Cobalamin Coding Synonymous Data


Gene SymbolChromosomeStartEndrs IDStrandNCBI refObservedFunctionSubmitter CountSubmitterFrequency CountAllele Frequency
TCN1chr115962343259623433rs1042613-GC/Tcoding-synon201000GENOMES,AFFY,APPLERA_GI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,LEE,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGEN,SC_JCM,SEATTLESEQ,SNP500CANCER,SSMP,TISHKOFF,WI_SSAHASNP,20.703753
ABCD4chr147475952874759529rs1052000-GC/Tcoding-synon,ncRNA111000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,NHLBI-ESP,SEATTLESEQ,TISHKOFF,20.918756
MMABchr12110011228110011229rs10774774+GG/Tcoding-synon,near-gene-5,ncRNA141000GENOMES,CLINSEQ_SNP,CORNELL,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,KYUGEN,NHLBI-ESP,PJP,RSG_JCVI,SC_SNP,SEATTLESEQ,SSMP,20.692394
CUBNchr101696732416967325rs11254278+CC/Tcoding-synon111000GENOMES,BGI,BL,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SC_SNP,SSMP,TISHKOFF,20.98637
MTRchr1237058827237058828rs1131449+CC/G/Tcoding-synon281000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,CSHL-HAPMAP,ENSEMBL,GMI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,LEE,NHLBI-ESP,PERLEGEN,PJP,SC_JCM,SC_SNP,SEATTLE30.455829
CUBNchr101699437116994372rs114958584+GA/Gcoding-synon41000GENOMES,ILLUMINA,NHLBI-ESP,TISHKOFF,20.010401
MMADHCchr2150432975150432976rs11545261-CA/Gcoding-synon221000GENOMES,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BL,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA-UK,MGC_GENOME_DIFF,NHLBI-ESP,PJP,SEATTLESEQ20.780456
MMAAchr4146572226146572227rs11721553+GA/Gcoding-synon111000GENOMES,APPLERA_GI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,ROSENBLATT_LAB,SEATTLESEQ,SSMP,20.072523
ABCD4chr147475701874757019rs11845976+CC/Tcoding-synon,ncRNA151000GENOMES,ABI,APPLERA_GI,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,SEATTLESEQ,TISHKOFF,20.931957
MTRchr1237058747237058748rs12030699+CC/Tcoding-synon91000GENOMES,BGI,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SC_SNP,SEATTLESEQ,SSMP,20.983051
MTRchr1237058743237058744rs12070777+CA/Ccoding-synon171000GENOMES,BCMHGSC_JDW,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,ENSEMBL,EXOME_CHIP,GMI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SC_SNP,SEATTLESEQ,SI_EXO,SSMP,TISHKOFF,20.341709
MTRRchr578972827897283rs12347-GC/Tcoding-synon261000GENOMES,ABI,APPLERA_GI,BUSHMAN,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,LEE,NHLBI-ESP,PHARMGKB_PPII,PJP,SC_JCM,SEATTLESEQ,SI_E20.782141
CUBNchr101714658917146590rs12571671+AA/Gcoding-synon141000GENOMES,ABI,BUSHMAN,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF,20.934781
MTRRchr578781917878192rs161870+TC/Tcoding-synon231000GENOMES,ABI,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KWOK,NHLBI-ESP,PERLEGEN,PHARMGKB_PPII,PJP,SC_JCM,SEATTLESEQ,SNP500CANCER,SSMP,TISHKOFF,TSC-CSHL,WI_SSAHAS20.216049
MMACHCchr14597477545974776rs16832550+CC/Tcoding-synon81000GENOMES,CLINSEQ_SNP,EGP_SNPS,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,TISHKOFF,20.98183
CUBNchr101711347817113479rs17432826+GA/Gcoding-synon81000GENOMES,CLINSEQ_SNP,COMPLETE_GENOMICS,ILLUMINA,NHLBI-ESP,PERLEGEN,SI_EXO,SSMP,20.014264
FUT2chr194920672549206726rs1800027+CC/Tcoding-synon111000GENOMES,BL,CLINSEQ_SNP,CORNELL,HGBASE,ILLUMINA,NHLBI-ESP,PGA-UW-FHCRC,SEATTLESEQ,SSMP,TISHKOFF,20.94895
CUBNchr101715299317152994rs1801223-GC/Tcoding-synon191000GENOMES,AFFY,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,RSG_JCVI,SC_SNP,SEATTLESEQ,SI_EXO,SSMP,TISHKOFF,WIAF-CSNP,YUSUKE,40.03628
CUBNchr101711356217113563rs1801225-CA/Gcoding-synon241000GENOMES,ABI,BCMHGSC_JDW,BGI,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,NHLBI-ESP,PERLEGEN,PJP,RSG_JCVI,SC_SNP,SEATTLESEQ,SI_EXO,SSAHASNP,SSMP,TISHKOFF,WI_SSAHA20.343285
CUBNchr101708800517088006rs1801228-TA/Gcoding-synon111000GENOMES,BGI,CLINSEQ_SNP,HGBASE,ILLUMINA,NHLBI-ESP,PERLEGEN,RSG_JCVI,SI_EXO,SSMP,YUSUKE,20.967861
CUBNchr101702461417024615rs1801229-AA/Tcoding-synon261000GENOMES,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,PJP,RSG_JCVI,SC_JCM,SC_SN20.708202
CUBNchr101687091116870912rs1801232-GA/C/Gcoding-synon,missense191000GENOMES,ABI,AFFY,CLINSEQ_SNP,CSHL-HAPMAP,ENSEMBL,EXOME_CHIP,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA,NHLBI-ESP,PERLEGEN,PJP,RSG_JCVI,SC_SNP,SSAHASNP,SSMP,TISHKOFF,20.0705
CUBNchr101697966016979661rs1801234-TA/Gcoding-synon261000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,RSG_JCVI,SEATTLESEQ,SI_EXO,SSMP,TISHK30.474833
CUBNchr101691897116918972rs1801241-AC/Tcoding-synon191000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,HGBASE,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SEATTLESEQ,SI_EXO,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE,20.185771
MTRRchr578973187897319rs1802059+GA/Gcoding-synon231000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BGI,BL,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,ENSEMBL,GMI,HGBASE,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_PPII,PJP,SEATTLESEQ,SI_EXO,SNP500CANCER,20.296916
CUBNchr101708715517087156rs1873469+GA/Gcoding-synon131000GENOMES,BUSHMAN,CLINSEQ_SNP,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SEATTLESEQ,SI_EXO,SSMP,TISHKOFF,TSC-CSHL,20.098406
MTRchr1236992530236992531rs201822712+AA/Ccoding-synon1CLINSEQ_SNP,20.9485
MTRchr1237054568237054569rs2229276+AA/Gcoding-synon201000GENOMES,AFFY,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,GMI,HGSV,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,SC_JCM,SEATTLESEQ,SI_EXO,SSMP,TISHKOFF,WICVAR,YUSUKE,20.657908
MUTchr64942552049425521rs2229384-CA/Gcoding-synon231000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,BCMHGSC_JDW,BGI,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,GMI,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PJP,SC_SNP,SEATTLESEQ,SI_EXO,SSMP,TISH20.573702
CUBNchr101699055116990552rs2271468+GA/Gcoding-synon131000GENOMES,AFFY,BGI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SC_SNP,SEATTLESEQ,SSMP,TISHKOFF,YUSUKE,20.08031
MMACHCchr14597392745973928rs2275276+GA/Gcoding-synon231000GENOMES,ABI,AFFY,BCM-HGSC-SUB,BGI,BL,BUSHMAN,CLINSEQ_SNP,CORNELL,ENSEMBL,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PJP,SEATTLESEQ,SSAHASNP,SSMP,TISHKOFF,YUSUKE,20.473545
MTRRchr578892157889216rs2287779+GA/Gcoding-synon161000GENOMES,AFFY,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PHARMGKB_PPII,SEATTLESEQ,SI_EXO,SNP500CANCER,SSMP,TISHKOFF,YUSUKE,20.04965
ABCD4chr147476635174766352rs2301345-AC/Tcoding-synon,intron231000GENOMES,ABI,APPLERA_GI,BCM-HGSC-SUB,CANCER-GENOME,CGAP-GAI,CLINSEQ_SNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGEN,PJP,SEATTL20.283276
FUT2chr194920660249206603rs281377+CC/Tcoding-synon251000GENOMES,ABI,APPLERA_GI,BCMHGSC_JDW,BCM_SSAHASNP,COMPLETE_GENOMICS,CSHL-HAPMAP,ENSEMBL,GMI,HGBASE,HGSV,HUMANGENOME_JCVI,ILLUMINA,ILLUMINA-UK,KRIBB_YJKIM,KWOK,LEE,NHLBI-ESP,PGA-UW-FHCRC,PJP,SC_JCM,S20.558775
FUT2chr194920656049206561rs28362836+CC/Tcoding-synon51000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,PGA-UW-FHCRC,20.982573
GIFchr115960336359603364rs2867802+GA/Gcoding-synon111000GENOMES,ABI,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,TSC-CSHL,20.012333
MTRRchr578930047893005rs34172797-CA/Gcoding-synon81000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO,20.019431
LMBRD1chr67042365070423651rs34327883-GC/Tcoding-synon71000GENOMES,APPLERA_GI,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,SEATTLESEQ,TISHKOFF,20.988871
MMAAchr4146560428146560429rs34702224-TA/Gcoding-synon41000GENOMES,APPLERA_GI,ILLUMINA,NHLBI-ESP,20.985895
ABCD4chr147476634074766341rs35417609+AA/Gcoding-synon,intron61000GENOMES,APPLERA_GI,BUSHMAN,ILLUMINA,NHLBI-ESP,TISHKOFF,20.986923
GIFchr115961136159611362rs35792306+GA/Gcoding-synon91000GENOMES,APPLERA_GI,CLINSEQ_SNP,GMI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,SEATTLESEQ,SSMP,20.062763
MTRRchr578929327892933rs35890938-AC/Tcoding-synon81000GENOMES,APPLERA_GI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,PHARMGKB_PPII,SI_EXO,20.018837
ABCD4chr147476308574763086rs36031534+GC/Gcoding-synon,ncRNA111000GENOMES,APPLERA_GI,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ,TISHKOFF,20.068139
CUBNchr101694954916949550rs3740165-TA/Gcoding-synon131000GENOMES,BGI,BL,BUSHMAN,CLINSEQ_SNP,GMI,ILLUMINA,NHLBI-ESP,SEATTLESEQ,SSMP,TISHKOFF,WI_SSAHASNP,YUSUKE,20.91081
CUBNchr101713019817130199rs41289311+GA/Gcoding-synon81000GENOMES,BGI,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,RSG_JCVI,SI_EXO,SSMP,20.032441
CUBNchr101715757117157572rs41289313+GA/Gcoding-synon91000GENOMES,BGI,BUSHMAN,CLINSEQ_SNP,ILLUMINA,NHLBI-ESP,RSG_JCVI,SI_EXO,SSMP,20.06451
ABCD4chr147475930074759301rs4148078-GA/Ccoding-synon,ncRNA181000GENOMES,ABI,AFFY,APPLERA_GI,BCM-HGSC-SUB,CANCER-GENOME,CLINSEQ_SNP,COMPLETE_GENOMICS,GMI,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PERLEGEN,RIKENSNPRC,SEATTLESEQ,SSMP,TISHKOFF,20.280855
FUT2chr194920720549207206rs485186-AC/Tcoding-synon231000GENOMES,ABI,BCM-HGSC-SUB,BCMHGSC_JDW,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,NHLBI-ESP,PERLEGEN,PGA-UW-FHCRC,PJP,SC_JCM,SEATTLESEQ,20.44739
FUT2chr194920641649206417rs492602-AC/Tcoding-synon251000GENOMES,ABI,BCM-HGSC-SUB,BCM_SSAHASNP,BUSHMAN,CLINSEQ_SNP,COMPLETE_GENOMICS,CORNELL,ENSEMBL,EXOME_CHIP,GMI,HGSV,HUMANGENOME_JCVI,ILLUMINA,KRIBB_YJKIM,MGC_GENOME_DIFF,NHLBI-ESP,PAGE_STUDY,PERLEGEN,20.429728
ABCD4chr147475493574754936rs57773157+GA/Gcoding-synon,ncRNA101000GENOMES,BUSHMAN,CANCER-GENOME,CLINSEQ_SNP,HGSV,ILLUMINA,ILLUMINA-UK,NHLBI-ESP,SEATTLESEQ,TISHKOFF,20.067124