ_SNP,CSHL-HAPMAP,GMI,KWOK,NHLBI-ESP,SC_JCM,SSAHASNP,SSMP,TISHK40.011877
FOLH1 chr 114922188449221885rs202680-TA/Tcoding-synon,in131000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,GMI,KWOK,NHLBI-ESP,SC_JCM,SEATT20.646168
FOLH1 chr 114919648949196490rs202716+TC/Tcoding-synon111000GENOMES,ABI,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,GMI,KWOK,SC_JCM,SSMP,TISHKOFF,20.269073
FOLH1 chr 114920831849208319rs79155991+GA/Gcoding-synon,un61000GENOMES,CLINSEQ_SNP,EXOME_CHIP,GMI,NHLBI-ESP,TISHKOFF,20.016676
FOLR1 chr 117190669071906691rs61735636+CC/Tcoding-synon1CORNELL,20.820513
FPGS chr 9130565325130565326rs11554716+GA/Gcoding-synon,ne51000GENOMES,CGAP-GAI,NHLBI-ESP,SEATTLESEQ,SSMP,20.051394
FTCD chr 214755722147557222rs10432965+GA/Gcoding-synon121000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,GMI,ILLUMINA,NHLBI-ESP,PERLEGEN,SC_SNP,SEATTLESEQ,20.127509
FTCD chr 214755847247558473rs1047179-GC/Gcoding-synon221000GENOMES,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,CGAP-GAI,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,ENSEM20.505804
FTCD chr 214756577947565780rs138803850+GC/Gcoding-synon21000GENOMES,NHLBI-ESP,20.025253
FTCD chr 214757184447571845rs61729391+CC/Tcoding-synon71000GENOMES,COMPLETE_GENOMICS,CORNELL,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF,20.926111
FTCD chr 214755723247557233rs61735838+GA/Gcoding-synon1CORNELL,20.02
GIF chr 115960336359603364rs2867802+GA/Gcoding-synon111000GENOMES,ABI,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TSC-CSHL,20.012333
GIF chr 115961136159611362rs35792306+GA/Gcoding-synon91000GENOMES,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,20.062763
ITPA chr 2031939773193978rs8362+GA/Gcoding-synon,in251000GENOMES,ABI,BCM-HGSC-SUB,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUM20.393069
ITPA chr 2032040833204084rs9101+GA/Gcoding-synon,nc251000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BGI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSE20.271262
MAT1A chr 108203485382034854rs10788546+TC/Tcoding-synon261000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMA20.764657
MAT1A chr 108203484182034842rs10887711+AA/Gcoding-synon241000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMA20.229483
MAT1A chr 108204005182040052rs1143694-AC/Tcoding-synon271000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMIC20.79125
MAT1A chr 108203359382033594rs2993763+GA/Gcoding-synon281000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSH30.542278
MAT2A chr 28576971085769711rs1078004-CC/Gcoding-synon301000GENOMES,ABI,AFFY,BCM_SSAHASNP,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSE20.517224
MAT2B chr 5162940998162940999rs11546512+AA/Gcoding-synon111000GENOMES,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,EXOME_CHIP,GMI,ILLUMINA,NHLBI-ESP,PERLEGEN,PHARMG20.889281
MMAB chr 3129152088129152089rs140696-GC/Tcoding-synon191000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,EGP_SNPS,EXOME_CHIP,HGSV,ILL20.858708
MTFMT chr 156529726065297261rs34636936+CC/Tcoding-synon71000GENOMES,APPLERA_GI,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,20.983577
MTFMT chr 156529550465295505rs35477493+CC/Tcoding-synon81000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,SSMP,20.9764
MTHFD1L chr 6151336738151336739rs509474-CC/Gcoding-synon291000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,COMPLET20.572312
MTHFD2L chr 47506561975065620rs200740046-AG/Tcoding-synon2CLINSEQ_SNP,ILLUMINA,20.0595
MTHFR chr 11185489511854896rs2066462-GC/Tcoding-synon151000GENOMES,BUSHMAN,CGM_KYOTO,CLINSEQ_SNP,EGP_SNPS,HGBASE,IMCJ-GDT,MGC_GENOME_DIFF,NHLBI-ESP,PHARMGK20.910388
MTHFR chr 11186305611863057rs2066470-GC/Tcoding-synon231000GENOMES,APPLERA_GI,CGM_KYOTO,CLINSEQ_SNP,EGP_SNPS,GMI,HGBASE,HGSV,ILLUMINA,IMCJ-GDT,KRIBB_YJKIM,20.910381
MTHFR chr 11184805311848054rs34733339-TA/Gcoding-synon,un81000GENOMES,CLINSEQ_SNP,HGSV,ILLUMINA,ILLUMINA-UK,SNP500CANCER,SSMP,TISHKOFF,20.981475
MTHFR chr 11185445611854457rs4846051+GA/Gcoding-synon311000GENOMES,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BGI,BL,BUSHMAN,CGM_KYOTO,CLINSEQ_S20.89699
MTR chr 1237058827237058828rs1131449+CC/G/Tcoding-synon281000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-30.455829
MTR chr 1237058747237058748rs12030699+CC/Tcoding-synon91000GENOMES,BGI,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SC_SNP,SEATTLESEQ,SSMP,20.983051
MTR chr 1237058743237058744rs12070777+CA/Ccoding-synon171000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,N20.341709
MTR chr 1236992530236992531rs201822712+AA/Ccoding-synon1CLINSEQ_SNP,20.9485
MTR chr 1237054568237054569rs2229276+AA/Gcoding-synon201000GENOMES,AFFY,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,20.657908
MTRR chr 578972827897283rs12347-GC/Tcoding-synon261000GENOMES,ABI,APPLERA_GI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENO20.782141
MTRR chr 578781917878192rs161870+TC/Tcoding-synon231000GENOMES,ABI,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,20.216049
MTRR chr 578973187897319rs1802059+GA/Gcoding-synon231000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBA20.296916
MTRR chr 578892157889216rs2287779+GA/Gcoding-synon161000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_PPII,SEA20.04965
MTRR chr 578930047893005rs34172797-CA/Gcoding-synon81000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO,20.019431
MTRR chr 578929327892933rs35890938-AC/Tcoding-synon81000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO,20.018837
MTRR chr 578970607897061rs6874544+TC/Tcoding-synon121000GENOMES,ABI,APPLERA_GI,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,EXOME_CHIP,ILLUMINA,NHLBI-ES20.018671
SARDH chr 9136536678136536679rs129932+GA/Gcoding-synon261000GENOMES,ACEVAN,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENS20.536276
SARDH chr 9136535746136535747rs145913342+GA/Gcoding-synon21000GENOMES,NHLBI-ESP,20.011019
SARDH chr 9136573411136573412rs2073815-GC/Tcoding-synon281000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENS20.538768
SARDH chr 9136561366136561367rs2502740+GA/Gcoding-synon181000GENOMES,APPLERA_GI,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,ILLUMINA,KRI20.25616
SARDH chr 9136536792136536793rs2519123-CC/Gcoding-synon211000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,GMI,HGSV,20.568133
SARDH chr 9136561447136561448rs35013479+GA/Gcoding-synon41000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,20.014857
SARDH chr 9136595252136595253rs35457000+CC/Tcoding-synon51000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,TISHKOFF,20.984715
SARDH chr 9136599145136599146rs573904+CC/Tcoding-synon161000GENOMES,BCM-HGSC-SUB,BGI,BL,CLINSEQ_SNP,CORNELL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-20.776438
SHMT1 chr 171823213518232136rs116100382+GA/Gcoding-synon51000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,TISHKOFF,20.018245
SHMT2 chr 125762601757626018rs11557166+CC/Tcoding-synon,nc111000GENOMES,CGAP-GAI,CLINSEQ_SNP,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TISH20.976028
SHMT2 chr 125762658157626582rs2229716+GA/Gcoding-synon,nc111000GENOMES,BCM-HGSC-SUB,CGAP-GAI,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGE20.026497
SHMT2 chr 125762707357627074rs2229717+GG/Tcoding-synon,nc91000GENOMES,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,WICVAR,20.951922
SHMT2 chr 125762786157627862rs2229718+CC/Tcoding-synon,nc1WICVAR,20.962963
SLC19A1 chr 214695200546952006rs1051269-GC/Gcoding-synon81000GENOMES,CLINSEQ_SNP,ILLUMINA,KRIBB_YJKIM,LEE,NHLBI-ESP,PHARMGKB_AB_DME,SNP500CANCER,20.99
SLC19A1 chr 214695155546951556rs12659-AC/Tcoding-synon271000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GEN20.560144
SLC19A1 chr 214695086246950863rs79091853+CC/Tcoding-synon51000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SSMP,20.981272
SLC46A1 chr 172673172426731725rs35257694+GA/Gcoding-synon2APPLERA_GI,NHLBI-ESP,20.014706
SLC46A1 chr 172673228826732289rs61732735+GC/Gcoding-synon1CORNELL,20.986486
TCN1 chr 115962343259623433rs1042613-GC/Tcoding-synon201000GENOMES,AFFY,APPLERA_GI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,LEE,MG20.703753
TCN2 chr 223101339231013393rs35997415+CC/Gcoding-synon1APPLERA_GI,20.986842
TCN2 chr 223101339831013399rs76802001+GA/Gcoding-synon41000GENOMES,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,20.022846
TYMS chr 18662246662247rs3786362-AC/Tcoding-synon111000GENOMES,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PHARMGKB_AB_DME,SEATTLESEQ,SSMP,20.028828
TYMS chr 18658034658035rs77400748+AA/Gcoding-synon,in41000GENOMES,GMI,NHLBI-ESP,SSMP,20.977961